FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33
Identity = 81/203 (39.90%), Postives = 121/203 (59.61%), Query Frame = 2
Query:  122 STSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-------DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWVQ 700
            +T +  LR   +++L EAT GF     +G G FG V+K  LK   G ++A+KKL RL+ + +REF +E+  +G+  H+NLV LLG+C     RLLVYEFM  G+L  ++   P+         W  R +I+   A+GL +LH  C   IIH D+K  N+LLD    A++SDFG+++L+ + D   + + + GT GYV PE+ Q
Sbjct:  817 ATFQRQLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKD--GSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHG-PRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQ 1016          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.685e-33
Identity = 81/203 (39.90%), Postives = 121/203 (59.61%), Query Frame = 2
Query:  128 SETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            S  ++++F+   +KEAT G+ E   LG+G  G VYKG+L   S   +A+KK       +  +F +EV  + + +H+N+V+LLG C E    LLVYEF+ +GTL + +          W  R+R+++EIA  L YLH   ++PIIH DIK  NILLD   +AK++DFG S+L+  D+    TM++GT GY+ PE+    L   K
Sbjct:  391 SNVDVKIFTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNS--IVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEK 591          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33
Identity = 85/187 (45.45%), Postives = 112/187 (59.89%), Query Frame = 2
Query:  140 LRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPK--PDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRGYVAPE 691
            L +++Y ELK+ T  F   +G+G FG VY G L  ++G+ +AVK L  L    E +F +EV+++ +T H N+V LLGFC E   R +VYEF+ NG+L   +        D      I+L IARGL YLH  C   I+H DIKPQNILLD     K+SDFGL+KL    +S    M  RGT GY+APE
Sbjct:  485 LNMYTYAELKKITKSFSYIIGKGGFGTVYGGNL--SNGRKVAVKVLKDLKGSAE-DFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQDVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGTIGYIAPE 668          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33
Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 2
Query:  131 ETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRGYVAPEWVQMHLSQPK 721
            E  L L     + +AT  F    +LG+G FGIVYKG L    GK IAVK+L + + +   EF +EV+ I R  H NLVQ+LG C E   ++L+YE++ N +L + +F      K +WN R  I+  +ARGL+YLH++    IIH D+K  NILLD     KISDFG++++   D++  +TM + GT GY++PE+    +   K
Sbjct:  510 ELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRL--LDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEK 710          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33
Identity = 78/196 (39.80%), Postives = 124/196 (63.27%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE--REFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP-----KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI-RGTRGYVAPEWVQMH 706
            FSY EL++ATGGF E+  +G+GSF  V+KG+L+   G  +AVK+  + +  ++  +EF +E+  + R +H +L+ LLG+C++   RLLVYEFM +G+L   +         + +W  RV I+++ ARG+ YLH     P+IH DIK  NIL+D   +A+++DFGLS L  +D     + +  GT GY+ PE+ ++H
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRD--GTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLH 686          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33
Identity = 81/190 (42.63%), Postives = 117/190 (61.58%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            R+F+  EL++AT  F E   LG G  G VYKG+L    G+ +AVKK   + +++ +EF +EV  + + +H+++V+LLG C E    +LVYEF+ NG L   I      D    W +R+RI+++IA  L YLH   + PI H DIK  NILLD  + AK++DFG S+ +  DQ+   T+I GT GYV PE+
Sbjct:  430 RIFTSKELEKATENFSENRVLGHGGQGTVYKGML--VDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEY 617          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33
Identity = 84/212 (39.62%), Postives = 122/212 (57.55%), Query Frame = 2
Query:   80 KWRRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            K +  + E NV+ S       ++FS NEL++AT  F     LG+G  G VYKG+L    G+ +AVK+   + +++  EF +EV  + + +H+N+V+LLG C E    +LVYEF+ NG L   +          W +R+ I++EIA  L YLH   + PI H DIK  NILLD  +  K+SDFG S+ +  DQ+   T + GT GYV PE+ Q
Sbjct:  396 KQQLARKEGNVEMS-------KIFSSNELEKATDNFNTNRVLGQGGQGTVYKGML--VDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQ 598          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33
Identity = 79/186 (42.47%), Postives = 112/186 (60.22%), Query Frame = 2
Query:  161 ELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            ++ EAT  F ++  +G G FG VYK  L     K +AVKKL     +  REF +E+  +G+  H NLV LLG+C  +  +LLVYE+M NG+L     N    +   DW+ R++I++  ARGL +LH      IIH DIK  NILLD  F  K++DFGL++L+ + +S   T+I GT GY+ PE+ Q
Sbjct:  909 DIVEATDHFSKKNIIGDGGFGTVYKACLPGE--KTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQ 1092          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.209e-33
Identity = 81/203 (39.90%), Postives = 120/203 (59.11%), Query Frame = 2
Query:  107 NVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            NVQ S       ++FS  EL++AT  F     LG+G  G VYKG+L    G+ +AVK+   L +++  EF +EV  + + +H+N+V+L+G C E    +LVYE + NG L   +          W++R+RIS+EIA  L YLH   + P+ H D+K  NILLD  + AK+SDFG S+ +  DQ+   T++ GT GY+ PE+ Q
Sbjct:  402 NVQSS-------KIFSSKELEKATDNFNMNRVLGQGGQGTVYKGML--VDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQ 595          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32
Identity = 75/196 (38.27%), Postives = 115/196 (58.67%), Query Frame = 2
Query:  152 SYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLA----NLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            S +++ ++T  F +   +G G FG+VYK  L    G  +A+K+L     + +REF++EV  + R  H NLV LLG+C+   ++LL+Y +M NG+L       +   P  DW  R+RI+   A GL YLH+ C   I+H DIK  NILL + F A ++DFGL++L+L   +   T + GT GY+ PE+ Q  ++  K
Sbjct:  732 SLDDILKSTSSFNQANIIGCGGFGLVYKATLPD--GTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYK 925          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRL2_ARATH2.821e-3339.90Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
WAK4_ARATH3.685e-3339.90Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y5393_ARATH4.812e-3345.45Probable receptor-like protein kinase At5g39030 OS... [more]
SRK6_BRAOE4.812e-3340.89Putative serine/threonine-protein kinase receptor ... [more]
CRI4_MAIZE4.812e-3339.80Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLM_ARATH6.285e-3342.63Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLD_ARATH6.285e-3339.62Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
EXS_ARATH6.285e-3342.47Leucine-rich repeat receptor protein kinase EXS OS... [more]
WAKLI_ARATH8.209e-3339.90Wall-associated receptor kinase-like 22 OS=Arabido... [more]
PSKR1_DAUCA1.072e-3238.27Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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