FC929857

Overview
NameFC929857
Unique NameFC929857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 51/176 (28.98%), Postives = 92/176 (52.27%), Query Frame = 2
Query:   41 KMDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQ 568
            +M L   C+  L+  L     L  I+  + K LPP P   PVIGNL +LG  PH+ L  L+  +GP+M L  G+V  +VVS P +   I+K HD  F +R   +A+        +  +++ P    WK+++ L  +H+  ++ + + ++LR ++IK +   ++E      +++  +
Sbjct:    2 EMILISLCLTTLLAFLFLKPLLKRITTTKPK-LPPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRD--IIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSK 174          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15
Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 2
Query:   77 VFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            + TL   +AL +     +K+ PPGP   P++G LL L    P  +L +LA  +GP+M LR+GQ+ TVVVSSP+ A+ +L++ D  F  R  P  ++S    +    + + P    W+ LRKLC + + +++
Sbjct:   39 LLTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASR--PSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTK 167          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15
Identity = 60/224 (26.79%), Postives = 113/224 (50.45%), Query Frame = 2
Query:   59 SCILWLVFTLVCAMALSSISRGRRKQ--LPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            S I+ LV T   ++ +    R  + Q  LPPGP   P+IG+L  L GK P  +LA +AK +GP+  ++LG+V +VV+SS    K  +K  D +  DR   E++ +    +    +++ P S  W+ +RK+C   + +++ + +   +R+ ++  LL ++  +   G+A+D  +     + +++    F   + D    E  + V   +  A    L++ FP  K
Sbjct:    7 SAIIILVVTYTISLLIIKQWRKPKPQENLPPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRF--ESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFGSVIRD--HEELVELVKDALSMASGFELADMFPSSK 226          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15
Identity = 47/131 (35.88%), Postives = 75/131 (57.25%), Query Frame = 2
Query:   77 VFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            V TL   +AL +     +K+ PPGP   P++G LL L   +P  +L  LA  +GP+M LR GQV TVV+SSP+ A+ +L++ D +F  R  P  ++S    +    + + P    W+ LRKLC + + +++
Sbjct:   15 VVTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASR--PSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTK 143          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15
Identity = 53/198 (26.77%), Postives = 98/198 (49.49%), Query Frame = 2
Query:  128 RKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIF-SIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLL 718
            +  LPP P   PVIGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS  +A  ++K HD    +R   + + ++ N   E  +V+ P    W+ ++ +C +H+   + + +   +R ++   ++  V++       ++  +     + ++ S   F      + S  +FK+ V  I E  G   +SE+ P L
Sbjct:   29 KDNLPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGRE--VVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFGKKHSNEASMSDFKNQVRKITELVGGFPVSEYIPCL 224          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15
Identity = 56/194 (28.87%), Postives = 102/194 (52.58%), Query Frame = 2
Query:   44 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKK----IKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIF 613
            M +F+  +L L  +L+    L   S+G+   LPPGP   P+IGNL +LG   +KS  K+++ +GP++ LRLG V  +VVSS   A+ +LK HD     R  P+   +    +    + + P    W+ +RK+  + +F+ +KL + + +R ++    +K +   VDE      ++D  +  F+ + +++    F
Sbjct:    1 MSIFLCFLLLLPLSLILFKKLLP-SKGK---LPPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTR--PKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDET--QNSSVDLRKVLFSFTASIICRLAF 186          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15
Identity = 54/223 (24.22%), Postives = 111/223 (49.78%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDE-NCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            +   ++++F   C    S+      K+LPP PR  P+IGNL +LG  PH+SL KL+K +GP+M L LG    +V SS    + I+K +D  + +R  P++ ++    +    + + P    W+ +R +  +H+ +++++ + +  R ++  +++  + + +     A D        + N+++         D  E + K T+   +E  G  N+ ++ P L+
