FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR12_BRUMA (Ribosome biogenesis protein WDR12 homolog OS=Brugia malayi GN=Bm1_47965 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 53/208 (25.48%), Postives = 97/208 (46.63%), Query Frame = 2 Query: 176 TSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKN------------------------FMVLKGHKNAILDLHWTTDGS-QIISASPDKTLRAWDVETGKQIKKMAEHNSF--VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI---QTFPDKY-QITAVSFSDASE*IY-TGGIDNDVKVWDLRKGES 703 +S+ P +L GH+ +V + VN GT SG D+ + +W+ D + + L GHK+AI+ W+ + + ++++ S D T+ WD+E QI +A +F ++ CC S ++++GS D +LWD R Q+F I++V ++ E ++ + D VK+WD+R ++ Sbjct: 191 SSTFIKPTCVLRGHERSVEAIAVNTDGTRTVSGGFDKMLKVWNTDKDDTSTVFEKTRSEKTGKKKRTDIITKIPMVTLSGHKDAIVSAVWSPNSAKEVLTVSWDHTISIWDLELAGQINTLAAKKAFTSISVCCSS----GMLITGSVDPVVRLWDPRSHEGTLVKQSFIGHCGWISSVFWNKVKENLFISASFDKTVKMWDVRSNKT 394
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 44/172 (25.58%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 179 SSLESPIM--LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWD 685 S+ E P++ GH++A+ ++ ++P G +A+ S D + LW+ + + + GHK+ + + ++ G+ + SAS D+T+R W + + + H + V S S G + + S+D + K+W M RQR + + + FS I + D +K+WD Sbjct: 3 SATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 44/172 (25.58%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 179 SSLESPIM--LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWD 685 S+ E P++ GH++A+ ++ ++P G +A+ S D + LW+ + + + GHK+ + + ++ G+ + SAS D+T+R W + + + H + V S S G + + S+D + K+W M RQR + + + FS I + D +K+WD Sbjct: 3 SATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 48/165 (29.09%), Postives = 76/165 (46.06%), Query Frame = 2 Query: 200 MLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLR 691 +L GH V+ + ++P ASGSHDR LW + GH + + + + + + + S DKT+R W + G ++ H V S S G L +G +D KLWD+ + IT+++FS S I + +DN V+VWD+R Sbjct: 378 VLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAG-EDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540 HSP 2 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 43/151 (28.48%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 131 PYSAPQAPGPNGKQRTSSLES-----PIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 568 P+S A G + RT+ L S P+ + GH + V +K +P +A+GS D+ + LW + + GH+ +L L ++ +G + SA D+ L+ WD+ +G K++ H + S S L+ S S D + ++WD+R Sbjct: 394 PFSLYFASGSH--DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFS-PDSGLIASASMDNSVRVWDIR 540
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 48/168 (28.57%), Postives = 84/168 (50.00%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 L GH++ VY ++ N P G IA+GS D+ LW G C + +GH I+ L + + I + S D T + WD+++G++ ++ H + + S + G L ++GS D T +W++ I T + +I++ F+ I T +D K+WD G+ Sbjct: 130 LEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKC--YHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRL-ITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGK 294 HSP 2 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 41/158 (25.95%), Postives = 74/158 (46.84%), Query Frame = 2 Query: 212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVW 682 GH + + + NP T+IA+GS D LW + + + L GH I+ L + T G ++I+ S D T+ W++ +G++I + H ++S L+ + S D + KLWD + T ++ V+F + + T D +V+ Sbjct: 175 GHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSG-EEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISS-AQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVY 330 HSP 3 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 45/164 (27.44%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLW-HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVW 682 I L GH+ + + + N ++IA+ S D+ LW ++G C L GH + +LD+ + + G + +AS D T R + + K + K+ H ++ C + +G +V+ S D T++LWD +Q +I + +F+ I TG DN ++W Sbjct: 254 IHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKC--VATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQG-NRIVTASSDKTSRLWDPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNTCRIW 414 HSP 4 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 44/168 (26.19%), Postives = 76/168 (45.24%), Query Frame = 2 Query: 200 MLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 + L+GH + + ++ N G + +GS D + +W + + L GH+ I + D S I +AS DK+ + WD GK + + H+ V G LV + S DGTA+++ R + + +I+ + F+ I T D ++WD GE Sbjct: 213 LTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSG-RRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTG-QLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGE 378
