FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +G EFKV DLS AD+GR +IEL+E EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETL ALGAEVRW SCNIFS+
Sbjct:   14 NGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVALGAEVRWASCNIFST 95          

HSP 2 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G +    YEK G +P     D+AE ++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDS
Sbjct:  153 MILDDGGDATMLVLRGAQ----YEKAGVVPPDDEDDSAEHRVFLNLLRARFETDKTKWTKISESIKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDS 246          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_CAEEL (Adenosylhomocysteinase OS=Caenorhabditis elegans GN=ahcy-1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +KV D+  ADFGR EI LAE EMPGLMA R+++GPSQP KGA+I G LHMTIQTAVLIETLTALGAEV+W SCNIFS+
Sbjct:    8 YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIETLTALGAEVQWSSCNIFST 85          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26
Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNI+S+
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYST 85          

HSP 2 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH-KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H G++AE     T  L  P S +   F     +++  LK  PK Y  ++ + + GVSEETTTGV RLY MQ+ GTLL+PAINVNDS
Sbjct:  129 MILDDGGDATMYVHLGLRAEN--GDTAFLDKPGSDEEVIF---FALLKKQLKEKPKGYFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDS 222          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_LEIDO (Adenosylhomocysteinase OS=Leishmania donovani PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++KVKD+S A++GR  IELAE EMPGLM  R E+GPSQP KGAKI G LHMT+QTAVLIETL ALGA+VRW SCNIFS+
Sbjct:    3 DYKVKDISLAEWGRKAIELAENEMPGLMELRREYGPSQPLKGAKIAGCLHMTVQTAVLIETLKALGADVRWSSCNIFST 81          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V K     +  V DLS AD+GR EI++AE EMPGLMA R EF  SQP KGA+ITGSLHMTIQTAVL+ETL ALGA+VRW SCNIFS+
Sbjct:    3 AVLKPTPTHDHHVADLSLADWGRKEIKIAETEMPGLMAIRQEFAASQPLKGARITGSLHMTIQTAVLVETLQALGAQVRWASCNIFST 90          

HSP 2 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 49/99 (49.49%), Postives = 61/99 (61.62%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL-TIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G KAE       K P   S   +E +  L   I+  L  DP  Y +   +++GV+EETTTGV RL +M   GTLLF AINVNDS
Sbjct:  138 MILDDGGDATLLMHLGQKAE-------KDPSVISKPTSEEETCLFAAIKAKLAQDPTWYTRKSAQIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDS 229          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+S+
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYST 84          

HSP 2 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H G++AE     T  L  P S +    ++   +++  L   PK +   + + + GVSEETTTGV RLY + + G LLFPAINVNDS
Sbjct:  128 MILDDGGDATMFVHLGLRAEN--GDTAFLDKPESEEE---EVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDS 221          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+S+
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYST 84          

HSP 2 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H G++AE     T  L  P S +    ++   +++  L   PK +   + + + GVSEETTTGV RLY + + G LLFPAINVNDS
Sbjct:  128 MILDDGGDATMFVHLGLRAEN--GDTAFLDKPESEEE---EVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDS 221          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 56/83 (67.47%), Postives = 70/83 (84.34%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            A+ + + VKD+S A +GR+E ++AE+EMPGLMA R E+  SQP KGA+I GSLHMT+QTA+LIETLTALGAEVRW SCNIFS+
Sbjct:    5 AADKPYIVKDMSLAKWGRIEFDMAEIEMPGLMALREEYKDSQPLKGARIAGSLHMTVQTAILIETLTALGAEVRWASCNIFST 87          

HSP 2 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 47/98 (47.96%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +  G KAE        L  P S +      +   I+  + A P  + K K  + GVSEETTTGV RLYQMQ+ G L FPAINVNDS
Sbjct:  131 MILDDGGDATMYLILGEKAEN---DPSVLNHPKSEEET---FLFAQIKKRIAATPGWFAKAKAAIQGVSEETTTGVMRLYQMQKRGELPFPAINVNDS 222          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_ROSDO (Adenosylhomocysteinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26
Identity = 56/80 (70.00%), Postives = 69/80 (86.25%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++F VKD++ A+FGR E+++AE EMPGLMA RAE+G S+P  GA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:    3 KDFIVKDIALAEFGRKELDIAETEMPGLMALRAEYGDSKPLAGARIVGSLHMTIQTAVLIETLVALGADVRWASCNIFST 82          

HSP 2 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            LI+DDGGDATL +  G +AE   E    +P P S +    + +   I+  + A P  + K+++++ GVSEETTTGV RLY + + G L FPAINVNDS
Sbjct:  124 LILDDGGDATLYVLLGARAEAGEEI---IPVPTSEEE---EAIKAQIKKRMAASPGWFTKVRDQIKGVSEETTTGVHRLYDLVKQGQLPFPAINVNDS 215          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHILO (Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26
Identity = 55/80 (68.75%), Postives = 68/80 (85.00%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ V D+S A +GR E+++AE EMPGLMACR EFG  +P KGA+ITGSLHMTIQTAVLIETL ALGA++RW SCNIFS+
Sbjct:    5 KDYVVADISLAGWGRKELDIAETEMPGLMACREEFGAKKPLKGARITGSLHMTIQTAVLIETLKALGADIRWASCNIFST 84          

HSP 2 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +    L +P S +   F      ++  LKA P  + K K  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILIGARAEAGEDV---LSNPQSEEEEYFYAQ---VKKRLKASPGFFTKQKAAIRGVTEETTTGVNRLYQLQKKGLLPFPAINVNDS 219          
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_MYCPA8.127e-2771.95Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_CAEEL8.127e-2775.64Adenosylhomocysteinase OS=Caenorhabditis elegans G... [more]
SAHH_RHOP21.061e-2669.05Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_LEIDO1.061e-2673.42Adenosylhomocysteinase OS=Leishmania donovani PE=3... [more]
SAHH_METPP1.386e-2668.18Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_METEP1.386e-2668.67Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC41.386e-2668.67Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_MARMM1.386e-2667.47Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_ROSDO1.811e-2670.00Adenosylhomocysteinase OS=Roseobacter denitrifican... [more]
SAHH_RHILO1.811e-2668.75Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY P... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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