FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 91/232 (39.22%), Postives = 135/232 (58.19%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G +Y   + EF+ AV++ + +  LIQFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A +  G  L++QR  FLGAG AG GIAE I  ++  +  +  ++ R ++++VD  GL+    + +L  F++    +H    +         L+D V   KPT+LIG SG    FT+EV++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP
Sbjct:  217 GADYDAFVEEFIQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLMAACQAAGSKLSEQRITFLGAGSAGCGIAEAIIAQMVSE-GISDKKARSQVFMVDRWGLL-QEGMPNLLDFQQRLVQKHSVTAKWETEANGFSLLDVVKNAKPTVLIGVSGAPGLFTQEVIQEMHKHCPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.177e-38
Identity = 90/247 (36.44%), Postives = 138/247 (55.87%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE-----------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+ Y + + +++   ++ +    L+ +EDF   NA  +L++Y      FNDDIQGT +V LA ++S  K     L D R +  GAG AG GIAE +   + ++  +  EE+ K+ W +D  GL+    ++ L  F+KP+A   + VK+           L++ V   KPTILIGTS     FT+E+V+ MAS  ++P I  +SNPT+ SE   E+   W++GRA+  +GSPF P EY    +  GQA
Sbjct:  223 GERYDQFIDDYVALARETF-PNALLHWEDFGAKNARSILKRYKDKVCTFNDDIQGTGAVSLAAVLSCAKASKVPLRDHRVVIFGAGTAGIGIAEQLREALVRE-GLSEEESYKRFWCIDRNGLLTDD-MDQLLDFQKPYARSADEVKDYQRNGDGGGIDLLEVVRQAKPTILIGTSTVSGAFTEEIVKEMASHVKRPAILPMSNPTTLSEAKPEDLIEWTEGRALITTGSPFPPVEYNGVTYHIGQA 466          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.850e-38
Identity = 94/234 (40.17%), Postives = 130/234 (55.56%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS---------RLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFE 679
            G+EY + +  F+ AV++ + + +L+QFEDF   NA  LLEKY      FNDDIQGTASV +  L++A K    +L  Q+ +F+GAG AG GIAE I +   +   +   E RK+I++VD  GL+            RL         W    E   +L+D V     T+LIG SGQ   FT++VV  +     KP++  LSNPTS+ E T EE   W+ G A+ A+GSPF P E
Sbjct:  217 GKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCGIAEHI-IAAMRIEGLSESEARKRIFMVDRFGLLTEGMGNLLDFQLRLAQKSADVAGWTAGTETFPQLLDVVTHAGATVLIGVSGQRGLFTEQVVRELYKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVE 448          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 98/234 (41.88%), Postives = 129/234 (55.13%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---------VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFE 679
            G++Y + L +F+ AVK+ Y   +L  FEDF   NA  LLEKY      FNDDIQGT +VV+A LI+A+K     L D R L  GAG AG GIA+ I   +     +  EE RKKI+L+D +GLI    L+S +    P  H +            + L D V  +KPT L+G S Q   FT++VVE M   N +PIIF LSNPT   E    +   W+   A+ A+GSPF P +
Sbjct:  304 GKQYDDFLEKFIKAVKKVYPSAVL-HFEDFGVKNARRLLEKYRYELPSFNDDIQGTGAVVMASLIAALKHTNRDLKDTRVLIYGAGSAGLGIADQIVNHMVTH-GVDKEEARKKIFLMDRRGLI----LQSYEANSTPAQHVYAKSDAEWAGINTRSLHDVVENVKPTCLVGCSTQAGAFTQDVVEEMHKHNPRPIIFPLSNPTRLHEAVPADLMKWTNNNALVATGSPFPPVD 531          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 90/242 (37.19%), Postives = 132/242 (54.55%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G +Y   + +F+   +  +  ++ + +EDF   NA  +L  Y T    FNDDIQGT  VVL G+  ++   G  L DQ +L  G G AG GIA  +  E+  +  +  EE  K  +++D +GL+    +E L   +KP+A +    K+      L++ V  +KPTIL+GTS     FTKEVVEAM +  E+P+IF +SNPT + E TAE+   WS G+A  A+G P     Y    +  GQA
Sbjct:  208 GDQYYSFVDQFVETAESIF-PKLYLHWEDFGRSNAATILNNYKTKIPTFNDDIQGTGIVVLGGIFGSLDITGEKLTDQVYLCYGGGSAGAGIAGRVHAEMVSE-GLSEEEAYKHFFMIDQQGLLFDD-MEDLTPAQKPFAKKRADYKDAGDMTDLLNVVKTVKPTILVGTSTNPGAFTKEVVEAMCANTERPVIFPISNPTKKMETTAEQVIEWSDGKAFVATGVPSGTISYKGVDYQIGQA 446          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37
Identity = 87/237 (36.71%), Postives = 137/237 (57.81%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI---VSSRLESLQHFKKP------WAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD 688
            G +Y E +  F+ A+K+ +   +L+QFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L++Q   F+GAG AG GIAE + +   +   +   + R++I++VD  GL+   +S+ L+  Q   +       W  +      L++ +   +PT+LIG SGQ   F++EV+  +     +P++  LSNPTS+ E T +E   W+ G+A+ A+GSPF P + GD
