FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_MOUSE (U3 small nucleolar RNA-associated protein 15 homolog OS=Mus musculus GN=Utp15 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 44/170 (25.88%), Postives = 79/170 (46.47%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + P+ + + Y G ++ +GS D + L+ ++G +GH A+ + +T D ++S + D T++ WD+ K+I EH+ +V C S+ P L V+GS D T K++D R + + +V + + + G VKVWD+ KG Sbjct: 70 QEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDINGRAP-LRQFEGHTKAVHTVDFTADNYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKG 237
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 48/187 (25.67%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQ--------------------IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691 + TGH+ V ++ N GT+IAS S+D+ + +W V +CK L+ H++ + + W + S ++S S DKT++ WD+ G + + H+++V G ++S +DD T ++WD + + ++T ++ +T++ F + + TG +D VKVW+ R Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--AELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRG-VQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 HSP 2 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 49/186 (26.34%), Postives = 89/186 (47.85%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---------DMRQRGAIQ---TFPDKYQITAVSFSDASE---------*IYTGGIDNDVKVWDLRKG 697 L GH +V + + +G ++AS S D I LW G +C + GH + + + +G I+SAS DKT++ W+V+TG +K H +V P++ G L+ S S+D T ++W ++R+ + ++ + + +S + SE + +G D +K+WD+ G Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIG 328
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 52/186 (27.96%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 155 GPNGKQRTSSLESPIM--LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 G G+ + +L P +LTGH++ + ++K +P+ +++ S S D I +W G+ + LKGH NA+ D+ + G+ + S S D T++ WD +T +K + H+ V SC ++S S D T K+W+ I+T + ++ S+ I + D +K W++ KGE Sbjct: 83 GGRGRGKEDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFER--TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNV-SCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGE 265 HSP 2 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 46/146 (31.51%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAS 637 L GH +AV + + G ++AS S D I LW DC L GH + + + +T G Q+IS+S DKT++ W+ TG IK + H +V S G + S S+D T K W++ + + T+ + + + ++FS A+ Sbjct: 144 LKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVK--TLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDG-SCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTAN 286
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1B_XENLA (Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-B PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 48/187 (25.67%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQ--------------------IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691 + TGH+ V ++ N GT+IAS S+D+ + +W V +CK L+ H++ + + W + S ++S S DKT++ WD+ G + + H+++V G ++S +DD T ++WD + + ++T ++ +T++ F + + TG +D VKVW+ R Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--AELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRG-VQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 HSP 2 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---------DMRQRGAIQ---TFPDKYQITAVSFSDASE---------*IYTGGIDNDVKVWDLRKG 697 L GH +V + + +G ++AS S D I LW G +C M GH + + + +G I+SAS DKT++ W+V+TG +K H +V P++ G L+ S S+D T ++W ++R+ + ++ + + +S + SE + +G D +K+WD+ G Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTM--HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIG 328
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 48/187 (25.67%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQ--------------------IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691 + TGH+ V ++ N GT+IAS S+D+ + +W V +CK L+ H++ + + W + S ++S S DKT++ WD+ G + + H+++V G ++S +DD T ++WD + + ++T ++ +T++ F + + TG +D VKVW+ R Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--AELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRG-VQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 HSP 2 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 49/186 (26.34%), Postives = 89/186 (47.85%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---------DMRQRGAIQ---TFPDKYQITAVSFSDASE---------*IYTGGIDNDVKVWDLRKG 697 L GH +V + + +G ++AS S D I LW G +C + GH + + + +G I+SAS DKT++ W+V+TG +K H +V P++ G L+ S S+D T ++W ++R+ + ++ + + +S + SE + +G D +K+WD+ G Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIG 328
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_HUMAN (U3 small nucleolar RNA-associated protein 15 homolog OS=Homo sapiens GN=UTP15 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 44/170 (25.88%), Postives = 79/170 (46.47%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + PI + + Y G ++ +GS D + L+ + G +GH A+ + T D ++S + D T++ WD+ K+I EH+ +V C S+ P L ++GS D T K++D R ++ + + +V + + + G VKVWD+ KG Sbjct: 70 QEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTVDSTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKG 237
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 47/168 (27.98%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L GH V+T +++ G I SGS DR + +W D L+GH + + + + +++ S D TLR WD+ETG ++ + H + V C G +VVSG D T K+WD ++T ++ ++ + + +G +D ++VWD + E + Sbjct: 294 LNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAE-DGFLLHTLQGHTSTVRCM--AMANTTLVTGSRDCTLRVWDIETGLHVRTLQGHQAAVR--CVQFDG-NIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQ 455
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 51/179 (28.49%), Postives = 81/179 (45.25%), Query Frame = 2 Query: 176 TSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVN--SCCPSRRGPP--LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 TSSLE GH AV ++ +P G +ASGS D + W + + +F KGH++ +L + W+ DG ++ S + + WD TGKQ+ + +A H+ ++ S P P V S S DG+ ++WD + Q +Y+ D +KVW G Sbjct: 107 TSSLE-------GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 2 Query: 263 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVW 682 + SGS D +FLW D K + GH+ I + ++ D + SAS DK+++ WD TGK + + H + V S L+VSGS D T K+WD++ + P ++ AV +S + + +GG D +++W Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 51/179 (28.49%), Postives = 81/179 (45.25%), Query Frame = 2 Query: 176 TSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVN--SCCPSRRGPP--LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 TSSLE GH AV ++ +P G +ASGS D + W + + +F KGH++ +L + W+ DG ++ S + + WD TGKQ+ + +A H+ ++ S P P V S S DG+ ++WD + Q +Y+ D +KVW G Sbjct: 107 TSSLE-------GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 2 Query: 263 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVW 682 + SGS D +FLW D K + GH+ I + ++ D + SAS DK+++ WD TGK + + H + V S L+VSGS D T K+WD++ + P ++ AV +S + + +GG D +++W Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 L GH+ +V + V+P IA+ S D I +W +C F GH I + W T + SAS DKT+R WD E ++ + H ++V+S + G L+VSGS D T ++W+++ ++ P + I +VS S T D ++WD+ G+ Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLF----GHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQ 213 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |