FC929857

Overview
NameFC929857
Unique NameFC929857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21
Identity = 67/232 (28.88%), Postives = 114/232 (49.14%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRM----GKAID----FGQAAFNTSLNLLSNTIF--SIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            +S  L  V T+   ++   I R R K  PPGP P P++GNL ++     +   + A+ +GPI+S+ +G +  VVVSS  +AK +LKEHD    DR    +  +      +  L+W    P +  +RK+C + +FT ++L++ + +R  ++  ++  V  +C +     K +      G  AFN    L     F  +  VVD    EFK  V   ++     +++EH P L+
Sbjct:    1 MSWFLIAVATIAAVVSYKLIQRLRYK-FPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQD--LIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASLSIAEHIPWLR 229          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21
Identity = 60/194 (30.93%), Postives = 111/194 (57.22%), Query Frame = 2
Query:  170 GNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQ-VTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRM----GKAIDFGQAAFNTSLNLLSNTIFSIDVV-DPSER---EFKDTVWGIMEEAGKPNLSEHFPLLK 721
            GN+ +L G  P+K +A L + +GPI+ L++G  + T+V+ + + A  + + HD SF DR + +  ++L + + + S+   P    W+  R++C + +F  ++++   ++R++ +  +L   +E        G+ I+  +  F  S N++ N IFS D+V DP  +   EF + + GIME AG PN+S+ FP LK
Sbjct:    2 GNMFDLAGSAPYKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDRPIVD--VNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESVDKMLRLDEEKASSSGGGGEGIEVTRYMFLASFNMVGNMIFSKDLVTDPESKQGSEFFNAMIGIMEWAGVPNISDIFPCLK 193          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21
Identity = 58/190 (30.53%), Postives = 101/190 (53.16%), Query Frame = 2
Query:   50 LFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSI 619
            LF+SC+L      + A+ L    + +RK  PP P  +P+IGNL +LG  PH+SL  L+K +GP+M L+ G + TVVVSS   AK  LK HD +   R       +L   +    +V+ P +  WK LR++C   +F+ +++   Q +R +++K L+    E+      ++  +   + ++ ++    F +
Sbjct:   10 LFLSCLL------LAALRLKKRRQHQRK--PPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNY--LDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFGV 189          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21
Identity = 56/218 (25.69%), Postives = 109/218 (50.00%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSER--EFKDTVWGIMEEAGKPNLSEHFP 712
            +L+L   L   +   +  R ++  LPP P   P+IGNL +LG  PH+SL  LA   GP++ L LG + T++VS+  +A+ ILK HD  F  R  P    +    +    + + P    W+ +RK+C + + + +++++ + +R +++  ++  + ++C  G+A++  +     S   ++   F        ER  +F D    +    G   + ++FP
Sbjct:    7 LLFLAIALTFFLLKLNEKREKKPNLPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASR--PSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKYEGEEERKNKFADLATELTTLMGAFFVGDYFP 222          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20
Identity = 61/203 (30.05%), Postives = 105/203 (51.72%), Query Frame = 2
Query:  125 RRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSL-----NLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLL 718
            R ++LPPGP P+P+IGN  ++    H++L  LA+ +GPI+ LR G V TVVVSS   AK  LK HD  F  R  P   +     +    + + P    W+ +RK+C + + TS+++++ + +R++++  ++  + E    G+       A +TSL      +L+   FS + +    + F D V  +    G  N+ +  P L
Sbjct:   38 RNERLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASR--PPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVGSLNIGDFIPYL 238          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20
Identity = 57/196 (29.08%), Postives = 107/196 (54.59%), Query Frame = 2
Query:  137 LPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            +PPGP   P+IG++  L G  PH+ L  LAK +GP+M L+LG+V  ++VSS   AK ++K HD +F  R  P ++ +    +    + + P    W+ +RK+CN+ + + +++ +   +R +++K+L+  +      G  ++  QA  +    + S + F    ++  + EF   V  +M+ AG  N+++ FP  K
Sbjct:   19 IPPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASR--PRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIAS--EEGSVVNLSQAIDSLIFTITSRSAFGKRYME--QEEFISCVREVMKLAGGFNIADLFPSAK 208          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.606e-20
Identity = 62/199 (31.16%), Postives = 100/199 (50.25%), Query Frame = 2
