FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PWP2_NEUCR (Periodic tryptophan protein 2 homolog OS=Neurospora crassa GN=B18D24.40 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 42/172 (24.42%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDR-DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASE*IYTGGIDN-DVKVWDLRKGE 700 I L+ Q+ + + +N +G +A G+ + +W + + +GH +++ L ++ DG +I++ + D ++ WD E+G I EH S + +C S++G L S S DG+ + WD+ + +TF P++ + ++ + E + G +D+ D+ +W ++ G+ Sbjct: 289 IHTLSISQNEIDFVTINKSGEWLAFGASKLGQLLVWEWQSE-SYILKQQGHFDSMNSLVYSPDGQRIVTVADDGKIKVWDTESGFCIVTFTEHTSGITACEFSKKGNVLFTS-SLDGSIRAWDLIRYRNFRTFTAPERLSFSCMAVDPSGEIVAAGSVDSFDIHIWSVQTGQ 458
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PLRG1_RAT (Pleiotropic regulator 1 OS=Rattus norvegicus GN=Plrg1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 47/169 (27.81%), Postives = 80/169 (47.34%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE-*IYTGGIDNDVKVWDLRKGESK 706 +++GH V + V P +GS DR I +W + K + L GH + + + +T + S DK ++ WD+E K I+ H S V ++V+ S D TA++WD+R + ++ T A A+E I TG D +++WDL G+++ Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDL-ASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYG-LDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTR 365 HSP 2 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 52/179 (29.05%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL-----DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD-------MRQRGAIQ--TFPDKYQITAVSFSDASE*IYTGGIDNDVKVW 682 ++ + L+GH +AV T++ A I +GSHD I LW + K + L HK ++ LH+T S SPD ++ W G I+ ++ HN+ +N+ + G ++VSG+D+GT LWD R A+Q + + I A +F + + T D +KV+ Sbjct: 320 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG-KTRVTLTNHKKSVRAVVLHPLHYT-----FASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNTDG--VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 489
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PLRG1_MOUSE (Pleiotropic regulator 1 OS=Mus musculus GN=Plrg1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 47/169 (27.81%), Postives = 80/169 (47.34%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE-*IYTGGIDNDVKVWDLRKGESK 706 +++GH V + V P +GS DR I +W + K + L GH + + + +T + S DK ++ WD+E K I+ H S V ++V+ S D TA++WD+R + ++ T A A+E I TG D +++WDL G+++ Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDL-ASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYG-LDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTR 364
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PLRG1_HUMAN (Pleiotropic regulator 1 OS=Homo sapiens GN=PLRG1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 47/169 (27.81%), Postives = 80/169 (47.34%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE-*IYTGGIDNDVKVWDLRKGESK 706 +++GH V + V P +GS DR I +W + K + L GH + + + +T + S DK ++ WD+E K I+ H S V ++V+ S D TA++WD+R + ++ T A A+E I TG D +++WDL G+++ Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDL-ASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYG-LDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTR 365 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 49/174 (28.16%), Postives = 83/174 (47.70%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD-------MRQRGAIQ--TFPDKYQITAVSFSDASE*IYTGGIDNDVKVW 682 ++ + L+GH +AV T++ A I +GSHD I LW + K + L HK ++ + S SPD ++ W G I+ ++ HN+ +N+ + G ++VSG+D+GT LWD R A+Q + + I A +F + + T D +KV+ Sbjct: 320 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG-KTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG--VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 489
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PLRG1_BOVIN (Pleiotropic regulator 1 OS=Bos taurus GN=PLRG1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 47/169 (27.81%), Postives = 80/169 (47.34%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE-*IYTGGIDNDVKVWDLRKGESK 706 +++GH V + V P +GS DR I +W + K + L GH + + + +T + S DK ++ WD+E K I+ H S V ++V+ S D TA++WD+R + ++ T A A+E I TG D +++WDL G+++ Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDL-ASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYG-LDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTR 364 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 49/174 (28.16%), Postives = 83/174 (47.70%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD-------MRQRGAIQ--TFPDKYQITAVSFSDASE*IYTGGIDNDVKVW 682 ++ + L+GH +AV T++ A I +GSHD I LW + K + L HK ++ + S SPD ++ W G I+ ++ HN+ +N+ + G ++VSG+D+GT LWD R A+Q + + I A +F + + T D +KV+ Sbjct: 319 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG-KTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG--VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 488
