FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METMP (Adenosylhomocysteinase OS=Methanococcus maripaludis GN=ahcY PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 8.240e-15
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            VKD+S A  G L++E A+  MP L     EF   +PF+G  I  +LH+  +TA+L ETL   GA++    CN  S+
Sbjct:    4 VKDMSLAPSGHLKMEWAKRHMPVLCRIAEEFKNDKPFEGLTIGMALHLEAKTAILAETLLEGGAKIVITGCNPLST 79          

HSP 2 Score: 45.8246 bits (107), Expect = 8.240e-15
Identity = 31/87 (35.63%), Postives = 41/87 (47.13%), Query Frame = 3
Query:  438 GVKAEEIYEKTGKL----PDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            G   EE YE   K+    PD    D A+   ++   R  L            +++G  EETTTG+ RL  M E G L FP +NVND+
Sbjct:   99 GETNEEYYENLNKVLDSNPDIIIDDGADLIFLIHTERTELIG----------KIMGGCEETTTGIIRLKSMAEEGALKFPVVNVNDA 175          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METJA (Adenosylhomocysteinase OS=Methanocaldococcus jannaschii GN=ahcY PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 8.690e-14
Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++V+D++    G  +I+ A+  MP L   R  F   +PFKG  I  +LH+  +TAVL ETL   GAE+    CN  S+
Sbjct:    2 YEVRDINLWKEGERKIQWAKQHMPVLNLIRERFKEEKPFKGITIGMALHLEAKTAVLAETLMEGGAEIAITGCNPLST 79          

HSP 2 Score: 43.5134 bits (101), Expect = 8.690e-14
Identity = 28/87 (32.18%), Postives = 42/87 (48.28%), Query Frame = 3
Query:  438 GVKAEEIYEKTGKL----PDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            G   EE YE   K+    PD    D  +   +L   R           ++ + ++G  EETTTG+ RL  M++ G L FP ++VND+
Sbjct:   99 GETVEEYYENLNKVLDHKPDIVIDDGCDLIFLLHTKRT----------ELLDNIMGGCEETTTGIIRLKAMEKEGALKFPVMDVNDA 175          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAB (Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahcY PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.128e-13
Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSSSMTVV 414
            ++ VKD+S A  G  +I+     MP L   R EF   +PFKG +I  +LH+ ++TA L+ TL A GA+V   + N  S+   VV
Sbjct:    7 DYCVKDISLAPEGMKKIDWVSRFMPVLQHIRREFEEKKPFKGVRIAATLHLEMKTAFLLLTLKAGGAKVSAAASNPLSTQDDVV 90          

HSP 2 Score: 40.817 bits (94), Expect = 1.128e-13
Identity = 34/86 (39.53%), Postives = 38/86 (44.19%), Query Frame = 3
Query:  438 GVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLV---GVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            G   EE YE   K  D              II DG       + + KE L    G SEETTTGV RL  M+ +  L FP I VNDS
Sbjct:  105 GESKEEYYEFMNKALDIRPN---------IIIDDGADMVSLVHTERKELLDEIWGASEETTTGVIRLRAMERDKVLRFPVIAVNDS 181          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 5.420e-13
Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +KVKD+S A  G  +I   +  MP L   +++F   +PFKG  I   LH+  +T  L  TL A GAEV    CN  S+
Sbjct:    3 YKVKDISLAPQGEKKIRWVQEHMPVLERIKSDFSEEKPFKGVTIGSCLHLEPKTINLGLTLQAGGAEVAMTGCNPLST 80          

HSP 2 Score: 40.817 bits (94), Expect = 5.420e-13
Identity = 26/83 (31.33%), Postives = 43/83 (51.81%), Query Frame = 3
Query:  438 GVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            G   EE YE   ++ D       E +I++    D +    ++  ++ + ++G  EETTTG+ RL  M  +G L FP + VND+
Sbjct:  100 GETNEEYYENIHRVLDH------EPEILIDDGADMIFLVHRERPELLDGIIGACEETTTGINRLRAMAADGALKFPVMAVNDA 176          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_THEAC (Adenosylhomocysteinase OS=Thermoplasma acidophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 1.188e-12
Identity = 27/72 (37.50%), Postives = 37/72 (51.39%), Query Frame = 1
Query:  199 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSSSMTVV 414
            G L +  A   MP +   R  F   +PFKG K+  +LH+  +T +    L   GAEV+  SCN  SS  +VV
Sbjct:    6 GFLRLAWARDHMPVIAEIRKRFQAEKPFKGIKVAMALHVEAKTGIFALLLKEGGAEVKMASCNPLSSDDSVV 77          

