FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RALEJ (Adenosylhomocysteinase OS=Ralstonia eutropha (strain JMP134) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ V D+S A +GR EI +AE EMPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:    9 QDYLVADISLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFST 88          

HSP 2 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G KAE+       + +P S +      +   I++ L  DP  Y +    + GV+EETTTGV RLYQM + G L FPAINVNDS
Sbjct:  132 MILDDGGDATLLLHLGAKAEK---DASLIANPGSEEET---FLFAAIKEKLAKDPSWYSRNLAAIRGVTEETTTGVHRLYQMAQKGDLKFPAINVNDS 223          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24
Identity = 54/76 (71.05%), Postives = 63/76 (82.89%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            + D+S +DFGR EI +AE EMPGL+A R EF   QP +GA+ITGSLHMTIQTAVLIETL ALGAEV+W SCNIFS+
Sbjct:   17 IADISLSDFGRKEIAIAETEMPGLIAIRDEFAAQQPLRGARITGSLHMTIQTAVLIETLEALGAEVQWASCNIFST 92          

HSP 2 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L +P S +     I+   I+  L  DP  Y    E++ GV+EETTTGV RLYQM   G L FPAINVNDS
Sbjct:  136 MILDDGGDATLLLHLGARAEK---DQACLNNPTSEEET---ILFAAIKKKLAQDPTWYSTRLEKVKGVTEETTTGVHRLYQMFAKGELKFPAINVNDS 227          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PLAYO (Adenosylhomocysteinase OS=Plasmodium yoelii yoelii GN=PY02893 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 1
Query:  169 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            K+KDLS A FG+L++E++E EMPG+M  R E+   +PFKGAKITG LHMTI+TA+LIETL  LGA +RWCSCNIFS+
Sbjct:    7 KIKDLSLAPFGKLQMEISETEMPGIMTIREEYEKLKPFKGAKITGCLHMTIETALLIETLQKLGARIRWCSCNIFST 83          

HSP 2 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 48/98 (48.98%), Postives = 72/98 (73.47%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LIVDDG DA+ L+H+G + E++YE+   LPDP S  N E +  L++I+  +  +PKK+  M ++++G+SEETTTGV R+ ++++N  LLF AINVNDS
Sbjct:  129 LIVDDGADASYLVHKGAEYEKLYEEKKILPDPESGKNEEERCFLSLIKSSILKNPKKWTNMAKKIIGMSEETTTGVLRVKKIEKNNGLLFTAINVNDS 226          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_BARQU (Adenosylhomocysteinase OS=Bartonella quintana GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24
Identity = 53/82 (64.63%), Postives = 69/82 (84.15%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            + +++ VKD++ A +GR EI++AE EMPGLMACR EF  SQP +GA+I+GSLH+TIQTAVLIETL A+GA+VRW S NIFS+
Sbjct:    2 AAQDYVVKDIALAAYGRKEIDIAETEMPGLMACREEFSFSQPLRGARISGSLHITIQTAVLIETLKAIGADVRWSSSNIFST 83          

HSP 2 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 45/103 (43.69%), Postives = 56/103 (54.37%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEE-----IYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LI+DDG DAT  I  G +AE       Y KT            E +     I+  +K  P  + + +  + GVSEETTTGV RLYQ+Q+ G L FPAINVNDS
Sbjct:  127 LILDDGADATNYILTGSRAEVNKDILSYPKT-----------KEEEFFFKQIQKRMKITPGFFTRQRTAIKGVSEETTTGVLRLYQLQKEGLLPFPAINVNDS 218          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_POLNS (Adenosylhomocysteinase OS=Polynucleobacter necessarius (strain STIR1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            + D+S ADFGR EI +AE EMPGL+A R EF   QP +G +ITGSLHMTIQTAVLIETL ALGAEV+W SCNIFS+
Sbjct:   17 IADISLADFGRKEIAIAETEMPGLIAIRDEFAAQQPLRGTRITGSLHMTIQTAVLIETLEALGAEVQWASCNIFST 92          

HSP 2 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L  P S +     I+   I++ L  DP  Y    E++ GV+EETTTGV RLYQM   G L FPAINVNDS
Sbjct:  136 MILDDGGDATLLLHLGARAEK---DQACLNHPTSEEET---ILFAAIKNKLAQDPTWYSTRLEKVKGVTEETTTGVHRLYQMFARGDLKFPAINVNDS 227          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +F V D++ A +GR E+ +AE EMPGLMA R E+  +QP +GA+I GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:    6 DFHVADIALAGWGRKELNIAETEMPGLMATRDEYHAAQPLRGARIAGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 84          

