FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERP3 (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +    ++  R +I++VD  GL+ + +L +L  F+     +         H     L+D V   KPT+LIG SGQ   FT+E++  M S   +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMSEGLSEIQ-ARARIFMVDRFGLL-TDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_YERE8 (NAD-dependent malic enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 94/240 (39.17%), Postives = 136/240 (56.67%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY   + EF+ AVK+ +   +L+QFEDF  +NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +  +  E+ R ++++VD  GL+ + +L +L  F+     + + ++          L D V   KPT+LIG SGQ   FT+E++  M     +PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y + ++
Sbjct:  220 GDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQNNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMISE-GLSEEQARARVFMVDRFGLL-TDKLPNLLDFQSKLVQKSDALQSWNLTSDSISLQDVVRNAKPTVLIGVSGQPGLFTEELIREMHKHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFSPVSYKEKLY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 96/234 (41.03%), Postives = 143/234 (61.11%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-----EHEPVKELVDAVNAIKP---TILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY 682
            G+EY E +  F+ AVK+ + E +L+QFEDF   NA  LL KY      FNDDIQGTA+V +  LI+A +  G  L+DQR  FLG+G AG GIA+ I  ++ ++  +  E+ R+++++VD  GL+ + ++ +LQ F++P         H  +   +     IK    ++L G SGQ   FT+EVVE++ +  + PI+  LSNPTS+ E T ++  TWS G+AI A+GSPF P  Y
Sbjct:  216 GEEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSGSAGCGIAQHIVRQMQRE-GLTQEQARQRVFMVDRYGLL-TDQMTNLQAFQQPLIQYTKDLSHWDISSHIGLEQVIKQGNISVLFGVSGQPGLFTQEVVESLCANVDHPIVLPLSNPTSRVEATPKDITTWSHGQAIVATGSPFPPTLY 446          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SODGM (NAD-dependent malic enzyme OS=Sodalis glossinidius (strain morsitans) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40
Identity = 93/235 (39.57%), Postives = 136/235 (57.87%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV---------SSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY 682
            G++Y + +  F+ AVK+ +   +L+QFEDF   NA  LL +Y +    FNDDIQGTA+V L  L++A +  G  L DQ+ +FLGAG AG GIAE I  E+ +   +  +E R+++ +VD  GL+           SRL         W  + + +  L D V   +PT+LIG SGQ   FT+E++  M    E+PI+  LSNPTS+ E T E+   W+ G A+ A+GSPF P ++
Sbjct:  220 GEQYDKFVDAFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRSELCCFNDDIQGTAAVTLGCLLAASRAAGKRLRDQKVVFLGAGSAGCGIAEQITAEM-RTEGLSEDEARRRVLMVDRFGLLTDKLANLLDFQSRLVQPSDSLSDWQLDSDTI-SLQDVVRNARPTVLIGVSGQPGLFTEEIIRDMHQHCERPIVMPLSNPTSRVEATPEDLLRWTDGAALVATGSPFAPVQF 451          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40
Identity = 90/238 (37.82%), Postives = 144/238 (60.50%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY E L +F+ AV + +   +++QFEDF   NA  LL +Y      FNDDIQGTASV +  L++A +  G  L++Q+ +F+GAG AG GIAE I ++++ +  +  E+ +++I++VD  GL++ + ++ L+ F++  A +   +           L+D ++  +P ILIG SGQ   FT++V+  MA   E+PIIF LSNP+   E    +   WS+G+AI A+GSPF   EY   ++
Sbjct:  219 EYDEFLDKFIKAVTRRW-PGVMLQFEDFAQPNAMPLLRRYRDEVCCFNDDIQGTASVTVGTLLAACRQKGKKLSEQKVVFVGAGSAGCGIAEQIMIQMTAE-GLTEEQAKRQIFMVDRFGLVMDT-MDGLRDFQQALAQKTSDLNAWEYSGEYPSLLDVMHCAEPDILIGVSGQAGLFTEQVISTMAKNVERPIIFPLSNPSKHVEAHPADVLKWSEGKAIVATGSPFGEVEYDGRIY 453          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.154e-39
Identity = 95/232 (40.95%), Postives = 135/232 (58.19%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI---------VSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G +Y   + EF+ AV++ + +  LIQFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L+DQR  FLGAG AG GIAE I  ++  +  +  E+ R ++++VD  GL+            RL       K W +E      L+D ++  KPTILIG SG    F++EV++ M    ++PI+F LSNPTS+ E T  +   W+ G A+ A+GSPF+P
