FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_CULQU (WD repeat-containing protein 48 homolog OS=Culex quinquefasciatus GN=CpipJ_CPIJ014111 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 51/171 (29.82%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + +AS D+ IFLW V+ + + G K++I L G+ I+S S + TLR WD T +I K+ H V + S G VVSGS DG KLW + Q+ IQT + + A+ +D + +G D + + +LR Sbjct: 99 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSITGSKDSIYSLAMNPSGTIIVSGSTENTLRIWDPRTCNKIAKLKGHTENVKALVVSEDGTQ-VVSGSSDGKIKLWSIGQQRCIQTISVHSEGVWALLMTDNFSHVISGSRDKKIVMTELR 268
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NUDFB_NEUCR (Nuclear distribution protein pac-1b OS=Neurospora crassa GN=pac-1b PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 42/130 (32.31%), Postives = 65/130 (50.00%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ--------IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 565 + GH AV + GT++AS S D I LW + KN L GH + + + + G+ ++SAS D +L+ WDV TG +K + H + + CPS G L+ +GSD + +LWD+ Sbjct: 162 IKGHTKAVLDVDFGGPRGGTLLASCSSDLTIKLWDPSDEYKNIRTLPGHDHIVSSVRFIPSGAAGAPASGNLLVSASKDNSLKIWDVTTGYCVKTILGHVDWPRAVCPSHDGRYLLSTGSDK-SVRLWDL 290
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1_CAEEL (Lissencephaly-1 homolog OS=Caenorhabditis elegans GN=lis-1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 46/181 (25.41%), Postives = 79/181 (43.65%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFS---------------DASE*IYTGGIDNDVKVWDLRKGE 700 L GH AV + ++ AG + S S D I LW LKGH++ + + + G ++SAS D T++ WD+ TG + HN +V S G L S S D T +W + A D ++ + V ++ +++ +++G D +K W++ G+ Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDG-TLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGD 323
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: GBLP_DANRE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Danio rerio GN=gnb2l1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 55/170 (32.35%), Postives = 81/170 (47.65%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ--RGAIQTFPDKYQITAVSFS--DASE*IYTGGIDNDVKVWDL 688 L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+ ++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T KLW+ + IQ ++ V FS ++ I + G D VKVW+L Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQ-IVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL 179
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DROGR (WD repeat-containing protein 48 homolog OS=Drosophila grimshawi GN=GH21936 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 42/162 (25.93%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688 LTG + ++Y++ +NP+GTVI SGS + + +W C M L+GH + L + DG+Q++S S D T++ W++ + I+ + H V S S ++SGS D + ++R + +K + ++ ++ ++ ++D++ W L Sbjct: 162 LTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR-TCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCIQTIHVHKEGVWSLLMSENF-QYIISGSRDRNIIVTEIRNPSNKMLVCEEKAPVLSLGYNIDKTGVWATTWNSDIRCWKL 321 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + +AS D+ IFLW V+ + L G K++I L G+ I+S S + LR WD T + K+ H V S G VVSGS DGT K+W++ Q+ IQT K + ++ S+ + I +G D ++ V ++R +K Sbjct: 111 LRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQ-VVSGSSDGTIKVWNLGQQRCIQTIHVHKEGVWSLLMSENFQYIISGSRDRNIIVTEIRNPSNK 285
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR12_DANRE (Ribosome biogenesis protein wdr12 OS=Danio rerio GN=wdr12 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 62/223 (27.80%), Postives = 90/223 (40.36%), Query Frame = 2 Query: 155 GPNGKQRTSSLESPIML---------------LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKN------------------------FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA----IQTFPDKYQITAVSFSDASE-*IYTGGIDNDVKVWDLR 691 G N T+SL+ +ML GH +V T+ V+P T SGS D+ + +W + M L GH A+ + W D ++ SAS D T+R WD ETG Q K S V +C + SGS D +LWD R + + +TAV ++ + E + +G +DN VK+WD R Sbjct: 153 GLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSVDTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLTRTPLMTLSGHNEAVSSVLWM-DADELCSASWDHTIRLWDAETGGQ--KSTLSGSKVFNCISYSPLCRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLWDTR 372
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TB1RB_XENLA (F-box-like/WD repeat-containing protein TBL1XR1-B OS=Xenopus laevis GN=tbl1xr1-B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 52/179 (29.05%), Postives = 80/179 (44.69%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGS---------QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRK 694 + PI GH + V +K +P G ++AS S D + +W + H C + L+ H I + W+ G + SAS D T+R WDV+ G I + +H V S S G L SGS D +W+ + + ++ I V ++ A + + D V V DLRK Sbjct: 347 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKHDTCVH--DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 522
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TB1RA_XENLA (F-box-like/WD repeat-containing protein TBL1XR1-A OS=Xenopus laevis GN=tbl1xr1-A PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 52/179 (29.05%), Postives = 80/179 (44.69%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGS---------QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRK 694 + PI GH + V +K +P G ++AS S D + +W + H C + L+ H I + W+ G + SAS D T+R WDV+ G I + +H V S S G L SGS D +W+ + + ++ I V ++ A + + D V V DLRK Sbjct: 344 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKHDTCVH--DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 519
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: SMU1_XENTR (WD40 repeat-containing protein SMU1 OS=Xenopus tropicalis GN=smu1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = 2 Query: 224 AVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF 592 AV M + ++A+G+ D I +W + G C + H + L ++ D SQI+SAS D+T+R +++GK +K+ H+SFVN ++ G ++S S DGT K+W+M+ TF Sbjct: 266 AVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFE-RAHSKGVTCLSFSKDCSQILSASFDQTIRVHGLKSGKTLKEFRGHSSFVNEATFTQDG-HYIISASSDGTVKIWNMKTTECSNTF 387
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: GBLP_RAT (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Rattus norvegicus GN=Gnb2l1 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 54/170 (31.76%), Postives = 81/170 (47.65%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ--RGAIQTFPDKYQITAVSFS--DASE*IYTGGIDNDVKVWDL 688 L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+ ++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T KLW+ + +Q ++ V FS ++ I + G D VKVW+L Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |