FC929857

Overview
NameFC929857
Unique NameFC929857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 48/153 (31.37%), Postives = 86/153 (56.21%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSI------SRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKI 505
            ++ ++  L+C++ L +I      SRG++   PP P   P+I NL +LG  PH+SL  L+  +GP+M L  G V  +VVSS   AK +LK HD  F  R  P + +     +    +   P    W+ ++ +C +H+F+++ + + +D+R+++I
Sbjct:    3 MMMMIILLLCSIILITILFFKKQSRGKKSNAPPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASR--PRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEI 153          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 57/198 (28.79%), Postives = 103/198 (52.02%), Query Frame = 2
Query:  134 QLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFS-LVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            +LPPGP   P++GN  +L GG  H  L  LAK +GP+M L++G+V+T+V SSP +A+ I + HD  F DR  P  + S      +FS +V  P    W+ LRK+  M + + + + + + +R +++ + +  +    + G  I+  +        + +   F     + +  EF   +  + +   +PN+++ FP LK
Sbjct:   25 ELPPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADR--PSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI--GSKEGTRINLSKEISLLIYGITTRAAFG--EKNKNTEEFIRLLDQLTKAVAEPNIADMFPSLK 216          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 53/185 (28.65%), Postives = 99/185 (53.51%), Query Frame = 2
Query:   44 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLL 598
            M + +   L  + T+V ++ L   ++  +  LPP P   P+IGNL  L G PH+   KL+  +GP++ LRLG V  VV+SS   A+A+LK +D     R  P+ V S    +    + + P    W+ +RKL  + +F+S+K+ + + +R +++  ++  V E+      +D  +  F+ + +++
Sbjct:    1 MTILLCFFLVSLLTIVSSIFLKQ-NKTSKFNLPPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSR--PKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLSKTFFSLTASII 182          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 58/220 (26.36%), Postives = 110/220 (50.00%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVD-PSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            IL L+F  +      + S+ +   LPP PR  P+IGNL +LG  PH+SL KL++ +GP+M L LG    +V SS   A+ ILK HD  +  R  P+  ++    +    + + P    W  +R +  +H+ +++++ + +D+R ++  +++  + + C     I+ G+     + N+ S         +  S  + KD +   ++     N+ ++ P LK
Sbjct:   12 ILLLLFIFLLIHHCFTTSKTQNMFLPPSPRKLPIIGNLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATR--PKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCD-ASVINLGEHLCFLTNNITSRVALGRTYDERESGIDAKDILEQFLQLLDTFNVGDYIPWLK 228          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17
Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = 2
Query:   77 VFTLVCAM-ALSSISRGRRKQLPPGPRPYPVIGNLLELG-GKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKL 472
            V   VC++ +    S G +K+ PPGP   P+IGNLL L   +PH +L  LA  HGP+M LRLGQV  VV+SSP+ A+ +L++ D++F  R  P  +++    +    + + P    W+ LRKLC   +  + K+
Sbjct:    6 VILAVCSLISRRKPSPGSKKKRPPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASR--PSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKV 137          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 58/205 (28.29%), Postives = 102/205 (49.76%), Query Frame = 2
Query:  125 RRKQLPPGPRPYPVIGNLLELGG-KPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEF------SLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSE--REFKDTVWGIMEEAGKPNLSEHFP 712
            +R +LPPGP P PVIGNLL+L    P +  A  AK +GPI+S R+G  T VV+SS  +AK +LK  D +F DR         P+R  EF       +     +P ++ +RK+   H+F+  ++   + +R ++ + ++  +++     + +D  +     + +++    F     +  E  + F   ++G     GK   S+ FP
Sbjct:   26 KRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP--------PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFP 222          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 63/225 (28.00%), Postives = 111/225 (49.33%), Query Frame = 2
Query:   74 LVFTLVCAMA-LSSISRGRR----KQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNR--HPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIME---EAGKPNLSEHFPLL 718
            ++  L+C +  L  + + RR    K  PP P   PV+GNL +LG  PH+SL  L++ +GP+M L  G V  +V SSP  A+ I+K  D +F +R      LS+P R  +    + + P    W+ +R +C + + +++++   Q  RR + ++    V++  ++ K            L  L+N +F    +    +++  T  G  E    + K NL+E + LL
