FC929857

Overview
NameFC929857
Unique NameFC929857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14
Identity = 50/164 (30.49%), Postives = 80/164 (48.78%), Query Frame = 2
Query:   44 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRR-------KKIKDL 514
            M +  S +L L    +  +  +   +  ++ LPPGP   P++GNL +L G  H+ L +L+K HGP+M L+LG V  V++SS   A+  LK HD     R    A       +    L     S  W+ LRK+     F+ +K+ + + +R        KK++DL
Sbjct:    1 MAILQSFLLLLSLPFLFTLIYTKKMKESKRNLPPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLG--AYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDL 162          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 51/146 (34.93%), Postives = 80/146 (54.79%), Query Frame = 2
Query:   44 MDLFI--SCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            MDL +    ++ L    V A+A+S++ RGR+ +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L      F  R R V   + +   +     +V+      W+ +R++  +  FT++
Sbjct:    1 MDLLLLEKTLIGLFLAAVVAIAVSTL-RGRKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.456e-13
Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   44 MDLFI--SCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            MDL +    +L L    V A+ +S + RG+R +LPPGP P P+ GN L++G    H++L +LAK  G I  LR+GQ   VVVSSP +AK +L      F  R R V   + +   +     +V+      W+ +R++  +  FT++
Sbjct:    1 MDLLLLEKTLLGLFLAAVVAIVVSKL-RGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQ----DMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 57/217 (26.27%), Postives = 105/217 (48.39%), Query Frame = 2
Query:  116 SRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPL---WKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCR-MGKAIDF---------GQAAFNTSLNLLSNTIFSIDVVDPSERE--FKDTVWGIMEEAGKPNLSEHFPLLK 721
            S+ +R  LPPGP   P +G+L  +    H+ L + +  +GPI SLR G    VV++SPS+A    +E  +   D  +    L L  ++  ++   +  +P    W+NLR++C+  I +S +L   Q +R+ +I  +L  +    +   ++ DF             FN  + +++   +  D V+  E    FK  V+ I   +G  + +++ P+LK
Sbjct:   21 SKTQRFNLPPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLA----QESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGDDVNNKEEAELFKKLVYDIAMYSGANHSADYLPILK 233          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 52/146 (35.62%), Postives = 80/146 (54.79%), Query Frame = 2
Query:   44 MDLFI--SCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPH-KSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            MDL +    +L L    V A+A+S + RG+R +LPPGP  +PV GN L++G   + + LA L+K  G +  LR+GQ   VVVSSP MAK +L      F  R R V   + +   +     +V+   S  W+ +R++  +  FT++
Sbjct:    1 MDLLLLEKALLGLFAAAVVAIAVSKL-RGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYSEHWRKMRRIMTVPFFTNK 141          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 2
Query:   50 LFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            L I   L  +F  +    L S  RG++ +LPPGP P P+ GN L++G    H++L  LAK  G I+ LR+GQ   VVVSSP +AK +L      F  R R V   + +   +     +V+      W+ +R++  +  FT++
Sbjct:    4 LLIEKTLVALFAAIIGAILISKLRGKKFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = 2
Query:   77 VFTLVCAMALSSISRGRRKQ-LPPGPR-PYPVIGNLLELGGKPHKSLAKL-AKI-HGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKI 505
            V  L+ ++A S+ S GR K  LPP P    P++G+L  +G + H SL +L AK  H   + LR G V T++VSSPS A+A+++ HD     R  P ++ S   R+    + + P+   W+  RKL N H+ +++K+ + +  R +++
Sbjct:   35 VLLLLASLAKSTSSSGRGKPPLPPSPPGTLPIVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASR--PWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEV 179          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 47/160 (29.38%), Postives = 79/160 (49.38%), Query Frame = 2