Query:  125 RRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVD---PSEREFKDTVWGIMEEAGKPNLSEHFP 712
            R ++LPPGP  +P++G L  LG  PH + A +AK +G +M L++G     + S+P  AKA LK  D +F +R        L     +  +V+    P WK LRKL N+H+   + L+   D+R+ ++  +L  + E+ +  + +   +       N+LS  I S  V +       EFKD V  +M  AG  N+ +  P
Sbjct:   37 RCRRLPPGPTGWPILGALPLLGNMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQD--MVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRRVFNKKGAKSNEFKDMVVELMTSAGYFNIGDFIP 233          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20
Identity = 54/170 (31.76%), Postives = 93/170 (54.71%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDF 562
            IS  L++ F  +           + K+LPPGP   P IG++  L GG+PH+ L  LAK +GP+M L+LG+V+ VVV+SP MAK +LK HD +F  R  P+ +      +    + + P    WK +RK+C   + +++ + +   +R  ++  L+  +  +   G+ ++F
Sbjct:    4 ISIFLFICFLFLLRKWKKYSKNSQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASR--PKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNF 171          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20
Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 2
Query:   68 LWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLV-WLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLL 517
            L L+FTL     L   +  +R+ LPPGPR  P IGNL +LG  PH+SL  L+  HGP+M L+LG + T+VVSS  MA+ I K HDS F  R      L   NR    S V + P    W+ +RK+  + + + +++ + + +R +++K LL
Sbjct:   10 LTLLFTLSLVKQLRKPTAEKRRLLPPGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGR----PSLYAANRLGYGSTVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLL 156          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 61/213 (28.64%), Postives = 109/213 (51.17%), Query Frame = 2
Query:   74 LVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFP 712
            LV  +   + +S I+R RR   PPGPR +P+IGN+L +    H+ LA LAK +G +  LR+G +    VSSP +A+ +L+  DS F +R    A+  L   +    + +    P W+ +RK+C M +F+ ++ ++   +R +  K + +    +C +GK I+ G+  F  + N+     F     +  + EF   +    +  G  N+++  P
Sbjct:   19 LVIVVSLFIFISFITRRRRPPYPPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYL--TYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRDEVDKMVRSV---SCNVGKPINVGEQIFALTRNITYRAAFG-SACEKGQDEFIRILQEFSKLFGAFNVADFIP 225          
The following BLAST results are available for this feature:
BLAST of FC929857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C98A3_ARATH3.236e-2128.88Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME3.236e-2130.93Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C71BY_ARATH5.519e-2130.53Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE9.414e-2125.69Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C75A1_PINTA1.229e-2030.05Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71DB_LOTJA1.229e-2029.08Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C75A4_GENTR1.606e-2031.16Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71D6_SOLCH2.097e-2031.76Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71A9_SOYBN2.097e-2039.07Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C84A1_ARATH2.739e-2028.64Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34001B09EF PostHarvC1 Citrus clementina cDNA clone C34001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929857 ID=FC929857; Name=FC929857; organism=Citrus clementina; type=EST; length=721bp
GATTGAGGGTTCGAAATAAAGAGAACTTAAAGTAAGCTCAAAGATGGATT
TGTTCATTAGCTGTATACTATGGCTTGTATTCACATTGGTTTGCGCGATG
GCTTTAAGTTCCATTTCTAGAGGAAGACGCAAACAGCTTCCACCGGGACC
GAGGCCATATCCGGTGATCGGAAACCTCCTGGAGCTGGGTGGTAAACCTC
ACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGCCCCATAATGAGTCTA
AGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATGGCTAA
AGCTATACTTAAAGAACATGATTCATCATTCAGAGATCGAAAGGTCCCTG
AAGCAGTCTTGTCCCTGCCTAACCGGCACCCTGAATTCAGCTTGGTCTGG
CTGCCAGTCTCACCACTATGGAAAAATCTTCGAAAACTATGCAACATGCA
TATTTTCACTAGTCAGAAACTCGATGCCAATCAAGACCTCCGACGCAAGA
AAATCAAAGACCTTCTTGCTTATGTTGATGAAAATTGCCGTATGGGCAAA
GCAATAGATTTTGGCCAAGCTGCTTTTAATACTTCACTTAATTTGTTATC
CAACACGATTTTTTCTATTGATGTCGTTGATCCCAGTGAGCGAGAGTTTA
AGGATACAGTTTGGGGTATCATGGAAGAAGCAGGAAAGCCTAACTTGTCC
GAACATTTTCCTCTACTAAAA
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