FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_SPHAL (Adenosylhomocysteinase OS=Sphingopyxis alaskensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 1 
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +A  R++ V D+  ADFGR EI +AE EMPGLMA RAE+G SQP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW +CNIFS+
Sbjct:    5 AADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWATCNIFST 88

HSP 2 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LI+DDGGDAT+    G K E        +P P + +  E Q  L      + A P    K  + + GVSEETTTGV RLY + + G L FPAINVNDS
Sbjct:  135 LILDDGGDATMFALWGAKLEA----GETMPPPENEEEVEMQRALKAF---IAAKPGYLTKTVKAIKGVSEETTTGVHRLYHIAKKGELPFPAINVNDS 225
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.134e-28
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ VKD+  A+FGR E+++AE EMPGLMACR EFGPSQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:    3 DYIVKDIKLAEFGRKELDIAETEMPGLMACREEFGPSQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFST 81

HSP 2 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATL I  G + E    +T  +  P S D      +   I+  +   P  + + +  + GVSEETTTGV RLY + + G L FPAINVNDS
Sbjct:  124 MILDDGGDATLYILLGARVEA--GETDLIATPTSEDEV---CLFNQIKKRMVESPGWFTQQRAAIKGVSEETTTGVHRLYDLHKKGLLPFPAINVNDS 216
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_OCHA4 (Adenosylhomocysteinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.934e-28
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            + ++F VKDLS AD+GR E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    3 ASQDFVVKDLSLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLQALGAEVRWASCNIFST 84

HSP 2 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +    L +P S +    +++   I+  + A P  + + ++ + GV+EETTTGV RLYQ+Q+ G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILIGARAEAGEDV---LSNPGSEEE---EVLFAQIKKRMAATPGFFTRQRDAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDS 219
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_SINMW (Adenosylhomocysteinase OS=Sinorhizobium medicae (strain WSM419) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ +++ V D+  ADFGR EI +AE EMPGLMACR EFG S+P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    2 SANQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 84

HSP 2 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE        L +P S +    +I+   I+  L A P  + K ++ + GV+EETTTGV RLYQ+Q  G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILLGARAEA---GENILINPGSEEE---EILFAQIKKRLAATPGWFTKQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDS 219
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28
Identity = 59/80 (73.75%), Postives = 69/80 (86.25%), Query Frame = 1 
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ V D+  ADFGR EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRAEFGEAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 84

HSP 2 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +    L +P S +    +I+   I+  L A P  + K ++ + GV+EETTTGV RLYQ+ + G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILLGARAEAGEDV---LSNPHSEEE---EILFAQIKKRLAASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDS 219
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28
Identity = 59/80 (73.75%), Postives = 69/80 (86.25%), Query Frame = 1 
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ V D+  ADFGR EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRAEFGDAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 84

HSP 2 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +    L  P S +    +I+   I+  L A P  + K ++ + GV+EETTTGV RLYQ+ + G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILLGARAEAGEDV---LSHPHSEEE---EILFAQIKKRLAASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDS 219
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ V D+  ADFGR EI +AE EMPGLMACRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    6 DYIVADIGLADFGRKEITIAETEMPGLMACRAEFGETKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 84

HSP 2 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +    L DP S +    +I+   I+  LKA P  + K ++ + GV+EETTTGV RLYQ+ + G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILLGARAEAGEDV---LSDPHSEEE---EILFAQIKKRLKASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDS 219
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 1 
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ V D+  ADFGR EI +AE EMPGLMACR EFG S+P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    5 QDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 84

HSP 2 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE        L +P S +    +I+   I+  L A P  + + ++ + GV+EETTTGV RLYQ+Q  G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILLGARAEA---GENILTNPGSEEE---EILFAQIKKRLAATPGWFTRQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDS 219
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ VKD+S ADFGR EI +AE EMPGLMA RAE+GP Q  KGA+I GSLHMTIQTAVLIETLTALGAEVRW SCNIFS+
Sbjct:    3 DYIVKDISLADFGRKEIAIAETEMPGLMATRAEYGPQQILKGARIAGSLHMTIQTAVLIETLTALGAEVRWASCNIFST 81

HSP 2 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 47/101 (46.53%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPA---STDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LI+DDGGDATLL   G KAE+         DP+   +  N E + +  +++  L   P  Y  ++  + GVSEETTTGV RLYQM +   L FPAINVNDS
Sbjct:  125 LILDDGGDATLLCVLGPKAEK---------DPSILNNPQNEEEEALYAVMKKYLAEKPGFYSAIRAAIGGVSEETTTGVHRLYQMAQKDELPFPAINVNDS 216
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 1 
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ V D+  ADFGR EI +AE EMPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRTEFGQAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 84

HSP 2 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +    L  P S +    +I+   I+  L A P  + K ++ + GV+EETTTGV RLYQ+ + G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILLGARAEAGEDV---LSHPHSEEE---EILFAQIKKRLAASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDS 219
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_SPHAL6.648e-2973.81Adenosylhomocysteinase OS=Sphingopyxis alaskensis ... [more]
SAHH_RHOCA1.134e-2874.68Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]
SAHH_OCHA41.934e-2874.39Adenosylhomocysteinase OS=Ochrobactrum anthropi (s... [more]
SAHH_SINMW2.526e-2872.29Adenosylhomocysteinase OS=Sinorhizobium medicae (s... [more]
SAHH_RHIEC3.300e-2873.75Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_RHIE63.300e-2873.75Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_AGRRK3.300e-2875.95Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_RHIME4.309e-2875.00Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_CAUCR5.628e-2877.22Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_RHILW9.600e-2872.50Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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