FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.913e-38
Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = 2
Query:   83 WRRRKYENNVQDSSTSET------NLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            WRR+K +++  D    E        L+ FS  EL+ A+  F  K  LGRG FG VYKG L  A G  +AVK+L +   Q  E +F++EV  I    H+NL++L GFC     RLLVY +M NG++A+ +   P+     DW  R RI+L  ARGL YLH+ C+  IIH D+K  NILLD  F A + DFGL+KL+    +   T +RGT G++APE++    S  K
Sbjct:  249 WRRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL--ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 472          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.489e-38
Identity = 83/195 (42.56%), Postives = 128/195 (65.64%), Query Frame = 2
Query:  149 FSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSD-----QSRTHTMIRGTRGYVAPEWVQMH 706
            +++ EL  AT  F +  ++GRG +G VYKG L    G  +AVK+ ++ + + ++EF +E+  + R HH+NLV LLG+CD+   ++LVYE+M NG+L + + A  +   +L  R+RI+L  ARG++YLH E + PIIH DIKP NILLD+  + K++DFG+SKL+  D     +    T+++GT GYV PE+   H
Sbjct:  619 YNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPG--GLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSH 811          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.489e-38
Identity = 93/212 (43.87%), Postives = 133/212 (62.74%), Query Frame = 2
Query:   89 RRKYE--NNVQDSSTSETNLRLFSYNELKEATG--GFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQ 700
            R+ Y   N  Q     ++ LR F +  +  AT    F+ ++G+G FG VYKG  K   G+ IAVK+L R + + E EF++EV  + R  H+NLV+LLGFC+E    +LVYEF+ N +L + IF   K     W++R RI   +ARGLVYLHE+  + IIH D+K  NILLD Y + K++DFG+++L   DQ+R  T  + GT GY+APE+V+
Sbjct:  306 RKSYNGINEAQYDYGGQSKLR-FDFRMILTATDDFSFENKIGQGGFGSVYKG--KLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVR 514          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.475e-38
Identity = 90/215 (41.86%), Postives = 132/215 (61.40%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW-VQMHLSQ 715
            +RRK   + ++  + +     F+Y+ELK AT  F    +LG G FG VYKG L    G+ +AVK L   +++ + +F +E+ AI    H+NLV+L G C E  +RLLVYE++ NG+L   +F       DW+ R  I L +ARGLVYLHEE  + I+H D+K  NILLD+    K+SDFGL+KL    ++   T + GT GY+APE+ ++ HL++
Sbjct:  660 KRRKRYTDDEEILSMDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLND--GREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTE 872          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.475e-38
Identity = 87/211 (41.23%), Postives = 132/211 (62.56%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQ 700
            RR+ Y+ +  D +   T+   F +  +++AT  F E   +GRG FG V+ GVL   +G  +A+K+L + +++  REFK+EV  + + HH+NLV+LLGFC E   ++LVYEF+ N +L   +F   K    DW  R  I   I RG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQS  +T  I GTRGY+ PE+V+
Sbjct:  306 RRKSYQGSSTDITI--THSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL---NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVR 511          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.446e-37
Identity = 93/214 (43.46%), Postives = 134/214 (62.62%), Query Frame = 2
Query:   86 RRRKYEN-NVQDSSTSETN---LRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            R+  Y   NV  +  S+++   +  F    +  AT  F  E  LG+G FG VYKG L   +G+ +AVK+L + + + + EFK+EVS + R  H+NLV+LLGFC+E   ++LVYEF+ N +L + IF   K     W +R RI   IARGL+YLHE+  + IIH D+K  NILLD   + K++DFG ++L  SD++R  T  I GTRGY+APE++
Sbjct:  316 RKESYNKINVGSAEYSDSDGQFMLRFDLGMVLAATDEFSSENTLGQGGFGTVYKGTL--LNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYL 527          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.888e-37
Identity = 91/206 (44.17%), Postives = 133/206 (64.56%), Query Frame = 2
Query:  128 SETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVL--------KSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD-----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEWV 697
            S T ++ FS+NELK AT  F+ +  +G G FG V++G L        KS+SG  IAVK+L+    +  RE+ +E++ +G+  H NLV+L+G+C E   RLLVYEFM  G+L N +FA    D     W LR++++L+ A+GL +LH +  V +I+ DIK  NILLD+ F+AK+SDFGL++   + +QS   T + GT GY APE+V
Sbjct:   42 SSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYV 246          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.888e-37
Identity = 100/229 (43.67%), Postives = 130/229 (56.77%), Query Frame = 2
Query:   83 WRRRKYENNVQDSSTSET------NLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER----EREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            WRRRK  +   D    E        L+ FS  EL+ A+ GF  K  LGRG FG VYKG L  A G  +AVK   RL +ER    E +F++EV  I    H+NL++L GFC     RLLVY +M NG++A+ +   P      DW  R RI+L  ARGL YLH+ C+  IIH D+K  NILLD  F A + DFGL+KL+    +   T +RGT G++APE++    S  K
Sbjct:  262 WRRRKPLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRL--ADGTLVAVK---RLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 485          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.466e-37
Identity = 87/188 (46.28%), Postives = 115/188 (61.17%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            F+  ++K AT  F  E  +G G FG VYKGVL  A G  IAVK+L   +++  REF +E+  I    H NLV+L G C E    LLVYE++ N +LA  +F   K     DW+ R +I + IA+GL YLHEE  + I+H DIK  N+LLD   +AKISDFGL+KL   + +   T I GT GY+APE+
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVL--ADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEY 842          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.466e-37
Identity = 90/215 (41.86%), Postives = 133/215 (61.86%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW-VQMHLSQ 715
            +RRK   + ++    +    +F+Y+ELK AT  F    +LG G FG VYKG L    G+ +AVK L   +++ + +F +E+ AI    H+NLV+L G C E  +R+LVYE++ NG+L   +F       DW+ R  I L +ARGLVYLHEE +V I+H D+K  NILLD+    +ISDFGL+KL    ++   T + GT GY+APE+ ++ HL++
Sbjct:  661 KRRKRYTDDEELLGMDVKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLND--GRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTE 873          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BAK1_ARATH2.913e-3842.48BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5374_ARATH6.489e-3842.56Probable LRR receptor-like serine/threonine-protei... [more]
CRK38_ARATH6.489e-3843.87Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
Y5614_ARATH8.475e-3841.86Probable LRR receptor-like serine/threonine-protei... [more]
CRK14_ARATH8.475e-3841.23Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK39_ARATH1.446e-3743.46Putative cysteine-rich receptor-like protein kinas... [more]
Y3545_ARATH1.888e-3744.17Probable receptor-like protein kinase At3g55450 OS... [more]
SERK1_ARATH1.888e-3743.67Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
Y5343_ARATH2.466e-3746.28Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH2.466e-3741.86Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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