Sbjct:  218 GAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQGTAAVAVGTLLAACKAKGEKLSEQTVTFVGAGSAGCGIAEQV-IAAMRLEGLDEAQARRRIFMVDRWGLLTDDMSNLLDFQQRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHRHCPQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGD 452          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 86/231 (37.23%), Postives = 132/231 (57.14%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP----------WAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPF 667
            G +Y + + + + A+++ +    LIQFEDF   NA  LL +Y      FNDDIQGTASV +  L++A    G  L+ Q+ LF GAG AG GIAE I  ++  +  + +++ R ++++VD  G++    + +L  F+KP          W  E      L+D +    P +LIG +G    F +E++EAMA   E+P++  LSNPTS+ E   E+   W+QG+AI A+GSPF
Sbjct:  214 GDQYDDFVDDCLKAIRRRW-PNALIQFEDFAQANAMPLLMRYQNQFCCFNDDIQGTASVTVGTLLAAAHATGKKLSAQKVLFAGAGSAGCGIAEAIVAQMVSE-GISVQQARSQVFMVDRWGML-EQEMPNLLPFQKPLAQPASLRTEWQIEANREISLLDVIQHAHPDVLIGVTGVPGLFNQEIIEAMAEDCERPVVMPLSNPTSRVEAKPEDILMWTQGQAIVATGSPF 441          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.907e-34
Identity = 84/243 (34.57%), Postives = 135/243 (55.56%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD---QRFLFLGAGEAGTGIAELIALEISKQTN---MPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK--------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMA-SLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD 688
            G+EY  ++ EFM AV   +   +++QFED  N  A  LL++Y   +  FN D+QGT+ V +AGL+ A++  G  + D   Q+ +  GAG +G G+       +++         +  R + W+VD KGLI   R  +L    +P+A +   +         +LV+ V  +KP +L+G S  G  F+KEV+EA+  S + +P IF++SNPT  +ECT EEA++      ++ASGSPF   + G+
Sbjct:  259 GEEYLAVMDEFMEAVFTRW-PNVIVQFEDIQNKWALTLLQRYRHKYRTFNVDVQGTSGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSSGVGVLNAARKTMARMLGNDESAFDRARSQFWVVDDKGLITEKRA-NLDPEVQPFAWKENEISLQGLNEGAKLVEVVRQVKPDVLLGLSAYGGLFSKEVLEALKDSTSTRPAIFAMSNPTKNAECTPEEAFSIVGDHVVYASGSPFKDVDLGN 499          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 83/242 (34.30%), Postives = 127/242 (52.48%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE-------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQ 709
            G++Y   L   + A+++ + E   I FEDF   NA  +L+ Y      FNDDIQGT +V LA +I A+      L +QR +  GAG AG GIA  I   +     + L++ R  ++++D  GL++    +     +KP+  +    KE       L  A+  +KPTIL+G SGQ   FT++ +  M+   E+PIIF +SNPT+  E   ++   WS G+A+ A+GSP  P       +V  Q
Sbjct:  222 GEQYDSFLDNVIKAIREVFPEAF-IHFEDFGLANAKRILDHYRPDIACFNDDIQGTGAVALAAIIGALHVTKSPLTEQRIMIFGAGTAGVGIANQIVAGMVTD-GLSLDKARGNLFMIDRCGLLLERHAKIATDGQKPFLKKDSDFKEVPSGDINLESAIALVKPTILLGCSGQPGKFTEKAIREMSKHVERPIIFPISNPTTLMEAKPDQIDKWSDGKALIATGSPLPPLNRNGKKYVISQ 461          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32
Identity = 84/240 (35.00%), Postives = 133/240 (55.42%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD---QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK--------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM-ASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD 688
            G+EY  ++ EF+ AV   + + + +QFEDF    AF+ L++Y     +FNDDIQGTA V LAGL+  ++  G  L D   Q+ + +GAG AG G+ ++    +S+ T    +      +L+D  GLI   R + +     P+A  H  ++         L + V  +KP +L+G SG G  F +EV+ AM  S + +P IF++SNPT+ +EC   +A+  +    +FASGSPF   + G+
Sbjct:  245 GEEYLSIVDEFVEAVHARWPKAV-VQFEDFQAKWAFETLDRYRKKFCMFNDDIQGTAGVALAGLLGTVRAQGRPLTDFANQKIVVVGAGSAGLGVLKMALQAVSRMTGPSAD---PHFFLLDKNGLITKDR-KDIDPAALPFAKAHHEIEGLGLQEGAGLAEVVKKVKPHVLLGLSGVGGIFHEEVLRAMKESDSVRPAIFAMSNPTNNAECCPVDAFKLAGEDIVFASGSPFANVDLGN 479          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAO11_VIBVY1.667e-3839.22NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO3_BACSU2.177e-3836.44Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO1_PSESM4.850e-3840.17NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAOM_YEAST1.081e-3741.88NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MLES_LACLA1.411e-3737.19Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MAO1_PSEA71.843e-3736.71NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO12_VIBVY1.195e-3637.23NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MAOM_AMAHP1.907e-3434.57NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAOX_SCHPO2.754e-3334.30NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]
MAON_SOLTU3.977e-3235.00NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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