HSP 2 Score: 44.669 bits (104), Expect = 1.188e-12
Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 3
Query:  435 EGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +G  +EE YE   +  D       +  I++    D  K    +   + + ++G +EETTTGV+RL  M+ +G LLFP  +VND+
Sbjct:   92 KGETSEEYYEYLHRTLD------VQPDIIIDDGGDLTKIVHTERKDLAKNILGGNEETTTGVQRLRAMERSGVLLFPMFDVNDA 169          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_HALSA (Adenosylhomocysteinase OS=Halobacterium salinarium GN=ahcY PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 1.245e-11
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 1
Query:  184 SQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            S  + GR +I+ A   MP L A R EF  +QP  G  I  ++H+  +TA L+ET+   GAE+    CN  S+
Sbjct:   16 SARETGRAKIDWAFEHMPILSALREEFDANQPLAGETIGMAMHVEAKTAALVETMADAGAEIAITGCNPLST 87          

HSP 2 Score: 37.7354 bits (86), Expect = 1.245e-11
Identity = 30/108 (27.78%), Postives = 48/108 (44.44%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHE--------GVKAEEIYEKTGKL--PDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            L   DG  A L  HE        G + E  Y+    +   +P  T +    +V  +  D        + ++ + ++G +EETTTGV RL  M ++  L +P   VND+
Sbjct:   85 LSTHDGVSAALDAHESITSYAERGAEGEAYYDAIDAVLAHEPTVTVDDGGDLVFRVHED--------HPELIDTIIGGTEETTTGVHRLRAMDDDDALEYPVFAVNDT 184          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_ARCFU (Adenosylhomocysteinase OS=Archaeoglobus fulgidus GN=ahcY PE=3 SV=1)

HSP 1 Score: 45.0542 bits (105), Expect = 2.727e-11
Identity = 32/87 (36.78%), Postives = 42/87 (48.28%), Query Frame = 3
Query:  438 GVKAEEIYEKTGKL----PDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            G+  EE YE    +    PD    D A+   +L         + + Y    E++ G SEETTTGV RL  M+  G L FP I VND+
Sbjct:   89 GMDVEEYYEALRNVIRAEPDIVIDDGADLIFLL-------HGEMESY---AEKVKGASEETTTGVIRLRAMEREGVLKFPVIAVNDA 165          

HSP 2 Score: 43.8986 bits (102), Expect = 2.727e-11
Identity = 26/67 (38.81%), Postives = 36/67 (53.73%), Query Frame = 1
Query:  199 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            G  +IE AE  M  L   R +F   +P +G  +  +LH+  +TAVL+ TL   GAEV    CN  S+
Sbjct:    3 GFRKIEWAERYMKVLGKIREQFRKERPLEGFTVGMALHVEAKTAVLVRTLVDAGAEVAITGCNPMST 69          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_SULTO (Adenosylhomocysteinase OS=Sulfolobus tokodaii GN=ahcY PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++KVKDLS A+ G+ +IE AE+ MP LM  R +F   +P +G +I+  LH+T +TAVL++TL   GA V     N  S+
Sbjct:    2 DYKVKDLSLAEQGKKQIEWAEIHMPALMEIRKQFEKEKPLQGLRISAVLHVTKETAVLVKTLKIGGATVALAGSNPLST 80          
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_METMP8.240e-1540.79Adenosylhomocysteinase OS=Methanococcus maripaludi... [more]
SAHH_METJA8.690e-1438.46Adenosylhomocysteinase OS=Methanocaldococcus janna... [more]
SAHH_PYRAB1.128e-1339.29Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahc... [more]
SAHH_METTH5.420e-1339.74Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_THEAC1.188e-1237.50Adenosylhomocysteinase OS=Thermoplasma acidophilum... [more]
SAHH_HALSA1.245e-1138.89Adenosylhomocysteinase OS=Halobacterium salinarium... [more]
SAHH_ARCFU2.727e-1136.78Adenosylhomocysteinase OS=Archaeoglobus fulgidus G... [more]
SAHH_SULTO3.665e-1144.30Adenosylhomocysteinase OS=Sulfolobus tokodaii GN=a... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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