FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_RAT (U3 small nucleolar RNA-associated protein 15 homolog OS=Rattus norvegicus GN=Utp15 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 44/170 (25.88%), Postives = 78/170 (45.88%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + P+ + + Y G ++ +GS D + L+ + G +GH A+ + +T D ++S + D T++ WD+ K+I EH+ +V C S+ P L V+GS D T K++D R + + +V + + + G VKVWD+ KG Sbjct: 70 QEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAP-LRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKG 237
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_BOVIN (U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus GN=UTP15 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 44/170 (25.88%), Postives = 79/170 (46.47%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + PI + + Y G ++ +GS D + L+ + G +GH A+ + +T D ++S + D T++ WD+ K+I EH+ +V C S+ L V+GS D T K++D R ++ + + +V + + + G VKVWD+ KG Sbjct: 70 QEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHSVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDARTNQSVISVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKG 237
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 49/179 (27.37%), Postives = 81/179 (45.25%), Query Frame = 2 Query: 176 TSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPP--LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 TSSLE GH AV ++ +P G +ASGS D + W + + +F +GH++ +L + W+ DG ++ S + + WD TGKQ+ + + H+ ++ + P P V S S DG+ ++WD +T Q +Y+ D +KVW G Sbjct: 107 TSSLE-------GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 2 Query: 263 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVW 682 + SGS D +FLW D K + GH+ I + ++ D I SAS DK+++ WD TGK + + H + V S L+VSGS D T K+WD++ + P ++ AV +S + + +GG D +++W Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483 HSP 3 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 40/124 (32.26%), Postives = 60/124 (48.39%), Query Frame = 2 Query: 188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 559 + P+ +TGHQ+ + + +P VIAS S D+ I LW K L+GH A+ + W+ D ++S S D TL+ WDV+ K + H V + S G V SG D ++W Sbjct: 362 KKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTG-KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDG-QRVASGGKDKCLRIW 483
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: GBLP_YEAST (Guanine nucleotide-binding protein subunit beta-like protein OS=Saccharomyces cerevisiae GN=ASC1 PE=1 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 53/174 (30.46%), Postives = 83/174 (47.70%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAG-TVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAV------SFSDASE*IYTGGIDNDVKVWDLRK 694 L GH V ++ + ++ S S D+ + W + GD + F V KGH + + D T DG+ +SAS DKTLR WDV TG+ ++ H S V S ++ +++SGS D T K+W ++ + ++ V D S I + G D VK W+L + Sbjct: 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: APAF_RAT (Apoptotic protease-activating factor 1 OS=Rattus norvegicus GN=Apaf1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 50/171 (29.24%), Postives = 84/171 (49.12%), Query Frame = 2 Query: 200 MLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC-CPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 +++ H AVY + G IAS D+ + ++ K + +K H++ +L +++D S I + S DK ++ WD TGK + EH+ VN C ++ L+ +GS+D KLWD+ Q+ T F +T FS E + + D +K+WD+R K Sbjct: 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-LLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEK 778
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_PONAB (WD repeat-containing protein 48 OS=Pongo abelii GN=WDR48 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ I+S S +K LR WD T ++ K+ H V + +R G +SGS DGT +LW + Q+ I T+ + + A+ +DA +Y+GG D + DLR Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLR 282
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_MACFA (WD repeat-containing protein 48 OS=Macaca fascicularis GN=WDR48 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ I+S S +K LR WD T ++ K+ H V + +R G +SGS DGT +LW + Q+ I T+ + + A+ +DA +Y+GG D + DLR Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLR 282
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_HUMAN (WD repeat-containing protein 48 OS=Homo sapiens GN=WDR48 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ I+S S +K LR WD T ++ K+ H V + +R G +SGS DGT +LW + Q+ I T+ + + A+ +DA +Y+GG D + DLR Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLR 282
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_BOVIN (WD repeat-containing protein 48 OS=Bos taurus GN=WDR48 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ I+S S +K LR WD T ++ K+ H V + +R G +SGS DGT +LW + Q+ I T+ + + A+ +DA +Y+GG D + DLR Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLR 282
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NUDF_USTMA (Nuclear distribution protein PAC1 OS=Ustilago maydis GN=PAC1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 55/191 (28.80%), Postives = 83/191 (43.46%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-------RG-----AIQTFPDKYQITAV--------------SFSDASE*IYTGGIDNDVKVWDLRKGE 700 L GH AV + + G + S S D I +W + D KN L+GH +++ + + I+SAS DKT++ W+ TG K + H +V S PS L VS S D TA++WD+ RG + F A+ S S A + + TG D +++WD G+ Sbjct: 160 LKGHTKAVQDVDFDSKGNYVLSCSSDLSIKVWDANNDYKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAIPSDDAKWL-VSCSTDQTARVWDVSSGETKVELRGHEHVVEVAIFAPVASYAAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDSISGQ 349 HSP 2 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 63/234 (26.92%), Postives = 108/234 (46.15%), Query Frame = 2 Query: 14 RAHLSSIVPEGNMEVVTHQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG-KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 RA + ++ + V+ Q++ S +S E S P SA ++ N +S S + GH+ V + +P + IAS S D + LW GD + LKGH A+ D+ + + G+ ++S S D +++ WD K IK + H+ V+S G +VS S D T K+W+ +T + + + SD ++ + + D +VWD+ GE+K Sbjct: 57 RAKYAGLLEKKWTSVIRLQKKIMEMESRISQLQEELSAAP-SAKRSASLNDWLPAAS--SARHTMQGHRLPVTKVSFHPVFSQIASASEDTTVKLWDWETGDFER--TLKGHTKAVQDVDFDSKGNYVLSCSSDLSIKVWDANNDYKNIKTLQGHDHSVSS-VRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETK 284 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |