FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:765..1476. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.748e-41
Identity = 95/238 (39.92%), Postives = 140/238 (58.82%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS---------RLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY + + +F+ AVK  + + +L+QFEDF   NA  LL +Y      FNDDIQGTA+V    LI+A +  G  L+ Q+ +FLGAG AG GIAE I  +  ++  +  E  R ++++VD  GL+  +         +L   +   K W  ++E V  L+D V  +KP ILIG SGQ   FT+E++  M    E+PI+  LSNPTS+ E T ++   W++G A+ A+GSPFDP  + D V+
Sbjct:  222 EYYQFVDDFIQAVKHRWPD-VLLQFEDFAQKNAMPLLNRYRDEICSFNDDIQGTAAVTAGTLIAASRAAGSQLSYQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEELARSRVFMVDRFGLLTDAMPNLLPFQTKLVQKRENLKNWDTDNE-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCERPIVMPLSNPTSRVEATPQDIIVWTEGNALVATGSPFDPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41
Identity = 96/240 (40.00%), Postives = 137/240 (57.08%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            G EY E + + +T +++ +    LIQFEDF   NA  LL KY      FNDDIQGTA+V +  LI+A +  G  L DQ   FLGAG AG GIAE I  ++  +  +   + R ++++VD  GLI  ++  +L  F++  A + E V +         L+D V   KPT+LIG SGQ   FT+EV+  +A   E+PI+  LSNPTS+ E    +   W+ GRA+ A+GSPF P  Y   ++
Sbjct:  221 GDEYYEFIDQVLTGIRRRW-PHALIQFEDFAQKNAMPLLTKYRDKFCCFNDDIQGTAAVSVGSLIAASRAAGKQLKDQTITFLGAGSAGCGIAEQIVAQMVAE-GLTDAQARARVYMVDRFGLITENQ-PNLLDFQRKLAQKAEVVSDWGNVEEVISLLDVVKNAKPTVLIGVSGQPGLFTEEVIRTLAENCERPIVMPLSNPTSRVEALPSDVIQWTNGRALIATGSPFAPVNYQGKLY 457          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALCH (NAD-dependent malic enzyme OS=Salmonella choleraesuis GN=sfcA PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIVWTEGNALVATGSPFSPVIWKDKVY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 96/242 (39.67%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVY 456          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAO1_ENT382.748e-4139.92NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]
MAO1_ACIAD3.589e-4140.00NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_SALTY4.687e-4139.67NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI4.687e-4139.67NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV4.687e-4139.67NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB4.687e-4139.67NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA4.687e-4139.67NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALHS4.687e-4139.67NAD-dependent malic enzyme OS=Salmonella heidelber... [more]
MAO1_SALCH4.687e-4139.67NAD-dependent malic enzyme OS=Salmonella choleraes... [more]
MAO1_SALA44.687e-4139.67NAD-dependent malic enzyme OS=Salmonella agona (st... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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