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR37_PONAB (WD repeat-containing protein 37 OS=Pongo abelii GN=WDR37 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 43/141 (30.50%), Postives = 66/141 (46.81%), Query Frame = 2 Query: 305 VHGDCKNFMV----LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMRQRG--AIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGES 703 V DC V LK H+ ++ W G Q ++AS D+T +DVET + + + H+ + CC P++R LVV+ S D T +LWD R ++ F + + + +G D VKVWDL+ S Sbjct: 264 VSSDCPTIRVPLTSLKSHQGVVIAADWLVGGKQAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQR---LVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWDLKNMRS 401
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_XENTR (U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus tropicalis GN=utp15 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 45/170 (26.47%), Postives = 75/170 (44.12%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + PI + + Y G ++A+G D + L+ + G GH A+ + +T D +I+S S D T R WD+ G +I EH ++ C S L +GS D T K++D R ++ + + +V + + + G VKVWD+ KG Sbjct: 70 QEPIKTFSRFKDTAYCGTFRGDGKLLAAGCEDSVVQLFDISGKAA-LRQFSGHSKAVHFVDFTADKYRIVSGSDDYTSRLWDIPNGVEITSYNEHTDYIRCGCTSALNNDLFATGSYDHTIKIFDGRTDKSVMSMDHGQPVESVLLFPSGGLLVSAG-GRYVKVWDILKG 237
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_PONAB (U3 small nucleolar RNA-associated protein 15 homolog OS=Pongo abelii GN=UTP15 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 42/170 (24.71%), Postives = 78/170 (45.88%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + I + + Y G +I +GS D + L+ + G +GH A+ + +T D ++S + D T++ WD+ K++ EH+ +V C S+ P L ++GS D T K++D R ++ + + +V + + + G VKV D+ KG Sbjct: 70 QESIKTFSRFKDTAYCATFRQDGRLIVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEVLTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAG-GRYVKVCDMLKG 237
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TUP1_YEAST (General transcriptional corepressor TUP1 OS=Saccharomyces cerevisiae GN=TUP1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 43/162 (26.54%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 245 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD--------KYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 +P G +A+G+ DR I +W + K M+L+GH+ I L + G +++S S D+T+R WD+ TG Q V + S + +GS D ++WD ++ K + +V F+ + + +G +D VK+W+L+ +K Sbjct: 452 SPDGKFLATGAEDRLIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 611 HSP 2 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 50/188 (26.60%), Postives = 84/188 (44.68%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM-------AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG-------------AIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 +M+L GH+ +Y++ P+G + SGS DR + +W + G C + ++ + DG I + S D+ +R WD ETG ++++ H V S +R G VVSGS D + KLW+++ + K + +V+ + E I +G D V WD + G Sbjct: 478 VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS--PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 662
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 46/159 (28.93%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 245 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEH----NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 +P G +A+G+ D+ + +W +H K GH+ I L +++DG I+S S DK + WD+E GK + + V S S G LV +GS D +LWD + ++ + + +V+FS + + +G +D +K+WDL S+ Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTK-KIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDG-RLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSR 492 HSP 2 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 2 Query: 212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLK--GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-----RQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 GH+ +Y++ + G I SGS D+ +W + G C + + G KN + + + DG + + S D +R WD +TG +++ H V S S G L SGS D + KLWD+ R R K + +V+FS + +G D V+ WD R G Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL-ASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535 HSP 3 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 38/123 (30.89%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGD-----CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLW 559 GH +VY++ +P G +ASGS D+ + LW + G C+ GHK+ +L + ++ DGS +IS S D++++ WD G + H + V S P + +GS D ++LW Sbjct: 455 GHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCR--ATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |