FC929869

Overview
NameFC929869
Unique NameFC929869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13706 contig Ccv1_Contig13706:776..1467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_SCHPO (Eukaryotic translation initiation factor 2 subunit gamma OS=Schizosaccharomyces pombe GN=tif213 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.570e-86
Identity = 157/230 (68.26%), Postives = 193/230 (83.91%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            +E+ A   +++I+KFI+GTVA+ +P+VPISAQLKYNID + EYIVKKIPIP R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL GVL++N  IE+RPGIV KD+ G I+C PI+SRI+SLFAE N+L+ AVPGGLIGVGTT+DPTL RADRLVGQVLG  G+LPEV+ ELE+N+FLLRRLLGV++ G +   KV KLAK E+LM+NIGS STG RV+ VK D+A
Sbjct:  176 RESAAEEHYQSILKFIKGTVAENSPIVPISAQLKYNIDAILEYIVKKIPIPVRDFTTAPRLIVIRSFDVNKPGAEVDDLKGGVAGGSILTGVLRLNDEIEIRPGIVTKDDDGRIRCQPIFSRIISLFAEHNDLKIAVPGGLIGVGTTVDPTLCRADRLVGQVLGSKGNLPEVYTELEINYFLLRRLLGVKS-GDKNTTKVQKLAKNEVLMVNIGSTSTGGRVMMVKADMA 404          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_YEAST (Eukaryotic translation initiation factor 2 subunit gamma OS=Saccharomyces cerevisiae GN=GCD11 PE=1 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.276e-84
Identity = 151/230 (65.65%), Postives = 191/230 (83.04%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            +E  A+   ++I+KFI+GT+ADGAP+VPISAQLKYNID V E+IVK IP+P R+F+  P +IVIRSFDVNKPG E++D++GGVAGGSIL GV K+   IE+RPGIV KD+ G I+C PI+S IVSLFAEQN+L+FAVPGGLIGVGT +DPTL RADRLVGQV+G  G LP ++ ++E+N+FLLRRLLGV+T G ++Q KV KL   E+LM+NIGS +TGARV+AVK D+A
Sbjct:  255 REESALEHQKSILKFIRGTIADGAPIVPISAQLKYNIDAVNEFIVKTIPVPPRDFMISPRLIVIRSFDVNKPGAEIEDLKGGVAGGSILNGVFKLGDEIEIRPGIVTKDDKGKIQCKPIFSNIVSLFAEQNDLKFAVPGGLIGVGTKVDPTLCRADRLVGQVVGAKGHLPNIYTDIEINYFLLRRLLGVKTDG-QKQAKVRKLEPNEVLMVNIGSTATGARVVAVKADMA 483          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_PYRFU (Translation initiation factor 2 subunit gamma OS=Pyrococcus furiosus GN=eif2g PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.037e-46
Identity = 100/224 (44.64%), Postives = 146/224 (65.18%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A+  +  I +FI+GTVA+ AP++PISA    NIDV+ + I + IP P+R+   PP M+V+RSFDVNKPG   + + GGV GGSI++G LKV   IE+RPG V  +E G IK  PI + IVSL A    ++ A PGGL+G+GT +DP LT+ D + G V+G+ G LP V+ +L +   LL R++     G+E++  V  + ++E+L+LN+G+  T   V A+  D
Sbjct:  156 ALENYRQIKEFIKGTVAENAPIIPISALHGANIDVLVKAIEEFIPTPKRDSNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGIGTKLDPYLTKGDLMAGNVVGKPGKLPPVWTDLRLEVHLLERVV-----GTEQELNVEPIKRKEVLLLNVGTARTMGLVTALGKD 373          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_THEON (Translation initiation factor 2 subunit gamma OS=Thermococcus onnurineus (strain NA1) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.345e-45
Identity = 100/223 (44.84%), Postives = 145/223 (65.02%), Query Frame = 1
Query:   16 INQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            I +++ I +F++GTVA+ AP++PISA    N+DV+   I + IP PE +   PP M+V+RSFDVNKPG + + + GGV GGSI++G LKV   IE+RPG V  +E G IK  PI + IVSL A    ++ A PGGL+GVGT +DP LT+ D + G V+G+ G LP V+ EL +   LL R++     G+E + KV  + ++E+L+LN+G+  T   V  +  D
Sbjct:  156 IERYQEIKEFVKGTVAENAPIIPISALHGANVDVLLAAIEEFIPTPEHDPNKPPKMLVLRSFDVNKPGTKPEKLVGGVIGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGRFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGQLPPVWDELRLEVHLLERVV-----GTEEELKVEPIKRREVLLLNVGTARTMGLVTGLGKD 372          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METJA (Translation initiation factor 2 subunit gamma OS=Methanocaldococcus jannaschii GN=eif2g PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.345e-45
Identity = 100/229 (43.67%), Postives = 147/229 (64.19%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            E  A   +E I +F++GT+A+ AP++PISA  + NIDV+ + I   IP P+R+    P M V RSFD+NKPG E+ D++GGV GG+I++GV KV   IE+RPGI V  E       P+ ++IVSL A    L+ A PGGLIGVGTT+DP LT++D L G V+G  G+LP +  ++ +   LL R++     G++ + K+  L   E+LMLNIG+ +T   + + + D+A
Sbjct:  153 EKQAEENYEQIKEFVKGTIAENAPIIPISAHHEANIDVLLKAIQDFIPTPKRDPDATPRMYVARSFDINKPGTEIKDLKGGVLGGAIIQGVFKVGDEIEIRPGIKV-TEGNKTFWKPLTTKIVSLAAGNTILRKAHPGGLIGVGTTLDPYLTKSDALTGSVVGLPGTLPPIREKITIRANLLDRVV-----GTKEELKIEPLRTGEVLMLNIGTATTAGVITSARGDIA 375          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METVS (Translation initiation factor 2 subunit gamma OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.294e-45
Identity = 98/225 (43.56%), Postives = 144/225 (64.00%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVK 678
            E  A+  +E I KF +GTVA+ AP++P+SA    N+DV+ + I + IP P+R+    P + V RSFDVNKPG E+ D++GGV GGSI++G+LKV   IE+RPG  V  E    K  PI ++I+SL A   +L+ A+PGGLIGVGT +DP LT++D L G + G  G+LPE   ++ +   LL R++     GS+ +  +  L   E+LMLN+G+ +T    ++ K
Sbjct:  153 EEQAVENYEQIQKFTKGTVAEKAPIIPVSAHHGANLDVLLKAIQEFIPTPKRDETVSPRLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGILKVGDEIEIRPGSKVV-EGNKTKWVPIITKIISLGAGSKKLKTALPGGLIGVGTELDPNLTKSDALSGSLAGIPGTLPETLEKITIRPQLLERVV-----GSQDELLIEPLKTNEVLMLNVGTSTTVGVTVSAK 371          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_PYRAB (Translation initiation factor 2 subunit gamma OS=Pyrococcus abyssi GN=eif2g PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.996e-45
Identity = 101/224 (45.09%), Postives = 144/224 (64.29%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A+  +  I +FI+GTVA+ AP++PISA    NIDV+ + I   IP P+R+   PP M+V+RSFDVNKPG   + + GGV GGSI++G LKV   IE+RPG V  +E G IK  PI + IVSL A    ++ A PGGL+GVGT +DP LT+ D + G V+G+ G LP V+  L +   LL R++     G+E++ KV  + ++E+L+LN+G+  T   V  +  D
Sbjct:  156 ALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV-----GTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKD 373          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METAC (Translation initiation factor 2 subunit gamma OS=Methanosarcina acetivorans GN=eif2g PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.913e-45
Identity = 99/229 (43.23%), Postives = 146/229 (63.76%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMST-GARVLAVKND 684
            +E +  N H+ I +F++GTVA+ AP++PISAQ   NIDV+ + +  +IP P      P +M++ RSFD+NKPG  +D+IRGGV GG++  GVL     +E+RPGI V  E G+ K  PI + I S++A   +++ A PGGL+ VGT +DPTLT+ D L GQ+ G  G+LPE   +  +   LL R++GV      R+ K++++   E LMLNIG+ +T G    A KN+
Sbjct:  185 REKLVENYHQ-IKEFVKGTVAENAPIIPISAQQNINIDVLIDALETQIPTPVHKVDKPASMLIARSFDINKPGASIDEIRGGVIGGTLTEGVLHPGDELEIRPGIKVTTE-GSTKWIPIVTTISSIYAGPTKVEEATPGGLLAVGTYLDPTLTKGDSLTGQIAGVPGTLPETRHQFVMELHLLDRVVGV-----TREEKINEIKTSEPLMLNIGTATTVGIVTSARKNE 406          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_ENCCU (Eukaryotic translation initiation factor 2 subunit gamma OS=Encephalitozoon cuniculi GN=ECU01_0700 PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.111e-45
