FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR37_XENTR (WD repeat-containing protein 37 OS=Xenopus tropicalis GN=wdr37 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 50/207 (24.15%), Postives = 81/207 (39.13%), Query Frame = 2 Query: 212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWH-----------------------------------VHGDCKNFMV----LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMRQRG--AIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGES 703 GH +V ++K +P + + S D+ +W DC V LK H+ ++ W G Q ++AS D+T +DVET + + + H+ + CC P++R LVV+ S D T +LWD R ++ F + + + +G D VKVWDL+ S Sbjct: 197 GHAGSVNSIKFHPTEQIALTASGDQTAHIWRYMVQLPTPQPTADTSISGEEEVDFSDKDENDGDGDASSDCPTVRVPLTALKSHQGVVIAADWLVGGKQAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQR---LVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWDLKNMRS 400
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TIPD_DICDI (Protein tipD OS=Dictyostelium discoideum GN=tipD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 50/180 (27.78%), Postives = 81/180 (45.00%), Query Frame = 2 Query: 209 TGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEH------NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGG---------IDNDVKVWDLRKGE 700 TGH S +Y M N G ++A+G D+ + +W V G K+ L G +I+ + ++ + I+ S D + R W+ E G+ + H F+NS VV+GS D T KLWD+++ +T FS ++ + GG +D+ V+ WD GE Sbjct: 321 TGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKS--TLLGASQSIVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINS--------NRVVTGSHDRTIKLWDLQKGYCTRTI--------FCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGE 482
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: SMU1_DICDI (WD40 repeat-containing protein smu1 OS=Dictyostelium discoideum GN=smu1 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 42/139 (30.22%), Postives = 66/139 (47.48%), Query Frame = 2 Query: 215 HQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFS 628 H A+ + + G +A+GS D I +W + G C H N + L ++ + +QI+S S D +L+ +++GK +K H SFVN CC V+S S DG K+WD + +QT +T S Sbjct: 274 HDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFE-PAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCC-FNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDIS 410
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DROVI (WD repeat-containing protein 48 homolog OS=Drosophila virilis GN=GJ15009 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 43/162 (26.54%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688 LTG + ++Y++ +NP+GTVI SGS + + +W C M L+GH + L + DG+Q++S S D T++ W++ + I+ + H V S S ++SGS D + +MR + +K + ++ ++ ++ ++D++ W L Sbjct: 162 LTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR-TCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCIQTIHVHKEGVWSLLMSENF-QYIISGSRDRNIIVTEMRNPSNKMLVCEEKAPVLSLGYNIDKTGVWATTWNSDIRCWKL 321 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + +AS D+ IFLW V+ + L G K++I L G+ I+S S + LR WD T + K+ H V S G VVSGS DGT K+W++ Q+ IQT K + ++ S+ + I +G D ++ V ++R +K Sbjct: 111 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQ-VVSGSSDGTIKVWNLGQQRCIQTIHVHKEGVWSLLMSENFQYIISGSRDRNIIVTEMRNPSNK 285
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DROSI (WD repeat-containing protein 48 homolog OS=Drosophila simulans GN=GD25924 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 52/176 (29.55%), Postives = 81/176 (46.02%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + +AS D+ IFLW V+ + L G K++I L G+ I+S S + LR WD T +I K+ H V S G VVSGS DGT K+W++ Q+ +QT K + ++ S+ + I +G D ++ V ++R +K Sbjct: 111 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRIMKLRGHTENVRCLVVSPDGNQ-VVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENFQYIISGSRDRNIIVTEMRNPSNK 285 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 41/162 (25.31%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688 LTG + ++Y++ +NP+GTVI SGS + + +W C M L+GH + L + DG+Q++S S D T++ W++ + ++ + H V S S ++SGS D + +MR ++ + ++ ++ ++ ++D++ W L Sbjct: 162 LTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR-TCMRIMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENF-QYIISGSRDRNIIVTEMRNPSNKTLVCEEQAPVLSLGYNIDKTGVWATTWNSDIRCWKL 321
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DROSE (WD repeat-containing protein 48 homolog OS=Drosophila sechellia GN=GM20456 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 52/176 (29.55%), Postives = 81/176 (46.02%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + +AS D+ IFLW V+ + L G K++I L G+ I+S S + LR WD T +I K+ H V S G VVSGS DGT K+W++ Q+ +QT K + ++ S+ + I +G D ++ V ++R +K Sbjct: 111 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRIMKLRGHTENVRCLVVSPDGNQ-VVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENFQYIISGSRDRNIIVTEMRNPSNK 285 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 41/162 (25.31%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688 LTG + ++Y++ +NP+GTVI SGS + + +W C M L+GH + L + DG+Q++S S D T++ W++ + ++ + H V S S ++SGS D + +MR ++ + ++ ++ ++ ++D++ W L Sbjct: 162 LTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR-TCMRIMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENF-QYIISGSRDRNIIVTEMRNPSNKTLVCEEQAPVLSLGYNIDKTGVWATTWNSDIRCWKL 321
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DROMO (WD repeat-containing protein 48 homolog OS=Drosophila mojavensis GN=GI19644 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 43/162 (26.54%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688 LTG + ++Y++ +NP+GTVI SGS + + +W C M L+GH + L + DG+Q++S S D T++ W++ + I+ + H V S S ++SGS D + +MR + +K + ++ ++ ++ ++D++ W L Sbjct: 162 LTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR-TCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCIQTIHVHKEGVWSLLMSENF-QYIISGSRDRNIIVTEMRNPSNKMLVCEEKAPVLSLGYNIDKTGVWATTWNSDIRCWKL 321 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + +AS D+ IFLW V+ + L G K++I L G+ I+S S + LR WD T + K+ H V S G VVSGS DGT K+W++ Q+ IQT K + ++ S+ + I +G D ++ V ++R +K Sbjct: 111 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQ-VVSGSSDGTIKVWNLGQQRCIQTIHVHKEGVWSLLMSENFQYIISGSRDRNIIVTEMRNPSNK 285
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR37_XENLA (WD repeat-containing protein 37 OS=Xenopus laevis GN=wdr37 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 42/138 (30.43%), Postives = 65/138 (47.10%), Query Frame = 2 Query: 314 DCKNFMV----LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMRQRG--AIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGES 703 DC V LK H+ ++ W G Q ++AS D+T +DVET + + + H+ + CC P++R LVV+ S D T +LWD R ++ F + + + +G D VKVWDL+ S Sbjct: 267 DCPTVRVPLTALKSHQGVVIAADWLVGGKQAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQR---LVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWDLKNMRS 401
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_XENLA (U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus laevis GN=utp15 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 43/170 (25.29%), Postives = 76/170 (44.71%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + P+ + + Y G ++A+G D + L+ + G GH A+ + +T+D +I+S S D T + WD+ G +I EH ++ C S L +GS D T K++D R ++ + + +V + + + G VKVWD+ KG Sbjct: 70 QEPVKTFSRFKDTAYCGTYRGDGKLLAAGCEDSVVQLFDISGKAA-LRQFSGHSKAVHFVDFTSDKYRIVSGSDDYTSKLWDIPNGIEIASYKEHTDYIRCGCTSSLNNDLFATGSYDHTIKVFDGRTDKSVMSMDHGQPVESVLLFPSGGLLVSAG-GRYVKVWDILKG 237
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 48/163 (29.45%), Postives = 80/163 (49.08%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD----KYQITAVSFSDASE*IYTGGIDNDVKVW 682 L GH+ V + +P G +IAS S D I LW V K VLKGH+ ++ + ++ D Q+ S DK W+V++G+++ + H + S S L +GS D T +WD+R + ++ + I+ + +S AS + +G D + VW Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDV-ARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSL-ATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYS-ASGLLASGSWDKTICVW 223 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |