FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            K+    ++ V DLS A +GR EI +AE EMPGLMA R EF   QP KGA++TGSLHMTIQTAVL+ETL ALGA+VRW SCNIFS+
Sbjct:    6 KALHENDYLVADLSLAAWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARVTGSLHMTIQTAVLVETLQALGAQVRWASCNIFST 90          

HSP 2 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L +P S +      +   IR  L  DP  Y +   +++GV+EETTTGV RL +M   GTLLF AINVNDS
Sbjct:  138 MILDDGGDATLLMHLGKRAEK---DLSLLDNPKSEEET---CLYAAIRAKLAVDPTWYSRKGAQIIGVTEETTTGVHRLKEMSAAGTLLFRAINVNDS 229          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_BART1 (Adenosylhomocysteinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 53/82 (64.63%), Postives = 68/82 (82.93%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            + ++F VKD+  A +GR E+++AE EMPGLMACR EF  SQP +GA+I+GSLHMTIQTAVLIETL A+GA++RW S NIFS+
Sbjct:    2 TAQDFVVKDIGLAAYGRKELDIAETEMPGLMACRKEFSSSQPLRGARISGSLHMTIQTAVLIETLKAIGADIRWSSSNIFST 83          

HSP 2 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDG DAT  I  G +AE+       L  P + +    +I    I+  + A P  + + +  + GVSEETTTGV RLYQ+Q+ G L FPAINVNDS
Sbjct:  127 MILDDGADATNYILVGSRAEQ---NKDILSHPKTEEE---EIFFKQIQKRMDATPGFFTRQRAAIKGVSEETTTGVNRLYQLQKEGLLPFPAINVNDS 218          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 1
Query:  124 AMALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            A A +  +    +++ + D+  ADFGR E+ +AE EMPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFS+
Sbjct:    3 ATAAATAELQVAKDYVIADIGLADFGRKELNIAETEMPGLMALRAKYGKDKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFST 94          

HSP 2 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT L+  G KAE+       L +P+   N E   +   I+  L  D   Y ++K  + GV+EETTTGV RLY+MQ++G L FPAINVNDS
Sbjct:  138 MILDDGGDATGLVMLGSKAEQ---DITVLDNPS---NEEETFLFASIKKKLAKDSSFYSRIKAEIQGVTEETTTGVARLYKMQKSGELPFPAINVNDS 229          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ V D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFST 88          

HSP 2 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G KAE+      K   P S +      +   I++ L  D   Y +  + + GV+EETTTGV RLYQM + G L FPAINVNDS
Sbjct:  132 MILDDGGDATLLLHLGAKAEQDASVIAK---PGSEEET---FLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDS 223          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ V D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFST 88          

HSP 2 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G KAE+       L  P S +      +   I++ L  D   Y +  + + GV+EETTTGV RLYQM + G L FPAINVNDS
Sbjct:  132 MILDDGGDATLLLHLGAKAEK---DVSVLAHPGSEEET---FLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDS 223          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_YEAST (Adenosylhomocysteinase OS=Saccharomyces cerevisiae GN=SAH1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            SA  + +K+ D+S A FGR EIELAE EMPGLMA R  +G  QP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNI+S+
Sbjct:    2 SAPAQNYKIADISLAAFGRKEIELAEHEMPGLMAIRKAYGDVQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYST 85          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +KVKD+  A++GR EIELAE EMPGLMA R E+G S+P KGA+I G LHMTIQTAVLIETL  LGA V W SCNIFS+
Sbjct:   11 YKVKDIELAEYGRREIELAEAEMPGLMALRKEYGASKPLKGARIAGCLHMTIQTAVLIETLVELGANVTWSSCNIFST 88          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_FLAPJ (Adenosylhomocysteinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            FKVKD+S A +GR EIELAE EMPGLMA RAE+   QP  GA+I G LHMTIQTAVLIETL ALGAEV W SCNIFS+
Sbjct:   11 FKVKDISLAAWGRKEIELAEAEMPGLMALRAEYKNEQPLAGARIAGCLHMTIQTAVLIETLIALGAEVTWSSCNIFST 88          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            + D+S A++GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:   13 IADISLAEWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFST 88          

HSP 2 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L +P S +    +I+   I+  L  D   Y +   +++GV+EETTTGV RL +M   GTL+F AINVNDS
Sbjct:  136 MILDDGGDATLLMHLGKRAEK---DASVLANPGSEEE---RILFAAIKAKLAEDSTWYSRKSAQIIGVTEETTTGVHRLKEMSAKGTLMFRAINVNDS 227          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_BURPP (Adenosylhomocysteinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            M  +V  S + ++F V D+S AD+GR E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETLTALGA+VRW SCNIFS+
Sbjct:    1 MNAAVIDSKNSQDFVVADMSLADWGRKELNIAETEMPGLVQTREEYKAQQPLKGARIAGSLHMTIQTGVLIETLTALGADVRWASCNIFST 91          

HSP 2 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 48/98 (48.98%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+  G KAE+      K        N E   +   I   L ADP  Y      + GV+EETTTGV RLYQM++ G L FPAINVNDS
Sbjct:  135 MILDDGGDATLLLILGSKAEKDRSVISK------PTNEEEVALYKSIASHLDADPTWYSTRLAHIQGVTEETTTGVHRLYQMEKEGRLPFPAINVNDS 226          
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_LEPCP4.459e-2565.88Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_BART14.459e-2564.63Adenosylhomocysteinase OS=Bartonella tribocorum (s... [more]
SAHH_SYNS35.824e-2558.70Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RALSO5.824e-2570.89Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_RALPJ5.824e-2570.89Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_YEAST7.607e-2567.86Adenosylhomocysteinase OS=Saccharomyces cerevisiae... [more]
SAHH_GRAFK7.607e-2570.51Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_FLAPJ7.607e-2574.36Adenosylhomocysteinase OS=Flavobacterium psychroph... [more]
SAHH_DIAST7.607e-2572.37Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_BURPP7.607e-2561.54Adenosylhomocysteinase OS=Burkholderia phytofirman... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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