FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 95

HSP 2 Score: 96.2857 bits (238), Expect = 1.627e-19
Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G++    YEK G +P     D+AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ  E G L FPAINVNDS
Sbjct:  149 MILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDSAEWKVFLGLLRSRFETDKGKWTKIAESVKGVTEETTTGVLRLYQFAEAGDLAFPAINVNDS 242
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 98

HSP 2 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G++    YEK G +P     D AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  152 MILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 245
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 98

HSP 2 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G++    YEK G +P     D AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  152 MILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 245
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 95

HSP 2 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G++    YEK G +P     D+AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  149 MILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDSAEWKVFLGLLRSRFETDKGKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 242
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 98

HSP 2 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G++    YEK G +P     D AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  152 MILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 245
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 98

HSP 2 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G++    YEK G +P     D AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  152 MILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 245
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 98

HSP 2 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G++    YEK G +P     D AE++I L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  152 MILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKIFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 245
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27
Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ VKD+S ADFGR E+ LAE EMPGLMA R EFGP QP KGA+I GSLHMTIQT VLIETL ALGA++RW SCNI+S+
Sbjct:    9 DYIVKDISLADFGRKELSLAETEMPGLMATREEFGPKQPLKGARIAGSLHMTIQTGVLIETLAALGADIRWVSCNIYST 87

HSP 2 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH-KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H G++AE     T  L  P S +    ++   +++  LK  PK Y  ++ + + GVSEETTTGV RLY MQ+ GTLL+PAINVNDS
Sbjct:  131 MILDDGGDATMYVHLGLRAEN--GDTAFLDKPGSEEE---EVFFALLKKQLKEKPKGYFAEIAKSIKGVSEETTTGVHRLYDMQKAGTLLWPAINVNDS 224
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.223e-27
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ V D+S A +GR EIE+AE EMPGLMACR EFG ++P KGA+ITGSLHMTIQTAVLIETL +LGAEVRW SCNIFS+
Sbjct:    5 DYVVADMSLAAWGRKEIEIAETEMPGLMACREEFGEAKPLKGARITGSLHMTIQTAVLIETLKSLGAEVRWASCNIFST 83

HSP 2 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +        ++ D  E +I+   I+  +   P  + + +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDS
Sbjct:  127 MILDDGGDATMYILLGARAEAGEDVL------SNPDGEEEEILFQQIKKRMAETPGFFTRQRAAIRGVTEETTTGVNRLYQLQKKGLLPFPAINVNDS 218
[Close]
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.223e-27
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ VKD+S A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA++RW SCNI+S+
Sbjct:    9 DYIVKDISLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYST 87

HSP 2 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 3 
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H G++AE     T  L  PAS +    ++   +++  LK  PK Y   +   + GVSEETTTGV RLY MQ+ GTLL+PAINVNDS
Sbjct:  131 MILDDGGDATMYVHLGLRAEN--GDTAFLDKPASEEE---EVFFALLKKQLKEKPKGYFAAIAASIKGVSEETTTGVHRLYDMQKAGTLLWPAINVNDS 224
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_MYCUA4.765e-2770.73Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCTU4.765e-2770.73Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA4.765e-2770.73Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCMM4.765e-2770.73Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_MYCBT4.765e-2770.73Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP4.765e-2770.73Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBO4.765e-2770.73Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_BRAJA4.765e-2772.15Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_MESSB6.223e-2773.42Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_BRASB6.223e-2772.15Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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