FC929854

Overview
NameFC929854
Unique NameFC929854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_RHOS1 (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 110/213 (51.64%), Postives = 139/213 (65.26%), Query Frame = 3
Query:   75 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            IDGKA A  +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP + SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+    T+ G  AVVVGRSNIVG P++ LLL    TVTI HS T D  ++ R ADI++AA G+  MI
Sbjct:    6 IDGKAFAAGVRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMASFEHRLPAETSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTIAHSRTRDLAAVCRGADILVAAVGRPEMI 216          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_PHOLL (Bifunctional protein folD OS=Photorhabdus luminescens subsp. laumondii GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 110/216 (50.93%), Postives = 137/216 (63.43%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A IIDGK +AQTIRSE+A  V+       + PGLAVV+VG    SQ YV+ KR+AC EVG  S   DLP+  SEAEL++ + +LN   D+ GILVQLPLP  I+  KVL  I  +KDVDGFHP NIG+L    R P   PCTP+G   LL+R G+   G  AV++G SNIVG P+SL LL A  T T+ H  T D    V +AD++I A G+   I
Sbjct:    3 AKIIDGKTIAQTIRSEVAVRVQQRVAAGRRAPGLAVVLVGENPASQIYVASKRRACEEVGFVSRSYDLPDTTSEAELLNLIDQLNNDSDIDGILVQLPLPAGIDNVKVLERIQPDKDVDGFHPYNIGRLCQ--RAPKLRPCTPRGIATLLERCGINTYGLNAVIIGASNIVGRPMSLELLLAGCTTTVTHRFTKDLRHHVEQADLLIVAVGKPNFI 216          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_PHEZH (Bifunctional protein folD OS=Phenylobacterium zucineum (strain HLK1) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 111/217 (51.15%), Postives = 144/217 (66.36%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMIK 716
            A IIDGK +A+ +R ++A+EV  L   Y   PGLAVV+VG    SQ YV  K +    VG+ S    LP    + EL+  V ELNA P +HGILVQLPLPKH++E+ V+  IS +KDVDG H +N G+LA     P  +PCTP GCL +L+ +   + GKRAVVVGRS +VG PV+ LLL+AD TVTI HS T D  ++ READI++AA G+  MI+
Sbjct:    3 AKIIDGKVLAERLRGQVADEVARLRADYRLQPGLAVVLVGEDPASQVYVRSKGEHSLAVGMHSVTHRLPADTRQDELLRLVAELNADPLIHGILVQLPLPKHLDEKAVIAAISPDKDVDGLHVVNAGRLA--SGLPALVPCTPLGCLIMLRETLGDLTGKRAVVVGRSLLVGKPVAQLLLQADCTVTIAHSRTVDLPAVCREADILVAAVGRPRMIR 217          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_NOVAD (Bifunctional protein folD OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 106/217 (48.85%), Postives = 143/217 (65.90%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMIK 716
            A +IDGKA A T+R  + +       + G+  GLAVV+VG    SQ YV  K K+  E G+ SF+  LP   +EA+L++ V +LNA P V GILVQLPLP+H++E+KV+  I+ +KDVDGFH +N G+LA+    P F+PCTP GCL LLK     + G  AVV+GRSNIVG P++ LL+    TVT+ HS T +   +VR ADIV+AA G+  M+K
Sbjct:    3 AAVIDGKAFAATLRGRVGDLATAFEARAGRKAGLAVVLVGEDPASQVYVRSKGKSTLEAGMASFEHKLPADTAEADLLAVVEQLNADPAVDGILVQLPLPRHMDEQKVIAAINPDKDVDGFHVINAGRLAV--GQPGFVPCTPLGCLMLLKDRLGDLSGLDAVVIGRSNIVGKPMAQLLIAESCTVTVAHSRTKNLPEVVRRADIVVAAVGRPEMVK 217          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_HALOH (Bifunctional protein folD OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 111/215 (51.63%), Postives = 144/215 (66.98%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMIK 716
            IIDGK +A  IR+E+ EEV+  +E+ G+ PGL+VV+VG    S++YV MK K   E+GI S    L  Q ++ EL+  V +LN    + GILVQLPLP HI+E+ V+  IS  KDVDGFHP+N GKL        F  CTP G +ELL R G+ I GK+AVVVGRSNIVG PV+ LLL+  ATVT+ HSHT D     R+ADI++ AAG+  ++K
Sbjct:    4 IIDGKKIASEIRNELKEEVKKFTEE-GRPPGLSVVLVGDDPASRTYVRMKEKVAKEIGIYSKVDYLSRQTTQDELLDIVDKLNNDEKIDGILVQLPLPDHIDEKAVIEAISPFKDVDGFHPINTGKLFSGMTGQRFEACTPLGIIELLDREGIEIDGKKAVVVGRSNIVGKPVAHLLLERHATVTVCHSHTADLGIETRQADILVVAAGRPKLVK 217          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACCQ (Bifunctional protein folD OS=Bacillus cereus (strain Q1) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACC7 (Bifunctional protein folD OS=Bacillus cereus (strain AH187) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACC1 (Bifunctional protein folD OS=Bacillus cereus (strain ATCC 10987) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACHK (Bifunctional protein folD OS=Bacillus thuringiensis subsp. konkukian GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACCZ (Bifunctional protein folD OS=Bacillus cereus (strain ZK / E33L) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLTEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
The following BLAST results are available for this feature:
BLAST of FC929854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_RHOS11.122e-5051.64Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]
FOLD_PHOLL1.122e-5050.93Bifunctional protein folD OS=Photorhabdus luminesc... [more]
FOLD_PHEZH1.122e-5051.15Bifunctional protein folD OS=Phenylobacterium zuci... [more]
FOLD_NOVAD1.122e-5048.85Bifunctional protein folD OS=Novosphingobium aroma... [more]
FOLD_HALOH1.122e-5051.63Bifunctional protein folD OS=Halothermothrix oreni... [more]
FOLD_BACCQ1.122e-5049.54Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC71.122e-5049.54Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC11.122e-5049.54Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACHK1.465e-5049.54Bifunctional protein folD OS=Bacillus thuringiensi... [more]
FOLD_BACCZ1.465e-5049.54Bifunctional protein folD OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34001B06EF PostHarvC1 Citrus clementina cDNA clone C34001B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929854 ID=FC929854; Name=FC929854; organism=Citrus clementina; type=EST; length=717bp
GGAGCAATTAATTAGAGTTATCCATCTCTAGTTCTAGAATAATGGCGGCA
CCGTCAGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGAC
CATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATG
GCAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCT
CAAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAA
GTCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCA
GCAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTT
CAACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGAT
AAGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGC
TCGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGA
TGCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGC
TGTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGC
TGCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGAT
CCTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACA
AAGCATGATGATCAAGG
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