FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 96/243 (39.51%), Postives = 137/243 (56.38%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV-------DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+EY E +  ++   ++ +  R ++ FEDF   NA  +L+ YGT + VFNDD+QGT +VVLA + S +K  G  L DQ  +  GAG AG GIA+ I  +        LE+   +IW +D  GL+    ++ L+ F+ P+A     +   V       DA+    PTIL+G S     FTKEVVEAM +  + P+IF LSNPTS+ E    +   WS GRA+ A+GSP  P E+ +  +V GQA
Sbjct:  214 GREYDEFVSRYIETAQRLF-PRAILHFEDFGPANARKILDTYGTDYCVFNDDMQGTGAVVLAAVYSGLKVTGIPLRDQTIVVFGAGTAGMGIADQIR-DAMVADGATLEQAVSQIWPIDRPGLLFDD-MDDLRDFQVPYAKNRHQLGVAVGDRVGLSDAIKIASPTILLGCSTVYGAFTKEVVEAMTASCKHPMIFPLSNPTSRMEAIPADVLAWSNGRALLATGSPVAPVEFDETTYVIGQA 453          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 93/230 (40.43%), Postives = 132/230 (57.39%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV---------SSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            EY   + +F+ AVKQ +   +L+QFEDF   NA  LLE+Y      FNDDIQGTA+V L  LI+A +  G  L++Q+ +FLGAG AG GIAE I   +  +  +  E+ R ++++VD  GL+           S+L   +   K W  + + +  L+D V   KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T  +   W+ G A+ A+GSPF P
Sbjct:  222 EYYAFVDDFIQAVKQRW-PNVLLQFEDFAQKNAMPLLERYRDEICCFNDDIQGTAAVTLGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAWMRTEGGLSDEQARARVFMVDRFGLLTDNMPNLLSFQSKLVQKRDSLKGWDTQSDSI-SLLDVVRNAKPDILIGVSGQTGLFTEEIIREMHKHCARPIVMPLSNPTSRVEATPHDILNWTDGAALVATGSPFQP 449          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 90/246 (36.59%), Postives = 141/246 (57.32%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE----------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+ Y   +  ++ A  + +  + L+ +ED  N NA ++++KY    L FNDDIQGT ++ LAG+++AMK  G S+ DQR +  GAG AG GIA+ I  +      +  EE  K+ + +D +GL+    +E +  F+KP+    + VK+            + V   KPTILIGTSG    FT+E+V+ MAS  ++P+I  +SNPT  +E   E+ + W+ G+ + A+GSPFD  EY    +  GQ+
Sbjct:  240 GERYEAFIDAYVKAALKFF-PKALLHWEDLGNKNARNIMKKYNHEILTFNDDIQGTGAITLAGVLAAMKKTGASIKDQRVVIFGAGSAGIGIADQIR-DTMVLAGLSEEEANKRFYTLDYRGLLTED-IEGILDFQKPYLRNADEVKDWKRDEKGQIPFDEVVRQAKPTILIGTSGVSGAFTEEIVKEMASHVDRPVIMPMSNPTHLAEAVPEDLFKWTDGKVLIATGSPFDNVEYNGVSYEIGQS 482          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERPY (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERPS (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERPP (NAD-dependent malic enzyme OS=Yersinia pestis (strain Pestoides F) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERPN (NAD-dependent malic enzyme OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERPE (NAD-dependent malic enzyme OS=Yersinia pestis GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERPB (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERPA (NAD-dependent malic enzyme OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAOX_MYCTU3.038e-4039.51Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MAO1_ENTS83.038e-4040.43NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO2_BACSU5.182e-4036.59Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAO1_YERPY5.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPS5.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPP5.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pestis (str... [more]
MAO1_YERPN5.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pestis bv. ... [more]
MAO1_YERPE5.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pestis GN=s... [more]
MAO1_YERPB5.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPA5.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pestis bv. ... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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