Sbjct:    1 ILIALLCTLPFLFFLKKWRRSYSGKTPPPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNR----PNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRV---QSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVFCRIALG---KKYGGTTTGDGEYHVRSLKKNLAEFYVLL 215          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 2
Query:   59 SCILWLV-FTLVCAMALSSISRGRRK--------QLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIF 613
            +C+L L+   LV    L+S SR R +        +LPPGP   P++GNL  LG  PHK+L +LA+ +GP+M LRLG V TVVVSS   A+ +LK HD     R        L   +   ++ + P    W+ +RKL  + + + +++ A    R +++  L+A +D       +I      F  +  ++    F
Sbjct:   20 TCLLVLLPVLLVSYYLLTSRSRNRSRSGKLGGAPRLPPGPAQLPILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRL--SYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLNDHVFALTDGIIGTVAF 211          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17
Identity = 45/151 (29.80%), Postives = 84/151 (55.63%), Query Frame = 2
Query:   53 FISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKI 505
            F+ C +  V T++         RG+++   P P   P+IGNL +LG  PH+SL  L+  +GP+M L  G+V  +VVSS  +A+ +LK HD  F  R  P + +     + +  +   P    W+ ++ +C +H+F+++ + + +++R ++I
Sbjct:    6 FLLCSIIFVVTIII---FRKQKRGKKRNTLPSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASR--PRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEI 151          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 58/227 (25.55%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   44 MDLFISCILWLVFTLVCAMALSSISRGRRK-QLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSN-TIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLL 718
            M++ +   L L   +   +    + R   K  LPP P   P+IGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A+ +LK HD  F +R   +AV  L N   +  +V+ P    W+ ++ +C +++ T++ + + + +R +++ +++  +++      + +  +       ++ S   +      D + R+ K  V  IME  G+  + ++ P L
Sbjct:    1 MEMILMVSLCLTTLITLFLLKQFLKRTANKVNLPPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRD--VVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALGRKHSEDETARDLKKRVRQIMELLGEFPIGDYVPAL 225          
The following BLAST results are available for this feature:
BLAST of FC929857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71AO_ARATH7.459e-1831.37Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO9.742e-1828.79Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71B2_ARATH9.742e-1828.65Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME9.742e-1826.36Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C99A1_SORBI1.662e-1738.06Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C83A1_ARATH2.170e-1728.29Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71A6_NEPRA2.170e-1728.00Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71E1_SORBI2.834e-1731.444-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71AQ_ARATH3.702e-1729.80Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH6.314e-1725.55Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC34001B09EF PostHarvC1 Citrus clementina cDNA clone C34001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929857 ID=FC929857; Name=FC929857; organism=Citrus clementina; type=EST; length=721bp
GATTGAGGGTTCGAAATAAAGAGAACTTAAAGTAAGCTCAAAGATGGATT
TGTTCATTAGCTGTATACTATGGCTTGTATTCACATTGGTTTGCGCGATG
GCTTTAAGTTCCATTTCTAGAGGAAGACGCAAACAGCTTCCACCGGGACC
GAGGCCATATCCGGTGATCGGAAACCTCCTGGAGCTGGGTGGTAAACCTC
ACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGCCCCATAATGAGTCTA
AGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATGGCTAA
AGCTATACTTAAAGAACATGATTCATCATTCAGAGATCGAAAGGTCCCTG
AAGCAGTCTTGTCCCTGCCTAACCGGCACCCTGAATTCAGCTTGGTCTGG
CTGCCAGTCTCACCACTATGGAAAAATCTTCGAAAACTATGCAACATGCA
TATTTTCACTAGTCAGAAACTCGATGCCAATCAAGACCTCCGACGCAAGA
AAATCAAAGACCTTCTTGCTTATGTTGATGAAAATTGCCGTATGGGCAAA
GCAATAGATTTTGGCCAAGCTGCTTTTAATACTTCACTTAATTTGTTATC
CAACACGATTTTTTCTATTGATGTCGTTGATCCCAGTGAGCGAGAGTTTA
AGGATACAGTTTGGGGTATCATGGAAGAAGCAGGAAAGCCTAACTTGTCC
GAACATTTTCCTCTACTAAAA
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