FC929857

Overview
NameFC929857
Unique NameFC929857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20
Identity = 61/222 (27.48%), Postives = 114/222 (51.35%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDV---VDPSEREFKDTVWGIMEEAGKPNLSEHFP 712
            +S + +++F L+ A    +  + RR   PPG   +P+IGNL +LG   H+SL KL+K +GP+M L+LG+V T+++SS   AK  L+++D     R  P         +    +   P +  WK LRKLC+  +F++ K+ + Q ++ +++K ++  + E+  +   ++  +     + +++    F +     V  S+R F   V    E  G  + S+  P
Sbjct:    7 LSLLFFIIFLLLAAFKRKNHGKHRRIPSPPG---FPIIGNLHQLGELQHQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSR--PSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAESSSLKNPVNLSKTFLALTTSVVCKAAFGVSFEGSVLNSDR-FNKLVRDTFEMLGSFSASDFIP 222          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 54/171 (31.58%), Postives = 94/171 (54.97%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDR-KVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDF 562
            +S  L++ F  +       ++  + K+LPPGP   P IG +  L GG PH+ L  LA+ +GP+M L+LG+V+ VVV+SP MAK +LK HD +F  R K+    +   NR     + + P    W+ +RK+C M + +++ + +   +R  ++  L+  +      G+ ++F
Sbjct:    4 VSIFLFISFLFLLRKWKKYLNNSQTKKLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRR---DIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNF 171          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 50/185 (27.03%), Postives = 100/185 (54.05%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSI 619
            +L L+F +   +A+ +  +  + +  P P  +P+IGNL ++G  PH++L KL+K +GP+M L LG+V TVVVSS   A+ +L+ HD     R        L   +    + + P    WK +RKLC   +F+++++ + Q ++ +++K ++  + E+      ++        +++++  T F +
Sbjct:    6 LLPLIFLVCILLAVFNHKKHPKYRQFPCPPGFPIIGNLHQIGELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNY--LDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRTAFGV 188          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 61/227 (26.87%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   44 MDLFISCILWLVFTLVCAMALSSISRGRRK-QLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFS-IDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLL 718
            M++ +S  L L   +   +    + R   K  LPP P   PVIGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A+ +LK HD  F +R   +AV  L N   +  +V+ P    W+ ++ +C +++ T++ +++ + +R  ++  ++  +++      + +  +       ++ S          D + R+ K  V  IME  G+  + E+ P+L
Sbjct:    1 MEMILSISLCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRD--VVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRKHSEDETARDLKKRVRQIMELLGEFPIGEYVPIL 225          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.746e-19
Identity = 64/208 (30.77%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  137 LPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLL--------------AYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLL 718
            LPPGP  +P+IG L  LG  PH SLA +A  +GPIM L+LG   TVV S+P  A+A LK HD++F +R +      L     +  +V+    P WK LRKLC++H+   + L+    ++  ++  +L                V E      A   G+   +    ++++ + S      S  EF+  V  +M  AG  N+ +  P +
Sbjct:   38 LPPGPTGWPIIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQD--MVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSVPVPVVVPEMLTYAMANMIGRIILSRRPFVITSKLDSSASASASVSEFQYMVMELMRMAGLFNIGDFIPYI 243          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.746e-19
Identity = 48/154 (31.17%), Postives = 89/154 (57.79%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYV 526
            +LW +  +        +S G++ + PP P   P+IGNL +LG   H+SL  L++ +GP+M L LG+V  ++VSS  MA+ ILK HD +F +R  P + LS    +    +   P    W+ ++ +C +H+ +++ + + +D+R ++I  ++A +
Sbjct:    7 LLWSIIFMTILFLKKQLS-GKKGKTPPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANR--PRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKI 157          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 62/222 (27.93%), Postives = 111/222 (50.00%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELG---GKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            I + VF L+  +  +   +   K LPPGP   P+IGNL +L      P ++L KL + +GP+M L+LG+++T+VVSSP MA  ++K HD  F  R  P+ +      +    + + P    W+ +RK+C + + +++++ +   +R+ + K L+  +  +   G  ID     F+     +S   F  +  +  + EF   V   +   G   + + FP LK
