FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39
Identity = 92/243 (37.86%), Postives = 143/243 (58.85%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD---QRFLFLGAGEAGTGIAELIALEISK---QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE--------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMA-SLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD 688
            G+EY E++ EFM AV   +   +++QFEDF +  AF LL++Y   + +FNDDIQGTA V +AGL+ A++  G  + D    + +  GAG AG G+       +++    T +  E  R + W+VD+KGLI  +R E++    +P+A + + ++         L + V  +KP +L+G S  G  F+KEV+EA+  S + +P IF +SNPT  +ECT EEA++      IFASGSPF   + G+
Sbjct:  262 GEEYIEVIDEFMEAVFTRW-PHVIVQFEDFQSKWAFKLLQRYRNNYRMFNDDIQGTAGVAIAGLLGAVRAQGRPMIDFPKMKIVVAGAGSAGIGVLNAARKTMARMLGNTEIAFESARSQFWVVDAKGLITEAR-ENVDPDARPFARKIKEIERQGLSEGATLAEVVREVKPDVLLGLSACGGLFSKEVLEALKHSTSTRPAIFPMSNPTRNAECTPEEAFSILGENIIFASGSPFKDVDLGN 502          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39
Identity = 92/242 (38.02%), Postives = 137/242 (56.61%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G +Y + + +F+   +  +   + + +EDF   NA ++L  Y      FNDDIQGT  VVLAG++ A+K  G  L DQ ++  GAG AG GI + +  E+ +Q  +  EE +K  +LVD +GL+     + L   +KP+A +    K       L  AV A+ PTIL+GTS    +FT+E+V+ M+   E+PIIF +SNPT  +E  AE+   WS G+A+  +G P D  EY  N +  GQA
Sbjct:  209 GDKYYDFIDKFVNHAESLF-PNLYLHWEDFGRSNASNILNSYKDKIATFNDDIQGTGIVVLAGVLGALKISGQKLTDQTYMSFGAGTAGMGIVKQLHEEMVEQ-GLSDEEAKKHFFLVDKQGLLFDDDPD-LTPEQKPFAAKRSDFKNANQLTNLQAAVEAVHPTILVGTSTHPNSFTEEIVKDMSGYTERPIIFPISNPTKLAEAKAEDVLKWSNGKALIGTGVPVDDIEYEGNAYQIGQA 447          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39
Identity = 91/232 (39.22%), Postives = 131/232 (56.47%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI---------VSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G +Y   + EFM AV++ + +  LIQFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L+ QR  FLGAG AG GIAE I  ++  +  +  E+ R ++++VD  GL+            RL   +   + W  E+     L D +   KPT+L+G SG    F++E+++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP
Sbjct:  217 GPDYDNFVEEFMQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKNRVCCFNDDIQGTAAVTVGSLLAACKAAGSQLSQQRITFLGAGSAGCGIAEAIIAQMVSE-GISDEQARSQVYMVDRWGLLEEGMPNLLDFQQRLVQKKANTQHWTTENNGY-SLHDVIRNAKPTVLVGVSGAPGLFSEEIIKEMHQHCPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39
Identity = 91/232 (39.22%), Postives = 131/232 (56.47%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI---------VSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G +Y   + EFM AV++ + +  LIQFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L+ QR  FLGAG AG GIAE I  ++  +  +  E+ R ++++VD  GL+            RL   +   + W  E+     L D +   KPT+L+G SG    F++E+++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP
Sbjct:  217 GPDYDNFVEEFMQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKNRVCCFNDDIQGTAAVTVGSLLAACKAAGSQLSQQRITFLGAGSAGCGIAEAIIAQMVSE-GISDEQARSQVYMVDRWGLLEEGMPNLLDFQQRLVQKKANTQHWTTENNGY-SLHDVIRNAKPTVLVGVSGAPGLFSEEIIKEMHQHCPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39
Identity = 94/235 (40.00%), Postives = 135/235 (57.45%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFE 679
            G+EY + +  F+ AV++ + + +L+QFEDF   NA  LLEKY      FNDDIQGTASV +  L++A K    +L  Q+ +F+GAG AG GIAE I +   +   +   E RK+I++VD  GL+    +++L  F+K           W    E   +L+D V     T+LIG SGQ   FT++V+  +     KP++  LSNPTS+ E T EE   W+ G A+ A+GSPF P E
Sbjct:  217 GKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCGIAEHI-IAAMRIEGLSESEARKRIFMVDRFGLLTEG-MDNLLDFQKRLAQKTADVSGWTAGTEAFPQLLDVVTNAGATVLIGVSGQRGLFTEQVIRELHKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVE 448          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39
Identity = 90/230 (39.13%), Postives = 135/230 (58.70%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE---------PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            EY + + + + A+K  + + +L+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +I ++  +  EE R+++++VD  GL+    + +L  F+     + E          V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T +   +W+ G A+ A+GSPF P
