FC929866

Overview
NameFC929866
Unique NameFC929866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +  + D+S AD+GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:   10 DLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFST 88          

HSP 2 Score: 82.4185 bits (202), Expect = 2.432e-15
Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L   A+  + E +I+   I+  +  DP  Y +    ++GV+EETTTGV RL +M   GTLLF AINVNDS
Sbjct:  136 MILDDGGDATLLMHLGQRAEK------DLSVVANPTSEEERILFAAIKAKIAQDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDS 227          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_CORGL (Adenosylhomocysteinase OS=Corynebacterium glutamicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +FKV DLS A+ GR +I LAE EMPGLM  R EF   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:    2 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRKEFADEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFST 80          

HSP 2 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +  G +    YE+ G +P   + D+ E+   L ++R+ L A+P K+ K+ E + GV+EETTTGV RLY   E G L FPA+NVND+
Sbjct:  131 MILDDGGDATMAVIRGRE----YEQAGLVPPAEANDSDEYIAFLGMLREVLAAEPGKWGKIAEAVKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDA 224          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_CORGB (Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +FKV DLS A+ GR +I LAE EMPGLM  R EF   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:    6 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRKEFADEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFST 84          

HSP 2 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +  G +    YE+ G +P   + D+ E+   L ++R+ L A+P K+ K+ E + GV+EETTTGV RLY   E G L FPA+NVND+
Sbjct:  135 MILDDGGDATMAVIRGRE----YEQAGLVPPAEANDSDEYIAFLGMLREVLAAEPGKWGKIAEAVKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDA 228          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_CANAL (Adenosylhomocysteinase OS=Candida albicans GN=SAH1 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            SA    +KV D+S A FGR +IEL+E EMPGLM  R ++GPSQP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNIFS+
Sbjct:    3 SAPATNYKVADISLAAFGRKDIELSENEMPGLMYIRKKYGPSQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIFST 86          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            ++ V DL+ A +GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW SCNIFS+
Sbjct:   10 DYVVADLALAGWGRKEIRIAETEMPGLMAIREEFAVVQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNIFST 88          

HSP 2 Score: 85.1149 bits (209), Expect = 3.751e-16
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L  P S +    +++   IR  L +DP  Y      + GV+EETTTGV RLYQM E G L FPAINVNDS
Sbjct:  132 MILDDGGDATLLLHLGARAEK---DVSVLAKPGSEEE---RVLFAAIRAKLASDPTWYSVRLAAIRGVTEETTTGVHRLYQMFERGELKFPAINVNDS 223          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +KVKD+S AD+GR EIELAE EMPGLMA R+++G  +P KGA+I G LHMTIQTAVLIETL  LGAEV W SCNIFS+
Sbjct:   11 YKVKDISLADYGRKEIELAENEMPGLMALRSKYGAEKPLKGARIAGCLHMTIQTAVLIETLVELGAEVTWSSCNIFST 88          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25
Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            + D+S AD+GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFS+
Sbjct:   13 IADISLADWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFST 88          

HSP 2 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L  P S +    +I+   I+  L  D   Y +   +++GV+EETTTGV RL +M   GTLLF AINVNDS
Sbjct:  136 MILDDGGDATLLMHLGKRAEK---DASVLAHPGSEEE---RILFAAIKAKLAEDSTWYSRKSAQIIGVTEETTTGVHRLKEMSAKGTLLFRAINVNDS 227          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 58/86 (67.44%), Postives = 67/86 (77.91%), Query Frame = 1
Query:  142 QKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            Q  A   +FKV DLS A FGR EI LAE EMPGLM+ R E+  +QP  GA+ITGSLHMT+QTAVLIETL ALGA+VRW SCNI+S+
Sbjct:    4 QPPADFTDFKVADLSLAAFGRKEITLAEHEMPGLMSIREEYAAAQPLAGARITGSLHMTVQTAVLIETLVALGADVRWVSCNIYST 89          

HSP 2 Score: 90.1225 bits (222), Expect = 1.166e-17
Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTII-RDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H+GV+    Y KTG LP+    +N E  +V  ++ R GL      +  M   + GV+EETTTGV RLY+M  +GTLLFPAINVND+
Sbjct:  133 MILDDGGDATLLVHKGVE----YRKTGILPE---AENEELAVVRALLDRSGLD-----WTAMSSEIRGVTEETTTGVHRLYEMHRDGTLLFPAINVNDA 219          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_COREF (Adenosylhomocysteinase OS=Corynebacterium efficiens GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +FKV DLS A+ GR +I LAE EMPGLM  R E+   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFS+
Sbjct:    6 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRREYAEEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFST 84          

HSP 2 Score: 89.7373 bits (221), Expect = 1.523e-17
Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDAT+ +  G +    YEK G +P P + D+ E+   L ++R+ L  +P K+ ++ + + GV+EETTTGV RLY   E G L FPA+NVND+
Sbjct:  135 MILDDGGDATMAVIRGRE----YEKAGVVPQPEANDSDEYIAFLGMLREVLAEEPDKWTRLADSIKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDA 228          
BLAST of FC929866 vs. ExPASy Swiss-Prot
Match: SAHH_MYXXD (Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSS 399
            +++ + DLS AD+GR EI +AE EMP LMA R E+  +QP KGA++TGSLHMTIQTAVL+ETL ALGAEVRW SCNIFS+
Sbjct:   10 QDYAIADLSLADWGRKEIRIAESEMPALMAIREEYAKTQPLKGARVTGSLHMTIQTAVLVETLQALGAEVRWASCNIFST 89          

HSP 2 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  393 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 686
            +I+DDGGDATLL+H G +AE+       L +P S +  E   +   I+  L  D   Y +   +++GV+EETTTGV RL +M   GTLLF AINVNDS
Sbjct:  137 MILDDGGDATLLMHLGKRAEK---DASVLANPQSEEERE---LYAAIKAKLAEDATWYTRKSAKILGVTEETTTGVHRLQEMSAKGTLLFRAINVNDS 228          
The following BLAST results are available for this feature:
BLAST of FC929866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_ACIAC1.174e-2570.89Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_CORGL1.533e-2572.15Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_CORGB1.533e-2572.15Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_CANAL1.533e-2569.05Adenosylhomocysteinase OS=Candida albicans GN=SAH1... [more]
SAHH_AZOSE1.533e-2573.42Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_RHOBA2.614e-2571.79Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_ACISJ2.614e-2573.68Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_STRAZ3.414e-2567.44Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_COREF3.414e-2570.89Adenosylhomocysteinase OS=Corynebacterium efficien... [more]
SAHH_MYXXD4.459e-2567.50Adenosylhomocysteinase OS=Myxococcus xanthus (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34001C08EF PostHarvC1 Citrus clementina cDNA clone C34001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929866 ID=FC929866; Name=FC929866; organism=Citrus clementina; type=EST; length=687bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCATCGT
CGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTG
AGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGAC
AACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGC
CGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCG
AAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGA
ACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
back to top