Sbjct:    2 VPLFVFILFLHKCFFTTSN----NNKKLPPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNR--PKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYND--EIDAKATLDKFVELLGTFNVGDYIPCLE 216          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15
Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = 2
Query:  137 LPPGPRPYPVIGNLLELGGKP--HKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEF-SLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLL 517
            LPPGP   P+IGN+  L G P  H  L  L+  +G +M L+LG+V+T+VVSSP  AK ++K HD  F  R     VL+      +F  + + P    W+ LRK+  + + +S+++ + Q +R + +   +
Sbjct:   35 LPPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPY---VLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFI 161          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 51/226 (22.57%), Postives = 112/226 (49.56%), Query Frame = 2
Query:   65 ILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKS----LAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSERE----FKDTVWGIMEEAGKPNLSEHFPLL 718
            I+  V   + A+    + + +   LPP P  +P++G+L +L  K        ++ +A+ +GP++ L+ G  +++  S+   A  +L+ +D     R+        P  H ++S++W   +  WK  RK+ +  IF+ + L A +  R +   +L+ ++    ++G  ++     F  +LN+L + +FS DV + S++         + G++   G  +++ +FP+L
Sbjct:    4 IVGFVSISLVALLYFLLFKPKHTNLPPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKP--HIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFI--MTKVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMDKLIHGMLMTGGDFDVASYFPVL 225          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 53/194 (27.32%), Postives = 90/194 (46.39%), Query Frame = 2
Query:   44 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDV 625
            M + +  +  L   LV    LS   +  + +LPPGP+  P+IGNL  L G PH     L++  GP+M L  G V  VV+SS   A+  LK  D     R  PE V +    +    + + P    WK LRKL  M +  ++K  + + +R ++   L+  + E+      ++  +  F    +++    F +++
Sbjct:    1 MSILLCFLCLLPVFLVSLSILSKRLKPSKWKLPPGPKTLPIIGNLHNLTGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSR--PETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNI 192          
The following BLAST results are available for this feature:
BLAST of FC929857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71AR_ARATH1.191e-1528.98Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C99A2_ORYSJ1.555e-1535.11Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71DD_MENPI1.555e-1526.79Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C99A3_ORYSJ2.031e-1535.88Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71AF_ARATH2.031e-1526.77Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH5.910e-1528.87Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71A3_SOLME5.910e-1524.22Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71D9_SOYBN7.719e-1534.62Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C80A1_BERST1.008e-1422.57Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71B7_ARATH1.008e-1427.32Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34001B09EF PostHarvC1 Citrus clementina cDNA clone C34001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929857 ID=FC929857; Name=FC929857; organism=Citrus clementina; type=EST; length=721bp
GATTGAGGGTTCGAAATAAAGAGAACTTAAAGTAAGCTCAAAGATGGATT
TGTTCATTAGCTGTATACTATGGCTTGTATTCACATTGGTTTGCGCGATG
GCTTTAAGTTCCATTTCTAGAGGAAGACGCAAACAGCTTCCACCGGGACC
GAGGCCATATCCGGTGATCGGAAACCTCCTGGAGCTGGGTGGTAAACCTC
ACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGCCCCATAATGAGTCTA
AGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATGGCTAA
AGCTATACTTAAAGAACATGATTCATCATTCAGAGATCGAAAGGTCCCTG
AAGCAGTCTTGTCCCTGCCTAACCGGCACCCTGAATTCAGCTTGGTCTGG
CTGCCAGTCTCACCACTATGGAAAAATCTTCGAAAACTATGCAACATGCA
TATTTTCACTAGTCAGAAACTCGATGCCAATCAAGACCTCCGACGCAAGA
AAATCAAAGACCTTCTTGCTTATGTTGATGAAAATTGCCGTATGGGCAAA
GCAATAGATTTTGGCCAAGCTGCTTTTAATACTTCACTTAATTTGTTATC
CAACACGATTTTTTCTATTGATGTCGTTGATCCCAGTGAGCGAGAGTTTA
AGGATACAGTTTGGGGTATCATGGAAGAAGCAGGAAAGCCTAACTTGTCC
GAACATTTTCCTCTACTAAAA
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