FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NUDF_ASPFU (Nuclear distribution protein nudF homolog OS=Aspergillus fumigatus GN=nudF PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 57/192 (29.69%), Postives = 86/192 (44.79%), Query Frame = 2 Query: 212 GHQSAVYTMKVNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ--------IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSF---------------------SDASE*IYTGGIDNDVKVWDLR 691 GH AV + GT++AS S D I LW + KN L GH +++ + + G+ ++SAS DKTLR WDV TG +K ++ H +V + PS G L+ +G DD +LWD+ TF ++ I V+ S ++E TG D +++WD R Sbjct: 155 GHTKAVLDVDYGGPRGGTLLASCSSDLTIKLWDPSDNYKNIRTLPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIWDVTTGYCVKTLSGHVDWVRAVAPSIDGRFLLAAG-DDRIPRLWDLSSAETKSTFLGHEHVIECVAIAPAASYPHLAVLSGLKKPPPASSSAEFFATGSRDKTIRLWDSR 345 HSP 2 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 54/180 (30.00%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW--TTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSC--CPS-RRGPP----LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 +L GH++ V + +P + +ASGS D I +W G+ + +KGH A+LD+ + G+ + S S D T++ WD + K I+ + H+ V+S PS G P L+VS S D T ++WD+ ++T + AV+ S + G D ++WDL E+K Sbjct: 110 ILEGHRNPVTCVAFHPVFSSLASGSDDTTIKIWDWELGELER--TVKGHTKAVLDVDYGGPRGGTLLASCSSDLTIKLWDPSDNYKNIRTLPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIWDVTTGYCVKTLSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLWDLSSAETK 287
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: YQ95_SCHPO (Uncharacterized WD repeat-containing protein C18.05c OS=Schizosaccharomyces pombe GN=SPCC18.05c PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 46/152 (30.26%), Postives = 74/152 (48.68%), Query Frame = 2 Query: 230 YTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVW 682 Y + +G + S S D + LW K + GH+ + ++ DG I +AS D ++R WD +TGK + + H + V C S L+VS S D T K+WD+R + P + Q+ AV +S + + +GG D V++W Sbjct: 350 YEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWS-TDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500 HSP 2 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 49/180 (27.22%), Postives = 81/180 (45.00%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPA-GTVIASGSHDRDIFLWHVHGDCKN---FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC------PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESKH 709 + GH + + + +P+ + + +GS D LW DC +KGH N + + W D S I + S D T+R WD + G I + H + + C GP L+ SGS D T ++W+++ R + T IT V + IY+ D +++WD + G+ H Sbjct: 130 MNGHDGTIISAQFSPSTSSRLVTGSGDFTARLW----DCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIWDAKDGKCLH 304
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_XENTR (WD repeat-containing protein 48 OS=Xenopus tropicalis GN=wdr48 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ I+S S +K LR WD T +++ K+ H V + +R G +SGS DGT +LW + Q+ I T+ + + A+ ++ +Y+GG D + DLR Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKALLLNRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEGFTHVYSGGRDRKIYCTDLR 282
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR31_MOUSE (WD repeat-containing protein 31 OS=Mus musculus GN=Wdr31 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 50/175 (28.57%), Postives = 75/175 (42.86%), Query Frame = 2 Query: 209 TGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQI-----------TAVSFSDASE*IYTGGIDNDVKVWDLRK 694 TGH+ + + P S S D+ + +W + G L GH + L + D SQ+ + S D +L WDV TG+ +++ + + V C PS P +V S+D T +LWD R FP K I T +S S GG + +WDLR+ Sbjct: 100 TGHEREITKIACIPKANQFFSASRDKTVLMWDLQGSSHPRQQLSGHAMVVTGLAVSPDSSQLCTGSRDNSLLLWDVGTGQCVERASVSRNLVTHLCWVPSE---PYIVQTSEDKTIRLWDSRGLQMAHMFPTKQHIQTHCEVSVDGHTCISCSSG-----FGGEGCEATLWDLRQ 266
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 52/193 (26.94%), Postives = 88/193 (45.60%), Query Frame = 2 Query: 149 APGPNGKQRTSSLESPIMLLTGHQSA--------VYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGES 703 A G N +++ L T H+ + V T+ +P G + +G+ DR I LW + + V GH+ I L ++ +G I+S S D+T R WDVETG+ I K+ N + + GS D ++W + + K + +++FS S + +G +D +KVW+L+ S Sbjct: 329 ATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRY-VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGV--TAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRS 518
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 51/178 (28.65%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 161 NGKQRTSSLES--PIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDA-SE*IYTGGIDNDVKVW 682 +G + SL+S P+ + GH V + +P+G + + +DR LW + + + +GH + D+ + DGS + D R WD+ TG+ I + H + S G + +GS D T K+WD+RQR + T P + +T V F + + TG DN K+W Sbjct: 301 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP17_MOUSE (Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 50/169 (29.59%), Postives = 83/169 (49.11%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASE*IYTGGIDNDVKVWD 685 I + +GH V +++ P +G ++ S S D I LW V+GD + GH A+ D+ + T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D WD+R +Q + D++ + + F D + + D ++VW+ Sbjct: 281 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWE 446
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 50/190 (26.32%), Postives = 90/190 (47.37%), Query Frame = 2 Query: 80 ENALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESP--IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI-QTFPDKYQITAVSF 625 +N + ++S +V +++ + A +G + LE + LTGH++++ M +P G +ASGS D ++ LW V C KGH + + + ++ DG +++AS D T++ WD+ GK ++ H V L+ SGS D T + WD+ + T P + ++SF Sbjct: 49 QNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGC--IYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTG-IEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISF 235
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR88_HUMAN (WD repeat-containing protein 88 OS=Homo sapiens GN=WDR88 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 194 PIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSD-DGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASE*IYTGGIDNDVKVWDL 688 P +L+GH+ AV T T + SGS+D + LW V G + K +++ T D S++I+AS DKT+RAWD+ETGK + K+ +++F+ SC S G VVSG D D + D + D + IT+ F S+ + + +D +K+WD+ Sbjct: 94 PFKILSGHEHAVSTCHFCVDDTKLLSGSYDCTVKLWDPVDGSVVRDFEHRP-KAPVVECSITGDSSRVIAASYDKTVRAWDLETGKLLWKV-RYDTFIVSCKFSPDG-KYVVSGFDVDHGICIMDAENITTVSVIKDHHTRSITSCCFDPDSQRVASVSLDRCIKIWDV 259
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WD51B_MOUSE (WD repeat-containing protein 51B OS=Mus musculus GN=Wdr51b PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 49/172 (28.49%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 179 SSLESPIM--LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWD 685 S LE PI+ GH++A+ + +P IA+ S D + LW + + + + GHK+ + L ++ G+ + SAS D+T+R W ++ + + H + V S S G L+V+ S+D + K+W M RQR + + + FS I + D +K+WD Sbjct: 3 SGLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADG-QLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |