FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:765..1476. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PHOLL (NAD-dependent malic enzyme OS=Photorhabdus luminescens subsp. laumondii GN=sfcA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.540e-43
Identity = 99/240 (41.25%), Postives = 140/240 (58.33%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G+EY E + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A +  G  L DQ   FLGAG AG GIAE I  ++ K   +  E+ R +I++VD  GL+ + +L +L  F+     +   + +         L+D V   KPT+LIG SGQ   FT+E++  M    E+PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF+P +Y D  +
Sbjct:  220 GKEYDEFVDEFIQAVKRRW-PNVLLQFEDFAQKNAMPLLNRYRHEICCFNDDIQGTAAVTLGSLIAASRAAGRQLKDQTVTFLGAGSAGCGIAEQIVAQM-KSEGLSDEQARARIFMVDRFGLL-TDKLPNLLDFQNKLVQKSSSLAKWDVNNDSISLLDVVRNAKPTVLIGVSGQAGLFTEEIIREMHKHCERPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFNPVKYKDQEY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.542e-43
Identity = 96/240 (40.00%), Postives = 146/240 (60.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G+EY E +  FM AV + + +  LIQFEDF   NA  LLE+Y   +  FNDD+QGTA+V +  L++A K     L++QR  FLGAG AG GIAE I  ++  +  +  E+ R ++++VD  GL+    + +L  F++  A + + ++          L+D VN  KPT+LIG SG    F++E+++AM S   +PI+F LSNPTS+ E T ++   W++G+A+ A+GSPF+P    D  F
Sbjct:  217 GEEYTEFVEAFMQAVHRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCCFNDDVQGTAAVTVGSLLAACKAAKTKLSEQRVTFLGAGSAGCGIAEAIVAQMIAE-GLSEEQARAQVFMVDRWGLL-QDNMPTLLPFQQKLAQKCDDIEGWDNFSENISLLDVVNNAKPTVLIGVSGAPGVFSEEIIKAMHSHCPRPIVFPLSNPTSRVEATPKDLLHWTKGQALVATGSPFEPVVVEDETF 453          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.116e-42
Identity = 100/232 (43.10%), Postives = 141/232 (60.78%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G+EYAE +  FM AV   + +  LIQFEDF   NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGAG AG GIAE I  ++  +  +  E+ R ++ +VD  GL++ + + +L  F++  A +   +           L+D VN  KPT+LIG SG    FT+E+V AM S  E+PIIF LSNPTS+ E T ++   W+ G+A+ A+GSPF+P
Sbjct:  217 GEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGAGSAGCGIAEAIVAQMVSE-GISDEQARSQVCMVDRWGLLLDN-MPNLLPFQQKLAQKCADICNWNNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.457e-42
Identity = 98/240 (40.83%), Postives = 141/240 (58.75%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G+EY   ++EF+ AVK  +   +L+QFEDF   NA  LLE+Y      FNDDIQGTA+V L  LI+A +  GG L +Q+ +FLGAG AG GIAE I  ++ K   +  EE R ++++VD  GL+ + RL +L +F+     + + +           L+D V   KP I+IG SGQ   F++E+V  M     +PII  LSNPTS+ E T ++   W+ G A+ A+GSPF P  + D  +
Sbjct:  220 GEEYDNFVNEFIQAVKSRW-PNVLLQFEDFAQKNAMPLLERYRDEVCCFNDDIQGTAAVTLGTLIAASRAAGGKLCEQKVVFLGAGSAGCGIAEQIIAQM-KSEGLSDEEARARVFMVDRFGLL-TDRLPNLLNFQSRLVQKSDSLSGWDSANDSLSLLDVVRNAKPDIMIGVSGQPGLFSEEIVREMHKHCTRPIIMPLSNPTSRVEATPQDIMAWTDGCALVATGSPFSPVSWKDKTY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.903e-42
Identity = 95/240 (39.58%), Postives = 143/240 (59.58%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G+EY E +  FM AV + + +  LIQFEDF   NA  LLE+Y   +  FNDDIQGTA+V +  L++A K     L +QR  FLGAG AG GIAE I  ++  +  +   + R ++++VD  GL+    + +L +F++  A + + VK+         L+D +N  KPT+LIG SG    F++E+++AM     +PI+F LSNPTS+ E T ++   W+ G+A+ A+GSPF+P       F
Sbjct:  217 GEEYKEFVEAFMQAVNRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKSQLCEQRIAFLGAGSAGCGIAEAIVAQMVSE-GIDEAQARSQVFMVDRWGLL-QDNMPNLLNFQEKLAQKTQAVKDWTIENGNISLLDVMNNAKPTVLIGVSGAPGLFSEEIIKAMHQHCPRPIVFPLSNPTSRVEATPKDVLHWTNGQALVATGSPFEPVALNGETF 453          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.485e-42
Identity = 99/240 (41.25%), Postives = 139/240 (57.92%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY E + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A +  G  L DQ   FLGAG AG GIAE I  ++ K   +  E+ R +I++VD  GL+ + +L +L  F+     + E + +         L++ V   KPTILIG SGQ   FT+E++  M    E+P +  LSNPTS+ E   E+   W+ G+A+ A+GSPF P  Y + V+
