FC929869

Overview
NameFC929869
Unique NameFC929869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13706 contig Ccv1_Contig13706:776..1467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METTH (Translation initiation factor 2 subunit gamma OS=Methanobacterium thermoautotrophicum GN=eif2g PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.637e-41
Identity = 91/224 (40.62%), Postives = 137/224 (61.16%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A+  +  I +F++GT A+ AP++P+SAQ   NID++ E I ++I  P+R+   P  M V RSFD+NKPG + + + GGV GGS+++G L+V   IE+RPGI VK + G      ++S I  L A   E++   PGGL+GVGT +DP LT+AD L G V GE G+LP V     +   LL R++     G++ + KV  +   E LM+N+G+ +T   V + + D
Sbjct:  154 ALESYREIKEFVKGTCAEDAPIIPVSAQQGANIDILIETIEERIKTPKRDVDKPARMYVARSFDINKPGADPEHLAGGVIGGSLVQGRLRVGDEIEIRPGIQVK-KDGKQTWMSLHSTITGLVAGGEEMEEVGPGGLVGVGTLLDPALTKADSLSGSVAGEPGTLPPVRHSFTMETHLLERVV-----GTKEETKVEPIKTGEPLMINVGTTTTVGVVKSARAD 371          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_METKA (Translation initiation factor 2 subunit gamma OS=Methanopyrus kandleri GN=eif2g PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.701e-40
Identity = 91/227 (40.09%), Postives = 140/227 (61.67%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTV---ADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A   +E I++F++       D  P++P+SAQ K N+DV+ E + +    PE +   P  M + RSFDVNKPG    D++GGV GG+I++G +++   IE+RPGI V +  G  +  P+Y+ +VSL A    ++ A PGGL+G+GT +DPT+T+ADRL GQV GE  +LP V  EL +   LL R++     G+E + KV  +   E+LML +G+ +T   V + ++D
Sbjct:  155 AREHYEQIVQFLEEETHLDPDKTPIIPVSAQHKANLDVLVEAMYEHFEPPEYDLDAPFRMYIARSFDVNKPGTRPSDLKGGVIGGAIVQGEVEIGDEIEIRPGIRV-ERYGRTEWEPVYTEVVSLHANVTPVERARPGGLVGIGTKLDPTMTKADRLSGQVAGEPDTLPPVRHELLLEVELLERVV-----GTEEERKVEPIRTNEVLMLTVGTATTVGVVTSARDD 375          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_HALWD (Translation initiation factor 2 subunit gamma OS=Haloquadratum walsbyi (strain DSM 16790) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.950e-40
Identity = 89/223 (39.91%), Postives = 133/223 (59.64%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKN 681
            AI  H  I  F++GTVA+ AP+VP+SAQ   NID++ + I ++IP PER+    P +   RSFD+N+PG    ++ GGV GGS+ RG L+    IE+RPG  V D+ G ++  PI + + SL A    +    PGGL GVGT +DP+LT+ D L GQ++GE G+LP       +   LL R++G      +  G+V  ++  E LML +G+ +T   V + ++
Sbjct:  156 AIESHNQIQSFVEGTVAEDAPIVPVSAQQAVNIDLLIDAIEREIPTPERDADTSPRLYAARSFDINRPGTTWKNLSGGVIGGSVSRGRLETGAEIELRPGREV-DQGGQVEWQPIITDVRSLQAGGESVSEVTPGGLCGVGTGLDPSLTKGDSLAGQIVGEPGTLPPTRESFTMTVELLDRVVG------DEAGEVETISTGEPLMLTVGTATTVGAVTSARS 371          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_SULSO (Translation initiation factor 2 subunit gamma OS=Sulfolobus solfataricus GN=eif2g PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 88/224 (39.29%), Postives = 142/224 (63.39%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A++Q+  I +F +GT A+  P++P+SA  K NID + E I + I  P R+    P M+VIRSFDVNKPG + ++++GGV GGSI++G+ KV+Q I+V PG+ V ++ G +   PI+++I S+     E + A PGGL+ +GT +DP+LT+AD L+G ++    +   V   + + + LL R++     G++   KV  +  +E LML++GS +T   V +VK D
Sbjct:  159 ALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRV-EKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLTKADNLLGSIITLADAEVPVLWNIRIKYNLLERVV-----GAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKKD 376          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_META3 (Translation initiation factor 2 subunit gamma OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39