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: MORG1_RAT (Mitogen-activated protein kinase organizer 1 OS=Rattus norvegicus GN=Morg1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 55/186 (29.57%), Postives = 85/186 (45.70%), Query Frame = 2 Query: 158 PNGKQRTSSL-ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR--GAIQTFPD-KYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 P K R L + L Q AV ++ N G + D+ + LW+ + G GH +LD + D S + S DKT+ WDV TG+ ++K H VN+ +++SGS D + + WD R R +QT + + I++V SD I G +D V+ +DLR G+ Sbjct: 4 PEPKPRAPELPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNT-VQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--ILAGSVDGRVRRYDLRMGQ 184
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: CAF4_CANGA (CCR4-associated factor 4 homolog OS=Candida glabrata GN=CAF4 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 54/192 (28.12%), Postives = 91/192 (47.40%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH------GDCKNFMVLK---GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIK--------KMAEHNSFVNSCCPSRRGPPL---------VVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 +L+GH++ V T + ++AS D + +W V G+ + + L GHK+++ L T G+ I+S S DKTLR WD+ +GK I+ KM + PS P + +V+G+ DG LWD+R + + + IT++ + + + TG +D ++WDLR G Sbjct: 318 VLSGHRATVNTTRFIDDTRLLASAGKDASVKVWDVDNIVDKDGNANDNLCLATFDGHKDSVTAL--ATTGNAIVSGSNDKTLRHWDLGSGKCIQSIDLTIALKMVPQSVSKLDITPSFNTPLIGGADCIDNALVTGTKDGIVYLWDLRIGRVVGSLEGHRGPITSLKYMGSE--LITGSMDKSTRIWDLRMG 505
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR86_HUMAN (WD repeat-containing protein 86 OS=Homo sapiens GN=WDR86 PE=5 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 47/151 (31.13%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 251 AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 AG ++ +GS D +W V C + L+GH A+L L T G + S D T+RAWD+ +G+Q++ EH V R LV SGS D T K W ++TF + ++A+ + + ++TG D + +D + GE Sbjct: 277 AGGLLVTGSTDGTAKVWQVASGCCH-QTLRGHTGAVLCLVLDTPGHTAFTGSTDATIRAWDILSGEQLRVFREHRGSVICLELVNR---LVYSGSADRTVKCWLADTGECVRTFTAHRRNVSALKYHAGT--LFTGSGDACARAFDAQSGE 421
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DROPS (WD repeat-containing protein 48 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21511 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 42/162 (25.93%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688 LTG + ++Y++ +NP+GTVI SGS + + +W C M L+GH + L + DG+Q++S S D T++ W++ + ++ + H V S S ++SGS D + +MR +K + ++ ++ ++ ++D++ W L Sbjct: 162 LTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR-TCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENF-QYIISGSRDQNIIVTEMRNPSNKTLVCEEKAPVLSLGYNMDKTGVWATTWNSDIRCWKL 321 HSP 2 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + +AS D+ IFLW V+ + L G K++I L G+ I+S S + LR WD T + K+ H V S G VVSGS DGT K+W++ Q+ +QT K + ++ S+ + I +G D ++ V ++R +K Sbjct: 111 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQ-VVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENFQYIISGSRDQNIIVTEMRNPSNK 285
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DROPE (WD repeat-containing protein 48 homolog OS=Drosophila persimilis GN=GL16745 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 42/162 (25.93%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688 LTG + ++Y++ +NP+GTVI SGS + + +W C M L+GH + L + DG+Q++S S D T++ W++ + ++ + H V S S ++SGS D + +MR +K + ++ ++ ++ ++D++ W L Sbjct: 162 LTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR-TCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENF-QYIISGSRDQNIIVTEMRNPSNKTLVCEEKAPVLSLGYNMDKTGVWATTWNSDIRCWKL 321 HSP 2 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + +AS D+ IFLW V+ + L G K++I L G+ I+S S + LR WD T + K+ H V S G VVSGS DGT K+W++ Q+ +QT K + ++ S+ + I +G D ++ V ++R +K Sbjct: 111 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQ-VVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENFQYIISGSRDQNIIVTEMRNPSNK 285 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |