FC929869

Overview
NameFC929869
Unique NameFC929869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13706 contig Ccv1_Contig13706:776..1467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_ARCFU (Translation initiation factor 2 subunit gamma OS=Archaeoglobus fulgidus GN=eif2g PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.942e-44
Identity = 95/224 (42.41%), Postives = 142/224 (63.39%), Query Frame = 1
Query:   16 INQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +  ++ I +F++GTVA+ AP++PISAQ K N+D + E I + IP PER+   PP M V RSFDVNKPG   + + GGV GGS+ RG ++V   IE+RPG  VKDE GN    P+++ + S+ A    +  A PGGL+G+ T +DPTLT++D LVG V+G  G+LP+V     +   LL R++G+     + + +V K+   E LML +G+  T   V + ++D+
Sbjct:  174 LENYQEIKEFVKGTVAENAPIIPISAQQKVNMDALIEAIEETIPTPERDLDSPPLMHVARSFDVNKPGTPPEKLLGGVLGGSLSRGRIRVGDEIEIRPG--VKDERGN--WNPLFTEVQSIVASGRFVDEATPGGLVGIATKLDPTLTKSDALVGNVVGHPGNLPDVLTSFTMEVNLLERVVGL-----DEEMEVEKIKMNEPLMLAVGTAITLGVVTSARDDI 388          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_PYRHO (Translation initiation factor 2 subunit gamma OS=Pyrococcus horikoshii GN=eif2g PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 99/224 (44.20%), Postives = 144/224 (64.29%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A+  +  I +FI+GTVA+ AP++PISA    NIDV+ + I   IP P+R+   PP M+V+RSFDVNKPG   + + GGV GGSI++G LKV   IE+RPGI   +E G I+  PI + IVSL A    ++ A PGGL+GVGT +DP LT+ D + G V+G+ G LP V+  L +   LL R++     G+E++ +V  + ++E+L+LN+G+  T   V  +  D
Sbjct:  156 ALENYRQIKEFIKGTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGIPY-EEHGRIRYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV-----GTEQELRVEPIKRKEVLLLNVGTARTMGLVTNLGKD 373          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METMA (Translation initiation factor 2 subunit gamma OS=Methanosarcina mazei GN=eif2g PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 96/229 (41.92%), Postives = 145/229 (63.32%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMST-GARVLAVKND 684
            +E +  N H+ I +F++GTVA+ APV+PISAQ   NID++ + +  +IP P      P +M++ RSFD+NKPG  +++IRGGV GG++  GVL     +E+RPGI V  E G+ +  PI + + S++A   ++  A PGGL+ VGT +DPTLT+ D L GQ+ G  G+LPE   +  +   LL R++GV      R+ K++++   E LMLNIG+ +T G    A KN+
Sbjct:  173 REKIIENYHQ-IKEFVKGTVAENAPVIPISAQQNINIDILIDALETQIPTPSHKVDKPASMLIARSFDINKPGASIEEIRGGVIGGTLTEGVLHPGDELEIRPGIKVTTE-GSTRWIPILTTVSSIYAGATKVDEATPGGLLAVGTYLDPTLTKGDSLTGQMAGVPGTLPETRHQFVMELHLLDRVVGV-----TREEKINEIKTSEPLMLNIGTATTVGVVTSARKNE 394          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METM7 (Translation initiation factor 2 subunit gamma OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.650e-44
Identity = 97/229 (42.36%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            E  AI  +  I +F +GTVA+ AP++P+SA    N+DV+ + I + IP PER+    P + V RSFDVNKPG E+ D++GGV GGSI++G LKV   +E+RPGI V  E       PI ++I+SL     +L+ A PGGLIGVGT +DP LT++D L G + G  G+LPE   ++ +   LL R++     GS+ +  +  L   E+LMLN+G+ +T    ++ + D A
Sbjct:  153 EEAAIENYNQIKEFTKGTVAENAPIIPVSAHHGANLDVLLKAIQEFIPTPERDETLTPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGALKVGDDLEIRPGIKV-TEGNKTHWVPIVTKIISLGVGGKKLKSAAPGGLIGVGTELDPNLTKSDALSGSLAGLPGTLPETLEKMVIKPQLLERVV-----GSQDELIIEPLKTNEVLMLNVGTSTTVGVTVSARADKA 375          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METM5 (Translation initiation factor 2 subunit gamma OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.650e-44
