FC929857

Overview
NameFC929857
Unique NameFC929857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 2
Query:   50 LFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQD 487
            L +   L  VF  V    + S  RG++ +LPPGP P P+ GN L++G    H++L   AK  G +  LR+GQ   VVVSSP + K +L      F  R R V   + +   +     +V+      W+ +R++  +  FT++ +  N++
Sbjct:    4 LLLEKSLIAVFVAVILATVISKLRGKKLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNRE 148          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12
Identity = 44/102 (43.14%), Postives = 58/102 (56.86%), Query Frame = 2
Query:   44 MDLFI--SCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDR 340
            MDL +    +L L      A+ +S + RG+R +LPPGP P PV GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L      F  R
Sbjct:    1 MDLLLLEKTLLALFIAATIAITISKL-RGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR 101          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12
Identity = 50/189 (26.46%), Postives = 92/189 (48.68%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRKQL--PPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDV 625
            + W+VF          I + RR     PP P   P+IG+L +L   PH+SL +LAK++G + SL +G   TVV++  S  K +  +   +F +R  P+++  + N    F  +       W+  RKL +  + T  K+    +L  K+ ++L+  ++E     +     +     SLN++ + +FS ++
Sbjct:   12 LFWIVFDF--------IRKNRRISFNDPPSPWALPIIGHLHKLSLNPHRSLTELAKVYGGVYSLHIGDSKTVVITDVSAFKDVTIKQFKNFANRPQPKSIRVITN----FKGLAFADYDQWQKTRKLVSSAL-TKTKIKTFNNLIEKQTENLIESMNEFSNKNELFHPRKYLTKYSLNIILSMLFSKEI 187          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 2
Query:   50 LFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            L    +L L    + A+ +S + RG++ +LPPGP P PV GN L++G     ++L   AK  G +  LR+GQ   VVVSSP +AK +L      F  R R V   + +   +     +V+   S  W+ +R++  +  FT++
Sbjct:    6 LLEKALLGLFIATIVAITISKL-RGKKLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYSEHWRKMRRIMTVPFFTNK 142          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 55/232 (23.71%), Postives = 109/232 (46.98%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRR-KQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDEN-----CRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSE----REFKDTVWGIMEEAGKPNLSEHFPLLK 721
            +S + + VF L      + + R R+ K LPPGP   P+IGNL  L    H++   L++ +G + SL  G    VVVSS S  +    ++D    +R  P  +      +   +L        W+NLR++  + + ++ ++++   +RR + + L+  + ++       M  +       FN  + ++S   +  +  D S+     +F+D V  +++ +G  N ++  PLL+
Sbjct:    4 LSLLSYSVFYLALFFIFNIVIRARKFKNLPPGPPSLPIIGNLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANR--PRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLR 233          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11
Identity = 42/171 (24.56%), Postives = 93/171 (54.39%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRK--QLPPGPRPYPVIGNLLELGG-KPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQ 568
            +L ++  LV A A   +    +K  +LPPGP+  P+IGNL ++    P   L +L+K++GPI ++++G     V+SS  +AK +LK  D +F  R + +   ++  +  E  L +   +  ++ +RK+C +++F+  ++ + + +R ++ + ++  + +       +D  +
Sbjct:    3 LLLIIAGLVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRE--LGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSE 171          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11
Identity = 49/161 (30.43%), Postives = 85/161 (52.80%), Query Frame = 2
Query:   50 LFISCILWLVFTLVCAMALSSISRGRRKQ-----LPPGPR-PYPVIGNLLELGGKPHKSLAKLAKIHGP--IMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIK 508
            L +  +++LV  LV A    + S  +RKQ     LPP P    P+IG+L  +G + H S+  L   HG   ++ LR+G V T+ VSSPS A A+L+  D  F  R  P  + +   R+    + ++P     +  RKL   H+ +++K+ + +  R+++++
Sbjct:   24 LLLGVLIFLVIRLVSARRTGTTSANKRKQQQRLPLPPWPPGKLPIIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASR--PPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVR 182          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11