Query:  134 QLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIF 613
            +LPPGP   P+IGNL +LG   H S  KL+  HGP+M LR G V  VV+SS   AK +LK  D     R  P+ V +         + +      W+ ++KL  + +F  +K    + +R ++   L+  + ++ +    +D  +A F+ +  ++    F
Sbjct:   29 KLPPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSR--PKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTLVDLRKAFFSFTAGIIFRVSF 186          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 61/222 (27.48%), Postives = 111/222 (50.00%), Query Frame = 2
Query:   68 LWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSE-REFKDTVWGIMEE---AGKPNLSEHFPLLK 721
            ++L+ +L+  +A  +  + R   +PPGP P P+IGNL +LG  P+KSL   +  +G + ++ LG V TV++S P++ + I+ +++ S  DR + ++ L +     E +L++   S  W   RK+ +  +  ++K +    + ++ I  L  Y        +AI+        SLN + +  FS  V   S+          IMEE    G P+  ++ P LK
Sbjct:    1 MYLILSLIIFLAYVAFHKKRTNGMPPGPFPLPIIGNLHQLGKSPYKSLKSFSDKYGGLTTIFLGSVPTVLISEPNILREIIIKNNDSIIDRYISDSGLIIGG---ERNLLFSKGS-FWIKYRKIFSSAMTNARKFNIASRIEQQAI-SLNNYFGTYANSKQAINPHDYIRRYSLNGVIDYSFSDSVEYESDTHHIVIRAAEIMEEILATGNPH--DYLPFLK 215          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 50/196 (25.51%), Postives = 104/196 (53.06%), Query Frame = 2
Query:   59 SCILWLVFTLVCAMALSSISRGRRK-QLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSE 640
            S ++ LV T   ++ ++   + + + + PPGP   P+IG+L  L GK P  +LA +AK +GP+  ++LG+V +VV+SS    K  +K  D +  +R   E++ +    +    +++ P S  W+ +RK+C   + +S+ + +   +R+ ++  LL ++  +   G A+D  +     + +++    F   + D +E
Sbjct:    8 SALIILVVTYTISLLINQWRKPKPQGKFPPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRF--ESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSA--GAAVDMTERIETLTCSIICRAAFGSVIRDNAE 199          
The following BLAST results are available for this feature:
BLAST of FC929857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71BP_ARATH8.534e-1430.49Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN1.115e-1334.93Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU1.456e-1334.93Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C81F1_ARATH3.243e-1326.27Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_RUTGR5.532e-1335.62Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_HELTU5.532e-1333.80Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C71C3_MAIZE5.532e-1334.01Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71B8_ARATH5.532e-1329.38Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C516B_DICDI7.225e-1327.48Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]
C71DF_MENPI9.436e-1325.51Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionC34001B09EF PostHarvC1 Citrus clementina cDNA clone C34001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929857 ID=FC929857; Name=FC929857; organism=Citrus clementina; type=EST; length=721bp
GATTGAGGGTTCGAAATAAAGAGAACTTAAAGTAAGCTCAAAGATGGATT
TGTTCATTAGCTGTATACTATGGCTTGTATTCACATTGGTTTGCGCGATG
GCTTTAAGTTCCATTTCTAGAGGAAGACGCAAACAGCTTCCACCGGGACC
GAGGCCATATCCGGTGATCGGAAACCTCCTGGAGCTGGGTGGTAAACCTC
ACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGCCCCATAATGAGTCTA
AGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATGGCTAA
AGCTATACTTAAAGAACATGATTCATCATTCAGAGATCGAAAGGTCCCTG
AAGCAGTCTTGTCCCTGCCTAACCGGCACCCTGAATTCAGCTTGGTCTGG
CTGCCAGTCTCACCACTATGGAAAAATCTTCGAAAACTATGCAACATGCA
TATTTTCACTAGTCAGAAACTCGATGCCAATCAAGACCTCCGACGCAAGA
AAATCAAAGACCTTCTTGCTTATGTTGATGAAAATTGCCGTATGGGCAAA
GCAATAGATTTTGGCCAAGCTGCTTTTAATACTTCACTTAATTTGTTATC
CAACACGATTTTTTCTATTGATGTCGTTGATCCCAGTGAGCGAGAGTTTA
AGGATACAGTTTGGGGTATCATGGAAGAAGCAGGAAAGCCTAACTTGTCC
GAACATTTTCCTCTACTAAAA
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