Identity = 89/229 (38.86%), Postives = 136/229 (59.39%), Query Frame = 1
Query:    4 ENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            E  A   +  I +F++ TVA+ AP++PISA    NID++   I   +P PE +   P  + V RSFD+NKPG E+  ++GGV GGSI++G L   + IE++PG+ +  E   I+   I ++I SL      ++ A PGGL+G+GT +DP LT++D L G V G  G+LPE   E+ V   LL R++     GS+ +  +S L   E LMLN+G+ +T   + + + D+A
Sbjct:  153 EERAKESYNEIKEFVKDTVAEKAPIIPISAHHGANIDILLNAIEDLMPTPEMDEGAPARLYVARSFDINKPGCEISKLKGGVIGGSIIQGTLNSGEKIEIKPGLKIV-EGNKIRWESIITKITSLGVGGKTVKVAHPGGLVGIGTELDPALTKSDSLSGCVAGAPGTLPETLSEITVQTKLLDRIV-----GSDEELIISPLKSNEALMLNVGTATTVGIITSARGDMA 375          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_SULTO (Translation initiation factor 2 subunit gamma OS=Sulfolobus tokodaii GN=eif2g PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.208e-39
Identity = 89/226 (39.38%), Postives = 142/226 (62.83%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSL-PEVFVELEV-NFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A+ Q++ I +F++GT A+ AP++P+SA  K NID + E I K IP P+R+    P M+VIRSFDVNKPG   ++++GGV GGSI++G L++   I++ PG+  +   G ++  P+Y+ I S+     E++ A PGGL+ +GT +DP+  +AD LVG V+ +  +    V   L++ N+ LL R++     G++   KV  + K E+LML +GS +T      +KND
Sbjct:  163 ALKQYKQIKEFLKGTWAEDAPIIPVSALHKINIDALIEGIQKYIPTPQRDLSKDPIMLVIRSFDVNKPGTPYNELKGGVIGGSIIQGKLEIGDEIKILPGLRHEKPGGKVEYEPLYTTITSIRFSDLEVKEAKPGGLVALGTELDPSYVKADSLVGSVVVKSSNKNVSVLWNLKIENYQLLERVV-----GAKELVKVENIKKGEVLMLTLGSATTLGVAKNIKND 383          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_NATPD (Translation initiation factor 2 subunit gamma OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.348e-37
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKND 684
            A++ +EAI +F+ GTVA+ APVVPISAQ   N+D++ + I  +IP P+R+      + V RSFD+N+PG   +D+ GGV GGS+ +G L+ +  IE++PG  + +E G  +  P+ + + SL A    +    PGGL+GVGT +DP+LT+ D L GQV G  GSLP       ++  LL R++G      E   ++  ++  E LML +G+ +T   V + ++D
Sbjct:  156 ALDNYEAIEEFVDGTVAEDAPVVPISAQQDVNMDLLMQTIESEIPTPDRDPDADARLQVARSFDINRPGTTWEDLTGGVLGGSLTQGQLEADDDIEIKPGREI-EEGGQSEYQPVETTVRSLQAGGEFVDTVTPGGLLGVGTGLDPSLTKGDALAGQVAGPPGSLPPTRESFTMDVELLDRVVG------EDAEEIEPISTGEPLMLTVGTATTVGSVTSARDD 372          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_HALSA (Translation initiation factor 2 subunit gamma OS=Halobacterium salinarium GN=eif2g PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36
Identity = 86/223 (38.57%), Postives = 134/223 (60.09%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKN 681
            A   +E I  F++GTVA+ APVVP+SA+ + N+D+V + +  +I  P+R+    P +   RSFD+N+PG E   + GGV GGS++ G L+    +E+RPG  V +E G  +  P+ + + SL A   ++  A PGGL+GVGT +DP+LT+ D L GQV G  GSLP  +   E++  LL RL+G    G +    +  ++  E LML +G+ +T   V + ++
Sbjct:  157 ARQNYEEIQAFVEGTVAEDAPVVPVSAEQEINVDLVIDALQTEIATPDRDPSADPLLYAARSFDINRPGTEWGGLLGGVIGGSLVDGELEAGDELELRPGREV-EEGGKTEWRPVTTDVRSLQAGGEDVDSASPGGLLGVGTGLDPSLTKGDALAGQVAGPPGSLPPTWESFEMDVDLLERLVGA-ADGEQ----IDDISTGEPLMLTVGTATTVGSVTSARD 373          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_HALS3 (Translation initiation factor 2 subunit gamma OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36
Identity = 86/223 (38.57%), Postives = 134/223 (60.09%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKN 681