Identity = 51/175 (29.14%), Postives = 90/175 (51.43%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQ--LPPGPR-PYPVIGNLLELGGKPHKSLAKL-AKI-HGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDE--NCRMGKAID 559
            +  +L L   L  A   SS +  + KQ  LPP P    P+IG+L  +G  PH S   L AK  H  +M +++G V T+VVS+P  A+A+L+ HD     R  P   ++   R+    + + P    W+  RK+ N H+ +++ + + +  R ++++ ++A + +      G A+D
Sbjct:   26 LGVLLLLAIRLAAAARSSSATSPKWKQHRLPPTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASR--PRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALD 198          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11
Identity = 42/152 (27.63%), Postives = 78/152 (51.32%), Query Frame = 2
Query:   83 TLVCAMALSSISRG---RRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVD 529
            TL+  + L SI +        LPP P   PVIGNL +L    H+SL  L+  +GP+M L  G+   ++VSS  +A  ILK +D    +R   + +  +     +  + + P    WK ++ +C  ++ +++ + + + +R  +IK ++  V+
Sbjct:   12 TLLALLLLKSILKRTTTNNLNLPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRD--VAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVE 161          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11
Identity = 60/234 (25.64%), Postives = 107/234 (45.73%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISR--GRRKQLPPGPRPYPVIGNL-LELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAID----------FGQAAFNTSLNLLSNTIF-SIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            ++ L+F L+C      + +  G  K+ P     +P+ G+L L +G K PHK+L  LA+ HGP+ +++LG    +VVS   MA+     +D +   R  P+ +++    +    L+  P  P W+ LRK+    I +S +++  QD+R  ++++ +  + +  R  K             F Q  FN  L ++    F S    D    +    V   M  AG   + +  P L+
Sbjct:   15 VVSLIF-LLCLFLYGPLKKVHGSSKEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSAR--PKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMRLAGVFTVGDAIPYLR 245          
The following BLAST results are available for this feature:
BLAST of FC929857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
TCMO_ARATH4.683e-1230.87Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_CICAR7.988e-1243.14Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C519B_DICDI7.988e-1226.46Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
TCMO_PETCR1.363e-1132.39Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C81E1_GLYEC1.363e-1123.71Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C83B1_ARATH1.780e-1124.56Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE1.780e-1130.43Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71C1_MAIZE1.780e-1129.14Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71AJ_ARATH2.324e-1127.63Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C82A4_SOYBN3.035e-1125.64Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34001B09EF PostHarvC1 Citrus clementina cDNA clone C34001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929857 ID=FC929857; Name=FC929857; organism=Citrus clementina; type=EST; length=721bp
GATTGAGGGTTCGAAATAAAGAGAACTTAAAGTAAGCTCAAAGATGGATT
TGTTCATTAGCTGTATACTATGGCTTGTATTCACATTGGTTTGCGCGATG
GCTTTAAGTTCCATTTCTAGAGGAAGACGCAAACAGCTTCCACCGGGACC
GAGGCCATATCCGGTGATCGGAAACCTCCTGGAGCTGGGTGGTAAACCTC
ACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGCCCCATAATGAGTCTA
AGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATGGCTAA
AGCTATACTTAAAGAACATGATTCATCATTCAGAGATCGAAAGGTCCCTG
AAGCAGTCTTGTCCCTGCCTAACCGGCACCCTGAATTCAGCTTGGTCTGG
CTGCCAGTCTCACCACTATGGAAAAATCTTCGAAAACTATGCAACATGCA
TATTTTCACTAGTCAGAAACTCGATGCCAATCAAGACCTCCGACGCAAGA
AAATCAAAGACCTTCTTGCTTATGTTGATGAAAATTGCCGTATGGGCAAA
GCAATAGATTTTGGCCAAGCTGCTTTTAATACTTCACTTAATTTGTTATC
CAACACGATTTTTTCTATTGATGTCGTTGATCCCAGTGAGCGAGAGTTTA
AGGATACAGTTTGGGGTATCATGGAAGAAGCAGGAAAGCCTAACTTGTCC
GAACATTTTCCTCTACTAAAA
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