Identity = 100/216 (46.30%), Postives = 142/216 (65.74%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGA 660
            A+ QH+ I KF++ +   G PV+P +AQ+  NI  + ++IV  IP P R+    P MIVIRSFDVN+PG  V ++ GGV GGS++ G+L+V   IE+RPG+V++ +     C P  S IVSL AE  +L  A PGGLIGVGTTMDP+  +AD+LVGQV+G++G LP +F ++ V + L  +      +GS      SKL + E ++LNIGS +TG+
Sbjct:  169 ALEQHDQIQKFLKTSNVSG-PVIPTAAQIGVNIPALLDFIVNYIPEPVRDSTARPKMIVIRSFDVNRPGTRVCEMSGGVIGGSLVTGMLRVGDKIEIRPGLVIR-KGNRFVCRPFVSEIVSLKAESIDLSEAYPGGLIGVGTTMDPSFCKADKLVGQVMGKLGFLPSIFHKITVEYSLFPK---TTIQGS------SKLKEGEHVLLNIGSTTTGS 373          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METMP (Translation initiation factor 2 subunit gamma OS=Methanococcus maripaludis GN=eif2g PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.942e-44
Identity = 96/229 (41.92%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            E  A+  +  I +F +GTVA+ AP++P+SA    N+DV+ + I   IP PER+    P + V RSFDVNKPG E+ D++GGV GGSI++G LKV   +E++PGI V  E       PI ++I+SL     +L+ A PGGLIGVGT +DP LT++D L G + G  G+LPE   ++E+   LL R++     GS+ +  +  L   E+LMLN+G+ +T    ++ + D A
Sbjct:  153 EEAAVENYNQIKEFTKGTVAENAPIIPVSAHHGANLDVLLKAIQDFIPTPERDETVSPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGALKVGDELEIKPGIKV-TEGNKTHWVPIITKIISLGVGSKKLKTAYPGGLIGVGTELDPNLTKSDALSGSLAGIPGTLPETLEKMEIEPQLLERVV-----GSQDELVIEPLKTNEVLMLNVGTSTTVGVTVSARPDRA 375          
The following BLAST results are available for this feature:
BLAST of FC929869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
IF2G_SCHPO1.570e-8668.26Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_YEAST4.276e-8465.65Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_PYRFU6.037e-4644.64Translation initiation factor 2 subunit gamma OS=P... [more]
IF2G_THEON1.345e-4544.84Translation initiation factor 2 subunit gamma OS=T... [more]
IF2G_METJA1.345e-4543.67Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_METVS2.294e-4543.56Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_PYRAB2.996e-4545.09Translation initiation factor 2 subunit gamma OS=P... [more]
IF2G_METAC3.913e-4543.23Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_ENCCU5.111e-4546.30Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_METMP1.942e-4441.92Translation initiation factor 2 subunit gamma OS=M... [more]

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Properties
Property NameValue
Genbank descriptionC34001C11EF PostHarvC1 Citrus clementina cDNA clone C34001C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929869 ID=FC929869; Name=FC929869; organism=Citrus clementina; type=EST; length=692bp
CAGGAAAATGTGGCCATCAACCAACATGAAGCTATCATGAAGTTTATCCA
GGGAACTGTTGCTGATGGCGCACCAGTGGTTCCCATTTCTGCACAGCTAA
AGTACAATATTGATGTTGTATGCGAATATATTGTGAAAAAGATTCCCATT
CCAGAGAGGAACTTTATTGATCCACCAAATATGATTGTAATTCGATCTTT
TGATGTCAATAAACCTGGTTTTGAGGTTGATGATATAAGAGGTGGTGTTG
CTGGTGGCAGCATCCTGAGGGGTGTTCTGAAGGTGAACCAATTTATTGAG
GTTCGTCCCGGTATTGTTGTCAAAGATGAGTCCGGGAACATCAAGTGCAC
ACCTATATACTCGAGAATAGTTTCATTGTTTGCTGAGCAAAATGAGTTAC
AATTTGCAGTTCCAGGAGGTCTCATTGGGGTTGGTACAACCATGGATCCT
ACTTTGACACGGGCGGATAGACTGGTGGGTCAGGTTCTTGGGGAGGTTGG
GTCACTCCCTGAAGTTTTTGTCGAGCTTGAGGTGAACTTCTTTCTATTGC
GCCGGCTTTTGGGTGTGAGGACAAAGGGCTCAGAAAGGCAGGGAAAGGTC
TCCAAACTTGCCAAACAAGAGATTCTTATGCTGAACATAGGATCTATGTC
GACCGGAGCTAGAGTTCTTGCTGTAAAGAATGATTTGGCAAA
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