FC929868

Overview
NameFC929868
Unique NameFC929868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMO (Chaperone protein dnaJ OS=Listeria monocytogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPD---KGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGA----AHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILC 589
            YYE+LG+SKSA+ DE+KKAYRK + + HPD   + G  EKFKE+ +AYE LSDP+KR  YDQYG     +G GG GA        F  FE                   +QG D+ +T+++  ++   G   ++ + R   C
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGGAGGGFGGGGFSGFEDIFDTFFGGGGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENC 147          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEI8 (Chaperone protein dnaJ OS=Haemophilus influenzae (strain 86-028NP) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE--GMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILC 589
            YYE+LG+ K A+ED++K+AY++ A K+HPDK        EKFKE+ +AYEVL D +KR  YDQYG  A ++  G GG G      D  +                    +GED+ + L++SLE+   GTTK + ++    C
Sbjct:    6 YYEVLGLQKGASEDDIKRAYKRLASKHHPDKNQGSKEAEEKFKEINEAYEVLGDDQKRAAYDQYGHAAFEQGGGTGGFGGGFGGADFGDMFGDIFGDIFGGGRGRQRVVRGEDLRYDLEISLEEAVKGTTKDIQINTLAHC 146          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATT (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21
Identity = 65/184 (35.33%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKE--GMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            YYEIL VSK+A+  E+K+AYRK AM+ HPD+  GD E   KFKE+ +AYE+LSD  KR  YDQ+G   + +  G GG G      DIF+                    +G D+ +TL+++LE+ + G  K++++ R   C                + C G G     RQ G    +Q   VC
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFGGFEDIFD---TFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG--TIRRQQGFFAFEQTCPVC 184          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAT1 (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21
Identity = 65/184 (35.33%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKE--GMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            YYEIL VSK+A+  E+K+AYRK AM+ HPD+  GD E   KFKE+ +AYE+LSD  KR  YDQ+G   + +  G GG G      DIF+                    +G D+ +TL+++LE+ + G  K++++ R   C                + C G G     RQ G    +Q   VC
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFGGFEDIFD---TFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG--TIRRQQGFFAFEQTCPVC 184          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21
Identity = 51/86 (59.30%), Postives = 63/86 (73.26%), Query Frame = 2
Query:  179 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKE--------GMGGAGAA 409
            TK Y++LGVS SA E ELKK YRKAA+K HPDK  GD EKFKE+ +A+E+L+DP+KR+IYDQYG +A +         G GGAG A
Sbjct:    5 TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSGGPSFGPGGPGGAGGA 90          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21
Identity = 63/188 (33.51%), Postives = 89/188 (47.34%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALK----EGMGGAGA----------------------AHNPFDIF-----------------------EXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCP 592
            YY+ LG+++ A+++E+K+AYR+ A++ HPDK  +P   EKFKE+ +AY+VLSDP KR+I+D+YGE+ LK     G  G GA                        NPFD F                                           KQ   V H L+VSLE++Y+G TKK+ +S   L P
Sbjct:    5 YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNP 192          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT2 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21
Identity = 66/190 (34.74%), Postives = 95/190 (50.00%), Query Frame = 2
Query:  173 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG--------AGAAHNPF-DIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYG-CQGTGMKITNRQIGLGMIQQ 703
            NNT+YY+ LG+SK A++DE+K+AYRK + K HPD   +P   EK+KE+ +AYE LSD +KR  YDQYG D    G GG         GA    F DIF                    +QG+D+ + + +S E+   G  K++  +R + C                 G C G G+   + Q  LGM+++
Sbjct:    2 NNTEYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPDG-ANGFGGQGSFGGFDGGAGFGGFEDIFS-----SFFGGGATRNPNAPRQGDDLQYRVNLSFEEAVFGAEKEIHYNREVTCKTCSGSGAKPGTSPVTCGRCHGHGVINVDTQTPLGMMRR 185          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT1 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21
Identity = 66/190 (34.74%), Postives = 95/190 (50.00%), Query Frame = 2
Query:  173 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG--------AGAAHNPF-DIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYG-CQGTGMKITNRQIGLGMIQQ 703
            NNT+YY+ LG+SK A++DE+K+AYRK + K HPD   +P   EK+KE+ +AYE LSD +KR  YDQYG D    G GG         GA    F DIF                    +QG+D+ + + +S E+   G  K++  +R + C                 G C G G+   + Q  LGM+++
Sbjct:    2 NNTEYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPDG-ANGFGGQGSFGGFDGGAGFGGFEDIFS-----SFFGGGATRNPNAPRQGDDLQYRVNLSFEEAVFGAEKEIHYNREVTCKTCSGSGAKPGTSPVTCGRCHGHGVINVDTQTPLGMMRR 185          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPD---KGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNP---------FDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILC 589
            YYE+LGVSK A++DE+KKAYRK + K HPD   + G  EKFKE+ +AYEVLSD  KR  YDQ+G D  + G GG G               DIF                    ++G+D+ +T+ V+ E+   GT K++S+ + + C
Sbjct:    6 YYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEEGAEEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGGQGFGGGQDFGGFGGGFEDIFS-----SFFGGGAQRDPNVPRKGDDLQYTMTVTFEEAAFGTEKEISIRKQVKC 147          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21
Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 2
Query:  185 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAA-----HNPFDIFEXXXXXXXXXXXXXXXXXXXKQ-----GEDVVHTLKVSLEDLYNGTTKKLSLSRNILC 589
            YY+ILGV + A++ E+KKAYRK AM+ HPD+   DPE   KFKE  +AYEVLSDPEKR  YDQ+G D +  G GG         H+  DIF+                   ++     G D+  +L ++LE++  GT K L L + + C
Sbjct:    5 YYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGVDSGAGGGRRGRGRGFHDIEDIFDAFSDIFGGAPGGGRGRGRSERGRGRPGSDLRVSLSLTLEEIAEGTEKNLRLQKYLEC 153          
The following BLAST results are available for this feature:
BLAST of FC929868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LISMO7.151e-2138.73Chaperone protein dnaJ OS=Listeria monocytogenes G... [more]
DNAJ_HAEI87.151e-2138.30Chaperone protein dnaJ OS=Haemophilus influenzae (... [more]
DNAJ_FRATT7.151e-2135.33Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRAT17.151e-2135.33Chaperone protein dnaJ OS=Francisella tularensis s... [more]
SIS1_YEAST9.339e-2159.30Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJB1_HUMAN9.339e-2133.51DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNAJ_STRT29.339e-2134.74Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_STRT19.339e-2134.74Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_STACT9.339e-2139.46Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]
DNAJ_SALRD9.339e-2140.27Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34001C10EF PostHarvC1 Citrus clementina cDNA clone C34001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929868 ID=FC929868; Name=FC929868; organism=Citrus clementina; type=EST; length=720bp
GGAAATGCGCTTTGTGACGAGTGAGAGTTGAGAGGGACGATTGAAAATTC
TCCCTCTTAAGCCTCGTATCTCAAAATTCGCTCTCTCAGCTTCGAAATCT
TAGTTTAAAGGTTAGAATTGTATCACATACTGAAGTGATTCAATCATGTT
TGGTCGTACCCCAAGAAGAAGTAATAACACCAAGTATTATGAAATTCTTG
GTGTTTCGAAAAGTGCTACTGAAGATGAACTTAAGAAGGCATATAGAAAA
GCTGCTATGAAGAATCATCCCGACAAAGGTGGAGACCCTGAGAAGTTCAA
GGAGTTGGGTCAAGCTTATGAGGTTCTTTCTGATCCGGAGAAAAGAGATA
TTTATGATCAATATGGTGAAGATGCTCTTAAAGAAGGAATGGGAGGAGCT
GGGGCAGCTCATAATCCATTTGATATATTTGAATCATTTTTTGGTGGAGG
AACTTTTGGTGCTGGTGGTAGCTCAAGAGGTAGAAGGCGGAAGCAAGGTG
AAGATGTTGTGCATACTCTGAAGGTCTCCTTGGAGGACTTGTACAATGGG
ACAACTAAGAAACTCTCTCTTTCAAGGAATATTCTGTGCCCTAAATGCAA
AGGGAAAGGTTCTAAAAGTGGGGCCTTGGGAAAATGTTATGGTTGCCAAG
GTACTGGAATGAAAATCACNAACAGGCAGATTGGACTTGGCATGATTCAA
CAGATGCAACATGTCTGTCC
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