            A   +E I  F++GTVA+ APVVP+SA+ + N+D+V + +  +I  P+R+    P +   RSFD+N+PG E   + GGV GGS++ G L+    +E+RPG  V +E G  +  P+ + + SL A   ++  A PGGL+GVGT +DP+LT+ D L GQV G  GSLP  +   E++  LL RL+G    G +    +  ++  E LML +G+ +T   V + ++
Sbjct:  157 ARQNYEEIQAFVEGTVAEDAPVVPVSAEQEINVDLVIDALQTEIATPDRDPSADPLLYAARSFDINRPGTEWGGLLGGVIGGSLVDGELEAGDELELRPGREV-EEGGKTEWRPVTTDVRSLQAGGEDVDSASPGGLLGVGTGLDPSLTKGDALAGQVAGPPGSLPPTWESFEMDVDLLERLVGA-ADGEQ----IDDISTGEPLMLTVGTATTVGSVTSARD 373          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_THEVO (Translation initiation factor 2 subunit gamma OS=Thermoplasma volcanium GN=eif2g PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.490e-36
Identity = 83/223 (37.22%), Postives = 130/223 (58.30%), Query Frame = 1
Query:   13 AINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGN-IKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVK 678
            A+  ++ I  F++G++A+ AP++P+SA    NID++ E I K IP PE N    P M + RSFDVNKPG  +D I+GG+ GGS+ +G LK+   IE+ PGI  ++  GN    T + + +VSL A +       PGGL  VGT +DP LT+ D   G++ G +G +P +   + +   LL+R++     GS+++  V  +  +E LM  + + +T   V  VK
Sbjct:  154 ALESYKEIKAFVKGSIAENAPIIPVSAYHNTNIDILFEAIEKYIPTPEYNEGSDPIMYIARSFDVNKPGTPIDQIKGGIIGGSLTQGSLKIGDEIEIVPGI--QNTRGNKTVWTNVTTEVVSLMAGKYSYDMIKPGGLAAVGTKLDPFLTKGDAFTGRIAGYIGKVPPISFSMRLEAHLLKRVV-----GSDQELNVEPIRAKETLMFTVATANTVGVVSNVK 369          
The following BLAST results are available for this feature:
BLAST of FC929869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
IF2G_METTH7.637e-4140.63Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_METKA1.701e-4040.09Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_HALWD4.950e-4039.91Translation initiation factor 2 subunit gamma OS=H... [more]
IF2G_SULSO6.465e-4039.29Translation initiation factor 2 subunit gamma OS=S... [more]
IF2G_META32.457e-3938.86Translation initiation factor 2 subunit gamma OS=M... [more]
IF2G_SULTO3.208e-3939.38Translation initiation factor 2 subunit gamma OS=S... [more]
IF2G_NATPD1.348e-3738.84Translation initiation factor 2 subunit gamma OS=N... [more]
IF2G_HALSA1.141e-3638.57Translation initiation factor 2 subunit gamma OS=H... [more]
IF2G_HALS31.141e-3638.57Translation initiation factor 2 subunit gamma OS=H... [more]
IF2G_THEVO1.490e-3637.22Translation initiation factor 2 subunit gamma OS=T... [more]

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Properties
Property NameValue
Genbank descriptionC34001C11EF PostHarvC1 Citrus clementina cDNA clone C34001C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929869 ID=FC929869; Name=FC929869; organism=Citrus clementina; type=EST; length=692bp
CAGGAAAATGTGGCCATCAACCAACATGAAGCTATCATGAAGTTTATCCA
GGGAACTGTTGCTGATGGCGCACCAGTGGTTCCCATTTCTGCACAGCTAA
AGTACAATATTGATGTTGTATGCGAATATATTGTGAAAAAGATTCCCATT
CCAGAGAGGAACTTTATTGATCCACCAAATATGATTGTAATTCGATCTTT
TGATGTCAATAAACCTGGTTTTGAGGTTGATGATATAAGAGGTGGTGTTG
CTGGTGGCAGCATCCTGAGGGGTGTTCTGAAGGTGAACCAATTTATTGAG
GTTCGTCCCGGTATTGTTGTCAAAGATGAGTCCGGGAACATCAAGTGCAC
ACCTATATACTCGAGAATAGTTTCATTGTTTGCTGAGCAAAATGAGTTAC
AATTTGCAGTTCCAGGAGGTCTCATTGGGGTTGGTACAACCATGGATCCT
ACTTTGACACGGGCGGATAGACTGGTGGGTCAGGTTCTTGGGGAGGTTGG
GTCACTCCCTGAAGTTTTTGTCGAGCTTGAGGTGAACTTCTTTCTATTGC
GCCGGCTTTTGGGTGTGAGGACAAAGGGCTCAGAAAGGCAGGGAAAGGTC
TCCAAACTTGCCAAACAAGAGATTCTTATGCTGAACATAGGATCTATGTC
GACCGGAGCTAGAGTTCTTGCTGTAAAGAATGATTTGGCAAA
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