FC929861

Overview
NameFC929861
Unique NameFC929861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25
Identity = 55/79 (69.62%), Postives = 63/79 (79.75%), Query Frame = 1
Query:  469 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            LP  VDWR KGAV  +K+Q  CGSCWAFS +AAVE INKI TG LISLSEQELVDCDT+ + GCNGG M+ AF++II N
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITN 78          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24
Identity = 75/174 (43.10%), Postives = 99/174 (56.90%), Query Frame = 1
Query:  187 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKV-GLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 699
            DE    F+   +K+ K Y+   E E RF IFK N+     +    R   + G+  ++DLT +E+   HL A +      + S RSN    L +    +P + DWR+KGAV EVK+QG CGSCWAFST   VE      TG L+SLSEQ+LVDCD   ++GCNGGL   A+E II
Sbjct:   17 DEKYVQFK---LKYRKQYHET-EDEIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTASW-----VVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESII 180          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 62/165 (37.58%), Postives = 93/165 (56.36%), Query Frame = 1
Query:  205 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 699
            FE +L  + K YN   EKE+RF IF++ L  I+  N  N +    +N+FADL+  E  S + G     + T+          P  G   P + DWR++  V  +K+Q +CG+CWAF+T+A++E    I     I LSEQ+++DCD   + GC+GGL+  AFE +I
Sbjct:   31 FETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKG---PLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCD-YVDMGCDGGLLHTAFEQMI 191          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 63/173 (36.42%), Postives = 98/173 (56.65%), Query Frame = 1
Query:  202 MFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDE--HNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDN 705
            ++  W +K+ + Y    ++  R+++F +NL +I     + E  T+ + LN+FAD++ +E+   +L  +    RT+  +  ++ +  +  E     VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y N+GCNGG MD AFE++ DN
Sbjct:   25 LYANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLK--VPRTAKLNAANSNFQYKGAE-----VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADN 190          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 65/179 (36.31%), Postives = 97/179 (54.19%), Query Frame = 1
Query:  184 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDN 705
            D ++ A ++ W  K+ K+Y+   E  +R  +++EN+R I  HN EN      + + +N+F D T+EE+R         A  T   ++        V   LPD  DWR++G V  V++QG CGSCWAF+   A+EG     TG+L  LS Q L+DC  T  N+GC  G    AFE+++ N
Sbjct:   22 DPKLDAEWKDWKTKYAKSYSPKEEALRR-AVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQN------HVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKN 193          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 64/170 (37.65%), Postives = 99/170 (58.24%), Query Frame = 1
Query:  190 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 696
            ++ ++F+ +++ + + Y +  E   R  +F  N+    +  + +R T + G+ +F+DLT EE+R+++L      K    K K++      VG+  P   DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I
Sbjct:  182 KMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLL-RKEPGNKMKQAKS----VGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAI 345          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 68/188 (36.17%), Postives = 98/188 (52.13%), Query Frame = 1
Query:  157 ESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDN 705
            E  S++   D  +   +  W  KHGKAYN + E+  R  ++++N + I+ HN E       + + +N F DLTN E+  M  G R        K KR + +       +P  VDWR  G V  VK+QG C S WAFS   ++EG     TG L+ LSEQ L+DC  ++    C+GG M  AF+++ DN
Sbjct:   13 EIDSTAPTLDPSLDVQWNEWRTKHGKAYN-VNEERLRRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFR------RQKIKRMHVFQDHQFLYVPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDN 193          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 65/170 (38.24%), Postives = 97/170 (57.06%), Query Frame = 1
Query:  205 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR----YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 702
            FE +L K  K+Y++  EK +RF+IF+ NL  I   N  + T +  +N+FADL+ +E  S + G        SL  +  N      L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I     I+LSEQ+L+DCD   + GC+GGL+  AFE +++
Sbjct:   28 FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGL-------SLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCD-FVDAGCDGGLLHTAFEAVMN 189          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 66/177 (37.29%), Postives = 96/177 (54.24%), Query Frame = 1
Query:  205 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTS--LKSKRSNRYLPRVG---EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDN 705
            ++ W +K+ K Y+   E  KR  +++EN++ I+ HN EN     TY + +N FAD+T+EE++ M +G +     T   L  +    + P      +ALP  VDWR +G V  V+ QG C SCWAF    A+EG     TG LI LS Q L+DC     N GC  G    AF++++ N
Sbjct:   29 WQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHN 204          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 68/181 (37.57%), Postives = 96/181 (53.04%), Query Frame = 1
Query:  184 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPR--VGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDN 705
            D  + A ++ W +K+ K+Y+   EK KR  +++E L+ I  HN EN   K G    +N F D T+EE+R M +         S+ + R  + + +   G  LP  VDWRKKG V  V+ QG C +CWAF+   A+E      TG L  LS Q LVDC     N GC GG    AF++++ N
Sbjct:   22 DSSLDAEWQDWKIKYNKSYSLKEEKLKRV-VWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMI-------EISVWTHREGKSIMKREAGSILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHN 194          
The following BLAST results are available for this feature:
BLAST of FC929861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ERVB_TABDI4.690e-2569.62Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATL_SCHMA1.045e-2443.10Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATV_NPVBS1.782e-2437.58Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATL1_PARTE1.782e-2436.42Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATJ_MOUSE1.782e-2436.31Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATF_HUMAN1.782e-2437.65Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
TEST2_MOUSE3.040e-2436.17Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATV_NPVCF3.040e-2438.24Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATQ_RAT3.040e-2437.29Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATR_MOUSE5.186e-2437.57Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34001C01EF PostHarvC1 Citrus clementina cDNA clone C34001C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929861 ID=FC929861; Name=FC929861; organism=Citrus clementina; type=EST; length=705bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGTTCTTTTCTCA
AAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGC
TATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAAT
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