FC929857

Overview
NameFC929857
Unique NameFC929857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 57/223 (25.56%), Postives = 113/223 (50.67%), Query Frame = 2
Query:   59 SCILWLVFTLVCAMALSSISRGRRKQ-LPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            S I+ LV T V ++ +    +   +Q LPPGP   P++G+L  L GK P  ++A +AK +GP+  ++LG+V +VV+SS    K  +K  D +  DR   E++ +    +    +++ P S  W+ +RK+C   + +++ + +   +R+ ++  LL ++  +   G+ +D  +     + +++    F   + D    E  + V   +  A    L++ FP  K
Sbjct:    7 SAIIILVATFVASLLIKQWRKSESRQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRF--ESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSA--GETVDMTERIATLTCSIICRAAFGAIIND--HEELVELVKDSLSMASGFELADLFPSSK 223          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 2
Query:   44 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKL--------DANQDLRRKKIKDLLAYVDENCRMGKAI 556
            M +F+  +L L  +L+    L   S+G+   LPPGP+  P+IGNL + G   HKSL K+++ +GP+M L  G V  ++VSS   A+ +LK HD     R  P+ V S    +    + + P    W+ +RK+    +F+ +KL        D +Q L RK  K  L     +  + K I
Sbjct:    1 MSIFLCFLLLLPLSLIFLKKLLP-SKGK---LPPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSR--PKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVI 173          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14
Identity = 57/223 (25.56%), Postives = 113/223 (50.67%), Query Frame = 2
Query:   59 SCILWLVFTLVCAMALSSISRGRRKQ-LPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSEHFPLLK 721
            S I+ LV T V ++ +    +   +Q LPPGP   P++G+L  L GK P  ++A +AK +GP+  ++LG+V +VV+SS    K  +K  D +  DR   E++ +    +    +++ P S  W+ +RK+C   + +++ + +   +R+ ++  LL ++  +   G+ +D  +     + +++    F   + D    E  + V   +  A    L++ FP  K
Sbjct:    7 SAIIILVATFVASLLIKQWRKSESQQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRF--ESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSA--GETVDMTERIATLTCSIICRAAFGAIIND--HEELVELVKDSLSMASGFELADLFPSSK 223          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIF 613
            +S  L L+F       L       RK+LPPGP   P+IGNL +LG   H SL KL+  HGP+M +R G V   V SS   AK +LK HD    +R  P+ V +    H    + +      W+ ++K   + +F+ +K  + + +R ++   L+  +    +    +D  ++ F+ + +++    F
Sbjct:    1 MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNR--PKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAF 184          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAF 577
            IS + + + TL   +  +   +  +  LPP P  +PVIGNL ++G  PH+SL  LA+ +GP+M L  G V   VVSS   A+ +L+ HD     R  P+ V +         + + P    WK  RK     +F  +K+ + + +R ++   L+  + E+      +D  ++ F
Sbjct:    3 ISFLCFCLITLASLIFFAKKIKHLKWNLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSR--PKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLF 174          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 53/183 (28.96%), Postives = 90/183 (49.18%), Query Frame = 2
Query:   56 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEH--DSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLL 598
            IS +   + T V  +  +   +  +  LPP P  +PVIGNL ++G  PH+SL  LA+ +GP+M L  G V   VVSS   A+ +L+ H  D   R + V   +LS   +   F+    P    WK  RK     +F  +K+ + + +R ++   L+  + E+      +D  ++ F  + ++L
Sbjct:    3 ISFLCVFLITFVSLIFFAKKIKRSKWNLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFT----PYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASIL 181          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14
Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   44 MDLFI--SCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 466
            MDL +    +L L    + A+A+S + RGRR +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L      F  R R V   + +   +     +V+      W+ +R++  +  FT++
Sbjct:    1 MDLLLLEKTLLGLFIAAITAIAISKL-RGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14
Identity = 57/199 (28.64%), Postives = 99/199 (49.75%), Query Frame = 2
Query:  137 LPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGP-IMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSE----REFKDTVWGIMEEAGKPNLSEHFPLL 718
            LP  P   P+IG+L  +G  P+ SLA LA  +GP +M LRLG V TVVVSSP +A+A+L+ +D  F  R  P +++S    +      + P    ++  RKL  +H+  + K+ + +  R ++++  L  V       + +D  +   +   NL+   +     ++       RE  D   G++   G  ++ ++FP L
Sbjct:   68 LPSPPMKLPIIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSR--PRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLL---GGFHIQDYFPRL 261          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 2
Query:   74 LVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIF 613
            L F  + ++ +    +   + LPP P   PVIGNL +L G  HK L  L+K HGP++ LRLG +  VV+SS   A+  LK HD     R +      L     +  L   P     + LRKL  +  F++ K+ + + +R ++   ++  + E      ++D  Q  F    +++  + F
Sbjct:    5 LYFIALLSLIIIKKIKDSNRNLPPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLA--PYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAF 182          
BLAST of FC929857 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14
Identity = 59/193 (30.57%), Postives = 92/193 (47.67%), Query Frame = 2
Query:   50 LFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSI 619
            L +   L  +F  + A    S  RG+R +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP++AK +L      F  R R V   + +   +     +V+      W+ +R++  +  FT++ +   Q  R     +  A VD+  +  KA   G         ++ N +F I
Sbjct:    4 LLVEKTLLALFAAIIASIFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYGEHWRKMRRIMTVPFFTNKVV---QQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRI 189          
The following BLAST results are available for this feature:
BLAST of FC929857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C7D95_MENSP1.317e-1425.56Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71B5_ARATH1.317e-1432.40Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENGR1.720e-1425.56Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BU_ARATH2.246e-1428.49Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH2.933e-1428.74Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH2.933e-1428.96Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
TCMO_GLYEC5.003e-1435.62Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71C4_MAIZE5.003e-1428.64Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BO_ARATH5.003e-1428.33Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ZINEL8.534e-1430.57Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34001B09EF PostHarvC1 Citrus clementina cDNA clone C34001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929857 ID=FC929857; Name=FC929857; organism=Citrus clementina; type=EST; length=721bp
GATTGAGGGTTCGAAATAAAGAGAACTTAAAGTAAGCTCAAAGATGGATT
TGTTCATTAGCTGTATACTATGGCTTGTATTCACATTGGTTTGCGCGATG
GCTTTAAGTTCCATTTCTAGAGGAAGACGCAAACAGCTTCCACCGGGACC
GAGGCCATATCCGGTGATCGGAAACCTCCTGGAGCTGGGTGGTAAACCTC
ACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGCCCCATAATGAGTCTA
AGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATGGCTAA
AGCTATACTTAAAGAACATGATTCATCATTCAGAGATCGAAAGGTCCCTG
AAGCAGTCTTGTCCCTGCCTAACCGGCACCCTGAATTCAGCTTGGTCTGG
CTGCCAGTCTCACCACTATGGAAAAATCTTCGAAAACTATGCAACATGCA
TATTTTCACTAGTCAGAAACTCGATGCCAATCAAGACCTCCGACGCAAGA
AAATCAAAGACCTTCTTGCTTATGTTGATGAAAATTGCCGTATGGGCAAA
GCAATAGATTTTGGCCAAGCTGCTTTTAATACTTCACTTAATTTGTTATC
CAACACGATTTTTTCTATTGATGTCGTTGATCCCAGTGAGCGAGAGTTTA
AGGATACAGTTTGGGGTATCATGGAAGAAGCAGGAAAGCCTAACTTGTCC
GAACATTTTCCTCTACTAAAA
back to top