Identity = 97/229 (42.36%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            E  AI  +  I +F +GTVA+ AP++P+SA    N+DV+ + I + IP PER+    P + V RSFDVNKPG E+ D++GGV GGSI++G LKV   +E++PGI V  E       PI ++I+SL     +L+ AVPGGLIGVGT +DP LT++D L G + G  G+LPE   ++ +   LL R++     GS+ +  +  L   E+LMLN+G+ +T     + + D A
Sbjct:  153 EEAAIENYNQIKEFTKGTVAENAPIIPVSAHHGANLDVLLKAIQEFIPTPERDETLTPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGALKVGDELEIKPGIKV-TEGNKTHWVPIVTKIISLGVGGKKLKSAVPGGLIGVGTELDPNLTKSDALSGSLAGLPGTLPETLEKMVIKPQLLERVV-----GSQDELVIEPLKTNEVLMLNVGTSTTVGVTASARADKA 375          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_PYRKO (Translation initiation factor 2 subunit gamma OS=Pyrococcus kodakaraensis GN=eif2g PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.380e-44
Identity = 96/223 (43.05%), Postives = 144/223 (64.57%), Query Frame = 1
Query:   16 INQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            + +++ I +F++GTVA+ AP++PISA    N+DV+   I + IP P+R+   PP M+V+RSFDVNKPG   + + GGV GGSI++G L+V   IE+RPG V  +E G IK  PI + I SL A    ++ A PGGL+GVGT +DP LT+ D + G V+G+ G LP V+ EL +   LL R++     G+E + +V  + ++E+L+LN+G+  T   V  +  D
Sbjct:  156 MERYQEIKEFVKGTVAENAPIIPISALHGANVDVLLAAIEEFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVIGGSIVQGKLRVGDEIEIRPG-VPYEEHGRIKYEPITTEITSLQAGGRFVEEAYPGGLVGVGTKLDPFLTKGDLMAGNVVGKPGQLPPVWDELTLEVHLLERVV-----GTEEELRVEPIKRREVLLLNVGTARTMGLVTGLGKD 372          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METM6 (Translation initiation factor 2 subunit gamma OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.644e-43
Identity = 96/229 (41.92%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            E  AI  +  I +F +GTVA+ AP++P+SA    N+DV+ + I + IP P+R+    P + V RSFDVNKPG E+ D++GGV GGSI++G LKV   +E+RPGI V  E       PI ++I+SL     +L+ A PGGLIGVGT +DP LT++D L G + G  G+LPE   ++ +   LL R++     GS+ +  +  L   E+LMLN+G+ +T    ++ + D A
Sbjct:  153 EEAAIENYNQIKEFTKGTVAENAPIIPVSAHHGANLDVLLKAIQEFIPTPKRDETLTPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGALKVGDDLEIRPGIKV-TEGNKTHWVPIITKIISLGVGNKKLKTASPGGLIGVGTELDPNLTKSDALSGSLAGLPGTLPETLEKMVIKPQLLERVV-----GSQDELIIEPLKTNEVLMLNVGTSTTVGVTVSARADKA 375          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_AERPE (Translation initiation factor 2 subunit gamma OS=Aeropyrum pernix GN=eif2g PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.818e-42
Identity = 85/214 (39.72%), Postives = 136/214 (63.55%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMST 654
            A   ++ I+ FI+GT+A+G+P++P+SA  + NID V   I K IP P R+   PP M + RSFDVN+PG   + + GGV GGSI++GV +V   IE+ PG+ V+   G ++   +++ I SL     E++ A PGGL+ +GT +DP++T+AD LVG V+G+ G LPE    L +   LL +++G++      + +V  + + E+LML++G+  T
Sbjct:  159 AKESYQEILNFIKGTIAEGSPIIPVSALKRANIDAVLAAIEKFIPTPPRDLDKPPVMYISRSFDVNRPGTPPERLVGGVVGGSIIQGVFRVGDEIEISPGVAVRKPGGRVEYVRLHTTITSLRFGSIEVEEARPGGLVAIGTQLDPSVTKADNLVGNVVGKPGELPEPLTTLRIEHHLLEKVVGMK-----EEARVEPIRRGEMLMLSVGTAIT 367          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_HALMA (Translation initiation factor 2 subunit gamma OS=Haloarcula marismortui GN=eif2g PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.539e-41
