FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.848e-42
Identity = 83/91 (91.21%), Postives = 88/91 (96.70%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            MAL V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS+
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 91          

HSP 2 Score: 166.777 bits (421), Expect = 9.803e-41
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LIVDDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+VLTII++ LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDS
Sbjct:  135 LIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTIIKESLKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDS 232          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            MAL V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA RAEFGPSQP KGAKIT SLHMTIQTA LIETLTALGAEVRWCSCNIFS+
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRAEFGPSQPVKGAKITCSLHMTIQTAFLIETLTALGAEVRWCSCNIFST 91          

HSP 2 Score: 153.68 bits (387), Expect = 8.588e-37
Identity = 76/98 (77.55%), Postives = 84/98 (85.71%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LIVDDGGDATLLIHEGVKAEE + K G +PDP STDN EFQ+VLTII++ LK DP +Y KMKERLVGVSEETTTGVK+LYQM  NG+LLF  INVNDS
Sbjct:  135 LIVDDGGDATLLIHEGVKAEEEFAKNGTVPDPTSTDNVEFQLVLTIIKESLKTDPLRYTKMKERLVGVSEETTTGVKKLYQMPANGSLLFLPINVNDS 232          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSEMY (Adenosylhomocysteinase OS=Pseudomonas mendocina (strain ymp) GN=ahcY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.885e-34
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V   A   ++KV D+S AD+GR E+ +AE EMP LM  R ++  SQP KGAKI G +HMTIQT VLIETLTALGAEVRW SCNIFS+
Sbjct:    3 AVLTPAGFTDYKVADISLADWGRKELIIAESEMPALMGLRRKYAASQPLKGAKILGCIHMTIQTGVLIETLTALGAEVRWSSCNIFST 90          

HSP 2 Score: 55.8398 bits (133), Expect = 3.885e-34
Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADP---------------KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                KKY +M ER+ G++EETTTGV RL  M + GTL  PAINVND+
Sbjct:  117 EWCIEQTILKDGKPWDANMVLDDGGDLTEILHKKYPQMLERIHGITEETTTGVHRLLDMLKAGTLKVPAINVNDA 191          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSEE4 (Adenosylhomocysteinase OS=Pseudomonas entomophila (strain L48) GN=ahcY PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.216e-33
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V   A   +FKV D+S AD+GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    3 AVNTPAGFSDFKVADISLADWGRKEVIIAESEMPALMGLRRKYQAEQPLKGAKIIGCIHMTIQTAVLIETLVALGAEVRWSSCNIFST 90          

HSP 2 Score: 53.1434 bits (126), Expect = 3.216e-33
Identity = 34/75 (45.33%), Postives = 40/75 (53.33%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADP---------------KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                KKY  M E++ GV+EETTTGV RL  M   G L  PAINVNDS
Sbjct:  117 EWCIEQTILKDGQPWDANMVLDDGGDLTEILHKKYPAMLEKIHGVTEETTTGVHRLLDMLAKGELKVPAINVNDS 191          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAE (Adenosylhomocysteinase OS=Pseudomonas aeruginosa GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.216e-33
Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V   A   ++KV D++ A +GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFS+
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFST 90          

HSP 2 Score: 60.077 bits (144), Expect = 3.216e-33
Identity = 36/75 (48.00%), Postives = 44/75 (58.67%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADP---------------KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                KKY +M ER+ G++EETTTGV RL  M +NGTL  PAINVNDS
Sbjct:  117 EWCIEQTILKDGQPWDANMVLDDGGDLTEILHKKYPQMLERIHGITEETTTGVHRLLDMLKNGTLKVPAINVNDS 191          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAB (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.216e-33
Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V   A   ++KV D++ A +GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFS+
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFST 90          

HSP 2 Score: 60.077 bits (144), Expect = 3.216e-33
Identity = 36/75 (48.00%), Postives = 44/75 (58.67%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADP---------------KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                KKY +M ER+ G++EETTTGV RL  M +NGTL  PAINVNDS
Sbjct:  117 EWCIEQTILKDGQPWDANMVLDDGGDLTEILHKKYPQMLERIHGITEETTTGVHRLLDMLKNGTLKVPAINVNDS 191          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.216e-33
Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V   A   ++KV D++ A +GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFS+
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFST 90          

HSP 2 Score: 60.077 bits (144), Expect = 3.216e-33
Identity = 36/75 (48.00%), Postives = 44/75 (58.67%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADP---------------KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                KKY +M ER+ G++EETTTGV RL  M +NGTL  PAINVNDS
Sbjct:  117 EWCIEQTILKDGQPWDANMVLDDGGDLTEILHKKYPQMLERIHGITEETTTGVHRLLDMLKNGTLKVPAINVNDS 191          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU5 (Adenosylhomocysteinase OS=Pseudomonas stutzeri (strain A1501) GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.252e-33
Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V   A   +FKV D+S A +GR EI +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    3 AVMTPAGFTDFKVADISLAAWGRREIIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLIALGAEVRWSSCNIFST 90          

HSP 2 Score: 53.9138 bits (128), Expect = 9.252e-33
Identity = 33/75 (44.00%), Postives = 42/75 (56.00%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADPK---------------KYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                 KY ++ ER+ G++EETTTGV RL  M + GTL  PAINVNDS
Sbjct:  117 EWCIEQTILKDGQPWDANMVLDDGGDLTQILHDKYPQVLERVHGITEETTTGVHRLLDMLKGGTLKVPAINVNDS 191          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU2 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.690e-31
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V   A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    3 AVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFST 90          

HSP 2 Score: 52.373 bits (124), Expect = 1.690e-31
Identity = 33/75 (44.00%), Postives = 40/75 (53.33%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADP---------------KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                KKY  M +++ GV+EETTTGV RL  M   G L  PAINVNDS
Sbjct:  117 EWCIEQTILKDGQPWDANMILDDGGDLTEIIHKKYPAMLDKIHGVTEETTTGVHRLLDMLAKGELKIPAINVNDS 191          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PSESM (Adenosylhomocysteinase OS=Pseudomonas syringae pv. tomato GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.866e-31
Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFST 90          

HSP 2 Score: 52.373 bits (124), Expect = 2.866e-31
Identity = 33/75 (44.00%), Postives = 40/75 (53.33%), Query Frame = 3
Query:  507 EFQIVLTIIRDGLKADP---------------KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            E+ I  TI++DG   D                KKY  M +++ GV+EETTTGV RL  M   G L  PAINVNDS
Sbjct:  117 EWCIEQTILKDGQPWDANMILDDGGDLTEIIHKKYPAMLDKIHGVTEETTTGVHRLLDMLAKGELKIPAINVNDS 191          
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_NICSY6.848e-4291.21Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_SOLLC9.256e-3987.91Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]
SAHH_PSEMY3.885e-3462.50Adenosylhomocysteinase OS=Pseudomonas mendocina (s... [more]
SAHH_PSEE43.216e-3362.50Adenosylhomocysteinase OS=Pseudomonas entomophila ... [more]
SAHH_PSEAE3.216e-3357.95Adenosylhomocysteinase OS=Pseudomonas aeruginosa G... [more]
SAHH_PSEAB3.216e-3357.95Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEA83.216e-3357.95Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEU59.252e-3362.50Adenosylhomocysteinase OS=Pseudomonas stutzeri (st... [more]
SAHH_PSEU21.690e-3160.23Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSESM2.866e-3162.65Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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