FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 97/238 (40.76%), Postives = 137/238 (57.56%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVK+ +   +L+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L DQ   FLGAG AG GIAE I  ++ K   +  EE R ++++VD  GL+ + +L +L  F+     + E + +         L++ V   KPTI+IG SGQ   FT+E++  M     +PI+  LSNPTS+ E   E+   W++G A+ A+GSPF P  Y D VF
Sbjct:  222 EYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDEICSFNDDIQGTAAVAIGSLIAASRAAGTQLRDQTVAFLGAGSAGCGIAEQIIAQM-KSEGLSEEEARARVFMVDRFGLL-TDKLPNLLDFQSKLVQKSELLADWDCNSDAISLLEVVRNAKPTIMIGVSGQPGLFTEEIIREMYKHCARPIVMPLSNPTSRVEARPEDIIRWTEGSALVATGSPFSPVHYQDKVF 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SERP5 (NAD-dependent malic enzyme OS=Serratia proteamaculans (strain 568) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 97/235 (41.28%), Postives = 135/235 (57.45%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY 682
            G EY   + EF+ AVK+ +   +L+QFEDF  +NA  LL +Y      FNDDIQGTA+V L  LI+A +  G  L DQ   FLGAG AG GIAE I  ++ K   +  +E R ++++VD  GL+ + +L +L  F+     + E +           L+D V   KPTILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E   E+   W++G A+ A+GSPF P  Y
Sbjct:  220 GDEYHAFVEEFIQAVKRRW-PNVLLQFEDFAQNNATPLLNRYRDEICCFNDDIQGTAAVTLGSLIAASRAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQM-KSEGLSEDEARARVFMVDRFGLL-TDKLPNLLDFQSKLVQKSENLTAWQTQSDAISLLDVVRNAKPTILIGVSGQPGLFTEELIREMHKHCPRPIVMPLSNPTSRVEARPEDIINWTEGAALVATGSPFAPVHY 451          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 95/242 (39.26%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D ++
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 95/242 (39.26%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D ++
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALEP (NAD-dependent malic enzyme OS=Salmonella enteritidis PT4 (strain P125109) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 95/242 (39.26%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D ++
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 95/242 (39.26%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            EY   + EF+ AVKQ + + IL+QFEDF   NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGAG AG GIAE I  +  ++  +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D ++
Sbjct:  222 EYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQRE-GLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIY 456          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 95/232 (40.95%), Postives = 137/232 (59.05%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDP 673
            G +Y   + EF+ AV++ + +  LIQFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L+ QR  FLGAG AG GIAE I  ++  +  +  E+ R ++++VD  GL+    + +L  F++    +H   KE         L+D +   KPT+LIG SG    F++EV+E M    ++PI+F LSNPTS+ E T  +   W+ G A+ A+GSPFDP
Sbjct:  217 GPDYDAFVEEFIQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKDRICCFNDDIQGTAAVTVGSLLAACKAAGTQLSKQRITFLGAGSAGCGIAEAIIAQMVSE-GISDEKARSQVYMVDRWGLL-QEGMPNLLDFQQRLVQKHSNTKEWENEGNGFSLLDVMRNAKPTVLIGVSGAPGLFSQEVIEEMHKHCKRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFDP 445          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.326e-40
Identity = 97/229 (42.36%), Postives = 134/229 (58.52%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE--------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPF 667
            G EY E +  F+ AVK+ + E +L+QFEDF   NA  LL KY      FNDDIQGTA+V +  LI+A       L+ Q   FLGAG AG GIAE I  ++ ++  +  E+ R+++++VD  GL+  S  E LQ F+ P   +   ++         L   V   + T+L G SGQ   FT+EVVEA+ +  E PI+  LSNPTS+ E T +E   WS+G+AI A+GSPF
Sbjct:  216 GDEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQENATPLLNKYRDQLCCFNDDIQGTAAVSVGTLIAACLNKSQKLSQQNIAFLGAGSAGCGIAEHIIRQMQRE-GLTEEQARRQVFMVDRYGLLTDSMTE-LQKFQTPLVQKESDIEHWDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALCANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPF 441          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.326e-40
Identity = 100/235 (42.55%), Postives = 131/235 (55.74%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV---------SSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY 682
            G EY   + EF+ AVK+ + + +L+QFEDF   NA  LL +Y      FNDDIQGTA+V L  LI+A    G  L DQ   FLGAG AG GIAE I  ++  +  +  EE R +I++VD  GL+           SRL   +     W  E E +  L+D V    PT+LIG SGQ   F++ +V  M S   +PII  LSNPTS+ E   E+   W+ G A+ ASGSPF+P  Y
Sbjct:  220 GDEYNAFVEEFIQAVKRRWPD-VLLQFEDFAQKNAMPLLSRYRDRLCCFNDDIQGTAAVTLGSLIAASHAAGSRLRDQTITFLGAGSAGCGIAEQIIAQMIAE-GLSDEEARTRIFMVDRFGLLTDRLPNLLDFQSRLVQKRQALAGWQTESEGI-SLLDVVRNAHPTVLIGVSGQPGLFSEAIVREMHSHCPRPIIMPLSNPTSRVEARPEDIINWTDGAALVASGSPFEPVLY 451          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.326e-40
Identity = 92/240 (38.33%), Postives = 141/240 (58.75%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 697
            GQEY   + EF+ AVK+ + +  LIQFEDF   NA  LLE+Y      FNDDIQGTA+V +  L++A K     L++QR  FLGAG AG GIAE I  ++  +  +   + R ++++VD  GL++   + +L +F++    + + V E         L+D +   KPT+LIG SG    F+++V+  M +  ++PI+F LSNPTS+ E T  +   W+ G A+ A+GSPF+P  +    +
Sbjct:  217 GQEYDNFVDEFIQAVKRRWPDA-LIQFEDFAQKNAMPLLERYKNKICCFNDDIQGTAAVTVGSLLAACKAAKSKLSEQRISFLGAGSAGCGIAEAIIAQMVSE-GISEAQARSQVFMVDRWGLLIDD-MPNLLNFQQALVQKRDTVNEWDLADNNVSLLDVMRNAKPTVLIGVSGVPGLFSEDVIREMHAHCKRPIVFPLSNPTSRVEATPADIINWTDGNALVATGSPFEPVVHNGKTY 453          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAO1_ERWCT4.687e-4140.76NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAO1_SERP56.121e-4141.28NAD-dependent malic enzyme OS=Serratia proteamacul... [more]
MAO1_SALNS6.121e-4139.26NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALG26.121e-4139.26NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_SALEP6.121e-4139.26NAD-dependent malic enzyme OS=Salmonella enteritid... [more]
MAO1_SALDC6.121e-4139.26NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_VIBPA7.995e-4140.95NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_PSYCK2.326e-4042.36NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_EDWI92.326e-4042.55NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]
MAO11_PHOPR2.326e-4038.33NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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