Sbjct:   10 ITFFVFLLLHWLVKTYKQKSSHK-LPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQR--PQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSA--GSPIDLSGKLFSLLGTTVSRAAFGKE--NDDQDEFMSLVRKAITMTGGFEVDDMFPSLK 224          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 60/198 (30.30%), Postives = 100/198 (50.51%), Query Frame = 2
Query:   98 MALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYV--------DENCRMGKAIDFGQAAFNTSLNLLSNTIF--SIDVVDPSEREFKDTV 661
            ++L+ ++R R  +LPPGPRP+PV+GNL ++     +   + A+ +GP++S+  G   TVVVS+  +AK +LKE+D    DR    +         +  L+W    P +  +RKLCN+ +FT ++L+A + +R  ++  ++  V        +E   M         AFN    L     F  +   +D   REFK  V
Sbjct:   18 LSLALLNRLRLGRLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQD--LIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIV 213          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 68/222 (30.63%), Postives = 107/222 (48.20%), Query Frame = 2
Query:   74 LVFTLVCAMALSSI--SRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLS----NTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            LV  +V ++  + I   + R+K+LPP P+  P+IG+L  +   PH+   KL+  HGPIM L LG V  VV S+   AK  LK H+ +F +R      +         + V+ P  P  K ++KLC   +   + LD    +R+++ K  +  V +    G+A+DFG      S N++S    N   S D  +    E +  V  + E  G  N+S+    LK
Sbjct:    6 LVICVVSSIVFAYIVWRKERKKKLPPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVQF------LTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMNQTSSED--EKQAEEMRMLVADVAELMGTFNVSDFIWFLK 219          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 49/163 (30.06%), Postives = 94/163 (57.67%), Query Frame = 2
Query:   71 WLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAID 559
            WL+  L+  + +  + R   K LPPGP   P++GN+ +LG  PH+SL  L+  +GP++++ LG V TVVV SP  A+ +LK HDS    R  P+  ++    +    L +      ++++RKLC + +F+ ++ ++ +++R +++  L+    ++   G ++D
Sbjct:   15 WLLLLLIPPLLIFFLLRSP-KNLPPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTR--PKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVD 174          
The following BLAST results are available for this feature:
BLAST of FC929857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71BQ_ARATH6.102e-2027.48Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71D7_SOLCH1.041e-1931.58Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BW_ARATH5.166e-1927.03Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH5.166e-1926.87Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME6.746e-1930.77Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71AP_ARATH6.746e-1931.17Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN1.503e-1827.93Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C98A1_SORBI2.564e-1830.30Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C93A2_SOYBN3.348e-1830.63Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71B6_ARATH3.348e-1830.06Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34001B09EF PostHarvC1 Citrus clementina cDNA clone C34001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929857 ID=FC929857; Name=FC929857; organism=Citrus clementina; type=EST; length=721bp
GATTGAGGGTTCGAAATAAAGAGAACTTAAAGTAAGCTCAAAGATGGATT
TGTTCATTAGCTGTATACTATGGCTTGTATTCACATTGGTTTGCGCGATG
GCTTTAAGTTCCATTTCTAGAGGAAGACGCAAACAGCTTCCACCGGGACC
GAGGCCATATCCGGTGATCGGAAACCTCCTGGAGCTGGGTGGTAAACCTC
ACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGCCCCATAATGAGTCTA
AGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATGGCTAA
AGCTATACTTAAAGAACATGATTCATCATTCAGAGATCGAAAGGTCCCTG
AAGCAGTCTTGTCCCTGCCTAACCGGCACCCTGAATTCAGCTTGGTCTGG
CTGCCAGTCTCACCACTATGGAAAAATCTTCGAAAACTATGCAACATGCA
TATTTTCACTAGTCAGAAACTCGATGCCAATCAAGACCTCCGACGCAAGA
AAATCAAAGACCTTCTTGCTTATGTTGATGAAAATTGCCGTATGGGCAAA
GCAATAGATTTTGGCCAAGCTGCTTTTAATACTTCACTTAATTTGTTATC
CAACACGATTTTTTCTATTGATGTCGTTGATCCCAGTGAGCGAGAGTTTA
AGGATACAGTTTGGGGTATCATGGAAGAAGCAGGAAAGCCTAACTTGTCC
GAACATTTTCCTCTACTAAAA
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