HSP 2 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 49/98 (50.00%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+  G KAE+     G +  P    N E   +   I+  L  DP  Y K  E + GV+EETTTGV RLYQ++++G L FPAINVNDS
Sbjct:  128 MILDDGGDATLLLMLGSKAEK---DIGVIAHPT---NEEETALFASIKRHLAIDPHWYSKRLEHIQGVTEETTTGVHRLYQLEKDGHLPFPAINVNDS 219          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_ANOGA (Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahcy13 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24
Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +KV D+S A+FGR EI LAE EMPGLMACR ++GP +  KGA+I G LHMTIQTAVLIETL  LGAEV+W SCNIFS+
Sbjct:    6 YKVADISLAEFGRKEIVLAENEMPGLMACRQKYGPLKILKGARIAGCLHMTIQTAVLIETLIELGAEVQWSSCNIFST 83          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PNECA (Adenosylhomocysteinase (Fragment) OS=Pneumocystis carinii GN=SAHH PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.625e-24
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 1
Query:  190 ADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            A++GR EIELAE EMPGL++CR      +P +  +I G LHMTIQTAVLIETL  LGAEV W SCNIFS+
Sbjct:    7 AEWGRKEIELAENEMPGLISCRRNMR-FKPLR-VQIAGCLHMTIQTAVLIETLVELGAEVTWSSCNIFST 74          

HSP 2 Score: 48.9062 bits (115), Expect = 3.625e-24
Identity = 34/102 (33.33%), Postives = 43/102 (42.16%), Query Frame = 3
Query:  384 QHL-LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +HL +I+DDGGD T L+H                                          KY    +   G+SEETTTGV + Y+M + G L  PAINVNDS
Sbjct:  115 KHLNMILDDGGDVTSLVH-----------------------------------------NKYPDYLKNCKGISEETTTGVHQFYKMLKEGKLKVPAINVNDS 175          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            M ++     S  +F + D+S +DFGR EI++AE EMPGLMA R ++   +P KGAKI GSLHMTIQTAVLIETL  LGAEV+W SCNIFS+
Sbjct:    1 MVIANSVKTSTPKFIISDISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAEVKWASCNIFST 91          

HSP 2 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT L+  G KAE+       L +P+   N E   +   I+  LK D + Y ++K  ++GV+EETTTGV RLYQ+Q+   L FPAINVNDS
Sbjct:  134 MILDDGGDATGLLILGSKAEK---DLSVLDNPS---NEEEIALFNSIKSKLKNDGEFYSRIKSNIIGVTEETTTGVARLYQLQKQNALPFPAINVNDS 225          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 1
Query:  169 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            KV DLS AD+GR EI +AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:   18 KVADLSLADWGRKEIAIAETEMPGLMALREQYADKKPLAGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 94          

HSP 2 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 49/101 (48.51%), Postives = 62/101 (61.39%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDP---ASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+  G KAE          DP   A+  N E Q++   IR  L + P  Y +    + GV+EETTTGV RLY+M++ G L FPAINVNDS
Sbjct:  140 MILDDGGDATLLLILGSKAER---------DPSVIANPTNEEEQVLFASIRSRLASHPGWYSRNLAAIRGVTEETTTGVHRLYEMEKKGELPFPAINVNDS 231          
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_RALEJ2.213e-2468.75Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_POLSQ2.213e-2471.05Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]
SAHH_PLAYO2.213e-2466.23Adenosylhomocysteinase OS=Plasmodium yoelii yoelii... [more]
SAHH_BARQU2.213e-2464.63Adenosylhomocysteinase OS=Bartonella quintana GN=a... [more]
SAHH_POLNS2.891e-2471.05Adenosylhomocysteinase OS=Polynucleobacter necessa... [more]
SAHH_CHRVO2.891e-2467.09Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_ANOGA2.891e-2470.51Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahc... [more]
SAHH_PNECA3.625e-2464.29Adenosylhomocysteinase (Fragment) OS=Pneumocystis ... [more]
SAHH_PROM03.775e-2460.44Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_NITEU3.775e-2471.43Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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