FC929868

Overview
NameFC929868
Unique NameFC929868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_FUSNP (Chaperone protein dnaJ OS=Fusobacterium nucleatum subsp. polymorphum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 67/201 (33.33%), Postives = 92/201 (45.77%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD---------PEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNP-----FDIF---------EXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            YYE+LGV K+A+E+++KKAYRKAAMK HPDK  +          EKFKE+ +AY+VLSD EK+  YDQ+G  A ++G  G G   N       DIF                             + G D+ + L+++LE+   G  K +   R   C                  C G G   T ++  LG + Q Q VC
Sbjct:    6 YYEVLGVDKNASENDIKKAYRKAAMKYHPDKFANATDAEKKDAEEKFKEINEAYQVLSDNEKKQQYDQFGHAAFEQGGAGFGGGFNAGGFDFGDIFGDNIFGGGGGFGGFEGFSGFGGSSRRSYVEPGNDLRYNLEITLEEAAKGVEKTIKYKRTGKCEHCHGTGAEDDKMKTCPTCNGQGTIKTQQRTILG-VMQSQSVC 205          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ESCF3 (Chaperone protein dnaJ OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOUT (Chaperone protein dnaJ OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSM (Chaperone protein dnaJ OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSE (Chaperone protein dnaJ OS=Escherichia coli (strain SE11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLU (Chaperone protein dnaJ OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLC (Chaperone protein dnaJ OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOL6 (Chaperone protein dnaJ OS=Escherichia coli O6 GN=dnaJ PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOHS (Chaperone protein dnaJ OS=Escherichia coli O9:H4 (strain HS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO8A (Chaperone protein dnaJ OS=Escherichia coli O8 (strain IAI1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSL 571
            YYEILGVSK+A E E+KKAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  YDQYG  A ++G  G G      D  +                    +G D+ + ++++LE+   G TK++ +
Sbjct:    6 YYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRI 138          
The following BLAST results are available for this feature:
BLAST of FC929868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_FUSNP4.635e-2033.33Chaperone protein dnaJ OS=Fusobacterium nucleatum ... [more]
DNAJ_ESCF34.635e-2040.60Chaperone protein dnaJ OS=Escherichia fergusonii (... [more]
DNAJ_ECOUT4.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSM4.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSE4.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOLU4.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli O17:K52... [more]
DNAJ_ECOLC4.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOL64.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli O6 GN=d... [more]
DNAJ_ECOHS4.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli O9:H4 (... [more]
DNAJ_ECO8A4.635e-2040.60Chaperone protein dnaJ OS=Escherichia coli O8 (str... [more]

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Properties
Property NameValue
Genbank descriptionC34001C10EF PostHarvC1 Citrus clementina cDNA clone C34001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929868 ID=FC929868; Name=FC929868; organism=Citrus clementina; type=EST; length=720bp
GGAAATGCGCTTTGTGACGAGTGAGAGTTGAGAGGGACGATTGAAAATTC
TCCCTCTTAAGCCTCGTATCTCAAAATTCGCTCTCTCAGCTTCGAAATCT
TAGTTTAAAGGTTAGAATTGTATCACATACTGAAGTGATTCAATCATGTT
TGGTCGTACCCCAAGAAGAAGTAATAACACCAAGTATTATGAAATTCTTG
GTGTTTCGAAAAGTGCTACTGAAGATGAACTTAAGAAGGCATATAGAAAA
GCTGCTATGAAGAATCATCCCGACAAAGGTGGAGACCCTGAGAAGTTCAA
GGAGTTGGGTCAAGCTTATGAGGTTCTTTCTGATCCGGAGAAAAGAGATA
TTTATGATCAATATGGTGAAGATGCTCTTAAAGAAGGAATGGGAGGAGCT
GGGGCAGCTCATAATCCATTTGATATATTTGAATCATTTTTTGGTGGAGG
AACTTTTGGTGCTGGTGGTAGCTCAAGAGGTAGAAGGCGGAAGCAAGGTG
AAGATGTTGTGCATACTCTGAAGGTCTCCTTGGAGGACTTGTACAATGGG
ACAACTAAGAAACTCTCTCTTTCAAGGAATATTCTGTGCCCTAAATGCAA
AGGGAAAGGTTCTAAAAGTGGGGCCTTGGGAAAATGTTATGGTTGCCAAG
GTACTGGAATGAAAATCACNAACAGGCAGATTGGACTTGGCATGATTCAA
CAGATGCAACATGTCTGTCC
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