FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFS+
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFST 95          

HSP 2 Score: 95.1301 bits (235), Expect = 3.625e-19
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+L+  G +    +EK G +P     D+AE+++ L ++R+  + D  K+ K+ E + GV+EETTTGV RLYQ +  G L FPAINVNDS
Sbjct:  147 MILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKVFLNLLRERFETDKTKWTKIAESVKGVTEETTTGVLRLYQFEAAGELPFPAINVNDS 240          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +S      G  +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFS+
Sbjct:    1 MSATTQEKGLNYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFST 89          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +S      G  +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFS+
Sbjct:    1 MSATTQEKGLNYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFST 89          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METNO (Adenosylhomocysteinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26
Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            S +++ V+D+  ADFGR EI +AE EMPGLMA R E+  SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+S+
Sbjct:    3 SAQDYIVRDIGLADFGRKEIAIAETEMPGLMAVRREYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYST 84          

HSP 2 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +H G++AE      G         + E +I   +I+  LK  P+ +   + E + GVSEETTTGV RLY +   G LLFPAINVNDS
Sbjct:  128 MILDDGGDATMFVHAGLRAER-----GDAVFLDKPGSEEEEIFFALIKRMLKEKPQGWFAGLAESIKGVSEETTTGVHRLYLLAREGKLLFPAINVNDS 221          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_AGRT5 (Adenosylhomocysteinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ V D++ A FGR E+++AE EMPGLM+CR EFG S+P KGA+ITGSLHMTIQT VLIETL  LGAE+RW SCNIFS+
Sbjct:    5 KDYIVADINLAAFGRKELDIAETEMPGLMSCRKEFGESKPLKGARITGSLHMTIQTGVLIETLKELGAEIRWASCNIFST 84          

HSP 2 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ I  G +AE   +    L +P S +    +I+   I   LKA P  + K ++ L GV+EETTTGV RLY + + G L FPAINVNDS
Sbjct:  128 MILDDGGDATMYILLGARAEAGEDV---LSNPGSEEE---EILFAQINKRLKASPGWFTKQRDALKGVTEETTTGVHRLYDLAKKGLLPFPAINVNDS 219          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26
Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +V  +AS  + KV DLS A +GR EI +AE EMPGLMA R E+  +QP KGA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFS+
Sbjct:    3 AVANAASFDDHKVADLSLAGWGRKEIAIAETEMPGLMAIREEYRAAQPLKGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFST 90          

HSP 2 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+  G +AE+       L +P   +    +++   IR  L A P  Y +++  + GV+EETTTGV RLY+MQ  G L FPAINVNDS
Sbjct:  134 MILDDGGDATLLVTLGARAEK---DASLLANPTCEEE---EVLFAAIRKRLAAKPGWYSRIQAGIKGVTEETTTGVHRLYEMQAKGRLPFPAINVNDS 225          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +SV        +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFS+
Sbjct:    1 MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFST 89          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +SV        +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFS+
Sbjct:    1 MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFST 89          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_GRABC (Adenosylhomocysteinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            M  S+  +A   ++KV+D+  AD+GR EI +AE EMPGLMA R E+G S+P  GA+I G LHMTIQTAVLIETLTALGA VRW SCNIFS+
Sbjct:    1 MESSMPDTAVAEDYKVRDIGLADWGRKEIRMAEDEMPGLMALREEYGNSKPLAGARIAGCLHMTIQTAVLIETLTALGATVRWSSCNIFST 91          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_FLAJ1 (Adenosylhomocysteinase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 59/78 (75.64%), Postives = 64/78 (82.05%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            FKVKD+S A +GR EIELAE EMPGLMA RAE+   QP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNIFS+
Sbjct:   11 FKVKDISLAAWGRKEIELAEAEMPGLMALRAEYKDEQPLKGARIAGCLHMTIQTAVLIETLIALGAEVTWSSCNIFST 88          
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_MYCSJ5.268e-2668.24Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_LEPBL5.268e-2667.42Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ5.268e-2667.42Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_METNO6.880e-2668.29Adenosylhomocysteinase OS=Methylobacterium nodulan... [more]
SAHH_AGRT56.880e-2667.50Adenosylhomocysteinase OS=Agrobacterium tumefacien... [more]
SAHH_METCA8.986e-2668.18Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_LEPIN1.174e-2567.42Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC1.174e-2567.42Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_GRABC1.174e-2563.74Adenosylhomocysteinase OS=Granulibacter bethesdens... [more]
SAHH_FLAJ11.174e-2575.64Adenosylhomocysteinase OS=Flavobacterium johnsonia... [more]

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Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
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