Sbjct:  217 GPDYDAFVEEFIQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKDRICCFNDDIQGTAAVTVGSLLAACKAAGTKLSDQRITFLGAGSAGCGIAEAIIAQMVSE-GISDEKARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKFDNTKKWENEGNGF-SLLDVMHNAKPTILIGVSGAPGLFSEEVIKEMHKHCKRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFEP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39
Identity = 95/229 (41.48%), Postives = 136/229 (59.39%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD---QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY 682
            G+E+   + E+++A+   + + + IQFEDF+  NA DLL KY     +FNDDIQ T ++ LA +++ M+  GG+ AD   + FL LGAG +G G+ E I ++         EE   + ++ D KGL+   R + L   +     E E  K   + +  IKPT L+G S   + F KE++  +AS  EKP IF LSNPTS+SECTAEEA  ++ G  IFASGSPFDP E+
Sbjct:  250 GEEFHAFVDEWVSAITDRFPKAV-IQFEDFMMPNALDLLLKYKDQICMFNDDIQSTGAITLASVLATMRARGGTFADIKKETFLCLGAGSSGVGVCETI-VDCIVAEGATREEAYAQFYMFDHKGLLGKGRDDLLPSQQVFMRKEIEGGKTPAELLKKIKPTCLLGLSTCPKLFNKEMLSYVASYCEKPGIFPLSNPTSRSECTAEEAVEFTDGNLIFASGSPFDPVEW 476          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.387e-39
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFE 679
            G+EY + +  F+ AV++ + + +L+QFEDF   NA  LLEKY      FNDDIQGTASV +  L++A K    +L  Q+ +F+GAG AG GIAE I +   +   +   E RK+I++VD  GL+  S +++L  F+K           W    E   +L+D V     T++IG SGQ   FT++V+  +     KP++  LSNPTS+ E T EE   W+ G A+ A+GSPF P E
Sbjct:  217 GKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCGIAEHI-IAAMRIEGLSESEARKRIFMVDRFGLLTES-MDNLLDFQKRLAQKTADVSGWTAGSEAFPQLLDVVTHAGATVMIGVSGQRGLFTEQVIRELHKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVE 448          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.387e-39
Identity = 89/230 (38.70%), Postives = 136/230 (59.13%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            EY + + + + A+K  + + +L+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +I ++  +  EE R+++++VD  GL+    + +L  F+     + E ++          L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T +   +W+ G A+ A+GSPF P
Sbjct:  222 EYYQFVDDVIQAIKARWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRGAGSQLSEQKIVFLGAGSAGCGIAEQIIAQIVRE-GLSEEEARQRVFMVDRFGLLTDG-MPNLLPFQNKLVQKREQLQSWDTTSEALSLLDVVRNVKPNILIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQNILSWTDGEALVATGSPFSP 448          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.729e-39
Identity = 93/239 (38.91%), Postives = 140/239 (58.58%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE--------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            GQEY + + EF+ AVK  +    LIQFEDF   NA  LL +Y      FNDDIQGTA+V +  L++A K  G  L++QR  F+GAG AG GIAE I  ++  +  +     R +I++VD  GL+ +  +++L  F++  A +   V +        L+D V+  KPT+LIG  G    F++EV+  M +  ++PI+  LSNPTS+ E T  +   W++G A+ A+GSPFDP  + +  +
Sbjct:  217 GQEYDDFVEEFIQAVKSRW-PNALIQFEDFAQKNAMPLLNRYKDKVCCFNDDIQGTAAVTVGSLLAACKAAGSELSEQRITFVGAGSAGCGIAEAIVAQMIAE-GLSDSAARARIFMVDRWGLL-TDNMQNLLDFQQKLAQKSATVSQWNETGNISLLDVVSNGKPTVLIGVPG---LFSQEVIMEMHAHCKRPIVLPLSNPTSRVEATPSDIIRWTEGDALIATGSPFDPVIFNEKTY 449          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAO1_YERP35.182e-4040.00NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERE85.182e-4039.17NAD-dependent malic enzyme OS=Yersinia enterocolit... [more]
MAO1_PSYIN5.182e-4041.03NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_SODGM6.768e-4039.57NAD-dependent malic enzyme OS=Sodalis glossinidius... [more]
MAO1_IDILO8.839e-4037.82NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAO1_VIBHB1.154e-3940.95NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAOH_NEOFR3.359e-3941.48Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_PSEU24.387e-3940.00NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_KLEP74.387e-3938.70NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO12_PHOPR5.729e-3938.91NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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