Sbjct:  220 GDEYNEFVDEFIQAVKRRW-PNVLLQFEDFAQKNAMPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASRAAGRQLKDQTVAFLGAGSAGCGIAEQIIAQM-KSEGLSDEQARARIFMVDRFGLL-TDKLPNLLDFQSKLIQKSETLADWQTETDAISLLEVVKNAKPTILIGVSGQAGLFTEEIIREMHKHCERPTVMPLSNPTSRVEARPEDIINWTDGQALVATGSPFAPVTYKEKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SHEON (NAD-dependent malic enzyme OS=Shewanella oneidensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.246e-42
Identity = 99/232 (42.67%), Postives = 140/232 (60.34%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G+EYAE +  FM AV   + +  LIQFEDF   NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGAG AG GIAE I  ++  +  +  E+ R ++ +VD  GL++ + + +L  F++  A +   +           L+D VN  KPT+LIG SG    FT+E+V AM S   +PIIF LSNPTS+ E T ++   W+ G+A+ A+GSPF+P
Sbjct:  217 GEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKERYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRVAFLGAGSAGCGIAEAIVAQMVSE-GISDEQARSQVCMVDRWGLLLDN-MPNLLPFQQKLAQKCADISHWNNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIVRAMHSHCPRPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.246e-42
Identity = 98/237 (41.35%), Postives = 139/237 (58.65%), Query Frame = 2
Query:   14 YAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            Y E L  F++AVK+ +   +L+QFEDF   NA  LL++Y      FNDDIQGTASV +  L++A +  G  L++    F+GAG AG GIAE I  ++  +  +  E+ R ++++VD  GL+     E L+ F++     +E + E         LV+ ++  KP ILIG SGQ   FT++V+ AM S  E PIIF LSNP+ Q E T  +   W+QG+ I A+GSPFDP EY    F
Sbjct:  220 YDEFLELFISAVKRRW-PNVLLQFEDFAQPNAMPLLQRYKDRICCFNDDIQGTASVTVGTLLAACRSKGSKLSELNVAFVGAGSAGCGIAEQIISQMMNE-GLGAEQARSQVFMVDRFGLLTQGMGE-LRDFQQKLVQSNEAIAEWDIAGEFASLVEVMHGAKPDILIGVSGQAGLFTEKVITAMKSHCEMPIIFPLSNPSRQVEATPSQVINWTQGQVIIATGSPFDPIEYQGKTF 453          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42
Identity = 98/232 (42.24%), Postives = 141/232 (60.78%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G+EYAE +  FM AV   + +  LIQFEDF   NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGAG AG GIAE I  ++  +  +  E+ R ++ +VD  GL++ + + +L  F++  A +   ++          L+D VN  KPT+LIG SG    FT+E++ AM S   +PIIF LSNPTS+ E T ++   W+ G+A+ A+GSPF+P
Sbjct:  217 GEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSE-GISDEQARTQVCMVDRWGLLLDN-MPNLLPFQQKLAQKCTNIQNWSNFSDNISLLDVVNNAKPTVLIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42
Identity = 98/232 (42.24%), Postives = 141/232 (60.78%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G+EYAE +  FM AV   + +  LIQFEDF   NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGAG AG GIAE I  ++  +  +  E+ R ++ +VD  GL++ + + +L  F++  A +   ++          L+D VN  KPT+LIG SG    FT+E++ AM S   +PIIF LSNPTS+ E T ++   W+ G+A+ A+GSPF+P
Sbjct:  217 GEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSE-GISDEQARTQVCMVDRWGLLLDN-MPNLLPFQQKLAQKCTNIQNWSNFSDNISLLDVVNNTKPTVLIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEP 445          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAO1_PHOLL6.540e-4341.25NAD-dependent malic enzyme OS=Photorhabdus lumines... [more]
MAO1_SHESH8.542e-4340.00NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_SHESA1.116e-4243.10NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_ERWT91.457e-4240.83NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAO1_SHEWM1.903e-4239.58NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO1_PROMH2.485e-4241.25NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MAO1_SHEON3.246e-4242.67NAD-dependent malic enzyme OS=Shewanella oneidensi... [more]
MAO1_COLP33.246e-4241.35NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAO1_SHEB94.239e-4242.24NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB84.239e-4242.24NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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