Sbjct:  222 EYYQFVDDVIQAIKARWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRGAGSQLSEQKIVFLGAGSAGCGIAEQIIAQIVRE-GVSEEEARQRVFMVDRFGLLTDG-MPNLLPFQNKLVQKREHLQGWDTTNDVLSLLDVVRNVKPNILIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQNILSWTDGEALVATGSPFAP 448          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 91/232 (39.22%), Postives = 135/232 (58.19%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G +Y   + EF+ AV++ + +  LIQFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A +  G  L++QR  FLGAG AG GIAE I  ++  +  +  ++ R ++++VD  GL+    + +L  F++    +H    +         L+D V   KPT+LIG SG    FT+EV++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP
Sbjct:  217 GADYDAFVEEFIQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLMAACQAAGSKLSEQRITFLGAGSAGCGIAEAIIAQMVSE-GISDKKARSQVFMVDRWGLL-QEGMPNLLDFQQRLVQKHSVTAKWETEANGFSLLDVVKNAKPTVLIGVSGAPGLFTQEVIQEMHKHCPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 90/237 (37.97%), Postives = 136/237 (57.38%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS--SRLESLQHFKKP-------WAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD 688
            G +Y E +  F+ A+K+ +   +L+QFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L++Q   F+GAG AG GIAE I   +  +  +   + R++I++VD  GL+    S L   QH           W  +      L++ +   +PT+LIG SGQ   F++EV+  + S  ++P++  LSNPTS+ E T +E   W+ G+A+ A+GSPF P + GD
Sbjct:  218 GAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQGTAAVAVGTLLAACKAKGEKLSEQTVTFVGAGSAGCGIAEQIIAAMQLE-GLDEAQARRRIFMVDRWGLLTDDMSNLLDFQHRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGD 452          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 90/237 (37.97%), Postives = 136/237 (57.38%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS--SRLESLQHFKKP-------WAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD 688
            G +Y E +  F+ A+K+ +   +L+QFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L++Q   F+GAG AG GIAE I   +  +  +   + R++I++VD  GL+    S L   QH           W  +      L++ +   +PT+LIG SGQ   F++EV+  + S  ++P++  LSNPTS+ E T +E   W+ G+A+ A+GSPF P + GD
Sbjct:  218 GAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQGTAAVAVGTLLAACKAKGEKLSEQTVTFVGAGSAGCGIAEQIIAAMQLE-GLDEAQARRRIFMVDRWGLLTDDMSNLLDFQHRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGD 452          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 90/237 (37.97%), Postives = 136/237 (57.38%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS--SRLESLQHFKKP-------WAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD 688
            G +Y E +  F+ A+K+ +   +L+QFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L++Q   F+GAG AG GIAE I   +  +  +   + R++I++VD  GL+    S L   QH           W  +      L++ +   +PT+LIG SGQ   F++EV+  + S  ++P++  LSNPTS+ E T +E   W+ G+A+ A+GSPF P + GD
Sbjct:  218 GAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQGTAAVAVGTLLAACKAKGEKLSEQTVTFVGAGSAGCGIAEQIIAAMQLE-GLDEAQARRRIFMVDRWGLLTDDMSNLLDFQHRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGD 452          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAOM_SOLTU7.483e-3937.86NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MLES_OENOE9.773e-3938.02Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MAO1_VIBCH9.773e-3939.22NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]
MAO1_VIBC39.773e-3939.22NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAO1_PSE149.773e-3940.00NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_KLEP39.773e-3939.13NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_VIBVU1.667e-3839.22NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO1_PSEAE1.667e-3837.97NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB1.667e-3837.97NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA81.667e-3837.97NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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