Identity = 94/227 (41.41%), Postives = 141/227 (62.11%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            E  A+  +E I +F++GTVA+GAPVVPISA  + NID++ E +  +IP PER+  +   M+V RSFD+N+PG   DD+ GGV GGS++ G L  +  IE+RPG  V +E G  +  P+ + + SL +  + +    PGGL+GVGT +DP +T+ D L GQV G  GSLP V     ++  LL R++G      +  G+V +++  E LML IG+ +T   V + ++D
Sbjct:  153 EERAMQNYEQIQEFVEGTVAEGAPVVPISAGQEANIDLLIEAVQSEIPTPERDPDEDARMMVARSFDINRPGTTWDDLMGGVLGGSLVGGQLDADDEIELRPGREV-EEGGKTEWQPVTTTVRSLQSGGDFVDTVTPGGLLGVGTGLDPAITKGDALAGQVAGPPGSLPPVHETFTMDVDLLERIVG------DDGGEVDEISTGEPLMLTIGTATTVGSVTSARDD 372          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_HALLT (Translation initiation factor 2 subunit gamma OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.847e-41
Identity = 90/222 (40.54%), Postives = 140/222 (63.06%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVK 678
            A++ +  I +F++GTVA+ AP+VP+SAQ + N+D++ + I  +IP P+R+  +   M   RSFD+N+PG    +++GGV GGS++ G L V   +E+RPG  V DE G  +  P+ + + SL A  N+++ A PGGL+GVGT +DP+LT+ D L GQV GE G+LP    E E+   LL R++G   +G +  G V  +   E LML +G+ +T   V + +
Sbjct:  156 AVDNYRQIQEFVEGTVAEDAPIVPVSAQQEVNMDLLIDAIESEIPTPDRDPGESARMYAARSFDINRPGATAAELKGGVVGGSLVSGELSVGDGLEIRPGREV-DEEGQTEWRPLETTVRSLQAGSNDVESARPGGLLGVGTGLDPSLTKGDALAGQVAGEPGTLPPTRNEFEMQVDLLDRVIG-SEEGDD--GDVEDINTGEPLMLTVGTATTVGAVTSAR 373          
The following BLAST results are available for this feature:
BLAST of FC929869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
IF2G_ARCFU1.942e-4442.41Translation initiation factor 2 subunit gamma OS=A... [more]
IF2G_PYRHO2.536e-4444.20Translation initiation factor 2 subunit gamma OS=P... [more]
IF2G_METMA3.313e-4441.92Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_METM75.650e-4442.36Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_METM55.650e-4442.36Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_PYRKO7.380e-4443.05Translation initiation factor 2 subunit gamma OS=P... [more]
IF2G_METM61.644e-4341.92Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_AERPE1.818e-4239.72Translation initiation factor 2 subunit gamma OS=A... [more]
IF2G_HALMA1.539e-4141.41Translation initiation factor 2 subunit gamma OS=H... [more]
IF2G_HALLT5.847e-4140.54Translation initiation factor 2 subunit gamma OS=H... [more]

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Properties
Property NameValue
Genbank descriptionC34001C11EF PostHarvC1 Citrus clementina cDNA clone C34001C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929869 ID=FC929869; Name=FC929869; organism=Citrus clementina; type=EST; length=692bp
CAGGAAAATGTGGCCATCAACCAACATGAAGCTATCATGAAGTTTATCCA
GGGAACTGTTGCTGATGGCGCACCAGTGGTTCCCATTTCTGCACAGCTAA
AGTACAATATTGATGTTGTATGCGAATATATTGTGAAAAAGATTCCCATT
CCAGAGAGGAACTTTATTGATCCACCAAATATGATTGTAATTCGATCTTT
TGATGTCAATAAACCTGGTTTTGAGGTTGATGATATAAGAGGTGGTGTTG
CTGGTGGCAGCATCCTGAGGGGTGTTCTGAAGGTGAACCAATTTATTGAG
GTTCGTCCCGGTATTGTTGTCAAAGATGAGTCCGGGAACATCAAGTGCAC
ACCTATATACTCGAGAATAGTTTCATTGTTTGCTGAGCAAAATGAGTTAC
AATTTGCAGTTCCAGGAGGTCTCATTGGGGTTGGTACAACCATGGATCCT
ACTTTGACACGGGCGGATAGACTGGTGGGTCAGGTTCTTGGGGAGGTTGG
GTCACTCCCTGAAGTTTTTGTCGAGCTTGAGGTGAACTTCTTTCTATTGC
GCCGGCTTTTGGGTGTGAGGACAAAGGGCTCAGAAAGGCAGGGAAAGGTC
TCCAAACTTGCCAAACAAGAGATTCTTATGCTGAACATAGGATCTATGTC
GACCGGAGCTAGAGTTCTTGCTGTAAAGAATGATTTGGCAAA
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