FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHOSH (Adenosylhomocysteinase OS=Rhodobacter sphaeroides GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.254e-27
Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +F VKDLS ADFGR E+++AE EMPGLMA R EFG S+P KGA+I GSLHMT+QTAVLIETL ALGA+VRW SCNIFS+
Sbjct:    3 DFIVKDLSLADFGRKELDIAETEMPGLMALREEFGASKPLKGARIAGSLHMTVQTAVLIETLVALGADVRWASCNIFST 81

HSP 2 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATL I  G + E    +T  +  P S +      +   IR  +   P  + K ++ + GVSEETTTGV RLY + + G L FPAINVNDS
Sbjct:  124 MILDDGGDATLYILLGARVEA--GETDLIAVPQSDEEV---CLFNQIRKRMAETPGWFTKQRDAIKGVSEETTTGVHRLYDLHKKGLLPFPAINVNDS 216
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPT (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27
Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 1 
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGAKI GSLHMTIQTAVLIETL ALGAEVRW SCNI+S+
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYST 85

HSP 2 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H+G++AE      G        ++ E +I   +I+  LK  PK Y   + + + GVSEETTTGV RLY M++ G LLFPAINVNDS
Sbjct:  129 MILDDGGDATMFVHQGLRAEN-----GDTMFLDQHNSEEEEIFFALIKRILKEKPKGYFATLAKNIKGVSEETTTGVHRLYDMEKAGKLLFPAINVNDS 222
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPA (Adenosylhomocysteinase OS=Rhodopseudomonas palustris GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27
Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 1 
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGAKI GSLHMTIQTAVLIETL ALGAEVRW SCNI+S+
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYST 85

HSP 2 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H+G++AE      G        ++ E +I   +I+  LK  PK Y   + + + GVSEETTTGV RLY M++ G LLFPAINVNDS
Sbjct:  129 MILDDGGDATMFVHQGLRAEN-----GDTMFLDQHNSEEEEIFFALIKRILKEKPKGYFATLAKNIKGVSEETTTGVHRLYDMEKAGKLLFPAINVNDS 222
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.793e-27
Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 1 
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETLTALGA+VRW SCNI+S+
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLTALGADVRWVSCNIYST 85

HSP 2 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH-KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H G++AE     T  L  P S +   F     +++  LK  PK Y  ++ + + GVSEETTTGV RLY MQ+ GTLL+PAINVNDS
Sbjct:  129 MILDDGGDATMYVHLGLRAEN--GDTAFLDKPGSDEEVIF---FALLKKQLKEKPKGYFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDS 222
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.793e-27
Identity = 59/79 (74.68%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ V D+  ADFGR EI +AE EMPGLMA R EFG SQP KGA+ITGSLHMTIQTAVLIETL ALGAEVRW +CNIFS+
Sbjct:   10 DYVVADIGLADFGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHMTIQTAVLIETLVALGAEVRWATCNIFST 88

HSP 2 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+    G + E        L +P++ +  EF   +  +++ LK  P         + GVSEETTTGV RLYQ+ ++G L FPAINVNDS
Sbjct:  131 MILDDGGDATMFALWGARVEA----GEPLFEPSNAEEIEF---VRALKEFLKRKPGYLTMSVAHIKGVSEETTTGVHRLYQIAKDGKLPFPAINVNDS 221
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FKV DLS A+FGR E++LAE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   14 NGIDFKVADLSLANFGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 95

HSP 2 Score: 93.2041 bits (230), Expect = 1.378e-18
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  GV+    YEK G +P     D+AE+++ L ++R   + D  K+ K+ + + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  149 MILDDGGDATMLVLRGVQ----YEKAGVVPPAEVDDSAEWKVFLNLLRKRFETDKGKWTKIAKSVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 242
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FKV DLS A+FGR E++LAE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   14 NGIDFKVADLSLANFGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 95

HSP 2 Score: 93.2041 bits (230), Expect = 1.378e-18
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  GV+    YEK G +P     D+AE+++ L ++R   + D  K+ K+ + + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  149 MILDDGGDATMLVLRGVQ----YEKAGVVPPAEVDDSAEWKVFLNLLRKRFETDKGKWTKIAKSVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 242
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 1 
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            A+ +++ VKD+S A++GR EI +AE EMPGLMA R EFGPSQP KGA+I GSLHMTIQTAVLI+TL ALGA+VRW SCNI+S+
Sbjct:    5 AAPQDYFVKDISLAEYGRKEIAIAETEMPGLMAAREEFGPSQPLKGARICGSLHMTIQTAVLIQTLEALGAQVRWVSCNIYST 87

HSP 2 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 48/98 (48.98%), Postives = 58/98 (59.18%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LI+DDGGDAT+ +  G KAE        L  P S +   F      I+  L A P  + K K  + GVSEETTTGV RLYQ+++ G L FPAINVNDS
Sbjct:  131 LILDDGGDATMYLILGEKAES---DPSFLEKPTSEEEKYF---FAQIKKRLTASPGWFKKTKAGVRGVSEETTTGVNRLYQLEKRGELPFPAINVNDS 222
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 58/78 (74.36%), Postives = 68/78 (87.18%), Query Frame = 1 
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +KV D++ ADFGR EI+LAE EMPGLMA R ++G S+P KGA+I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+S+
Sbjct:   15 YKVADITLADFGRKEIDLAEKEMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYST 92

HSP 2 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 54/102 (52.94%), Postives = 66/102 (64.71%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTD---NAEFQIVLT-IIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +IVDDGGDAT++IH G  AE          D A  D   +AE +I L  I++  L  D  ++H++ E + GVSEETTTGV RLYQMQE G LLFPA NVNDS
Sbjct:  136 VIVDDGGDATMMIHVGYDAEN---------DAAVLDKEVHAEDEIELNAILKKVLAEDKTRWHRVAEEMRGVSEETTTGVHRLYQMQEEGKLLFPAFNVNDS 228
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_BACFR (Adenosylhomocysteinase OS=Bacteroides fragilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 58/78 (74.36%), Postives = 68/78 (87.18%), Query Frame = 1 
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +KV D++ ADFGR EI+LAE EMPGLMA R ++G S+P KGA+I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+S+
Sbjct:   26 YKVADITLADFGRKEIDLAEKEMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYST 103

HSP 2 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT-IIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +IVDDGGDAT++IH G +AE       K        +AE +I L  I++  L  D +++H++   + GVSEETTTGV RLYQMQE G LLFPA NVNDS
Sbjct:  147 VIVDDGGDATMMIHVGYEAENNAAVLDK------EVHAEDEIELNAILKKVLAEDKERWHRVAAEVRGVSEETTTGVHRLYQMQEEGKLLFPAFNVNDS 239
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_RHOSH1.254e-2774.68Adenosylhomocysteinase OS=Rhodobacter sphaeroides ... [more]
SAHH_RHOPT2.139e-2771.43Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOPA2.139e-2771.43Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOPS2.793e-2770.24Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_NOVAD2.793e-2774.68Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]
SAHH_MYCLE3.648e-2771.95Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB3.648e-2771.95Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_HYPNA3.648e-2769.88Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]
SAHH_BACTN3.648e-2774.36Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_BACFR3.648e-2774.36Adenosylhomocysteinase OS=Bacteroides fragilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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