FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 2
Query:  134 TNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEW 694
            T  R  +Y E+ + T  F+  LG+G FG VY G L    G  +AVK L   + +  +EFK+EV  + R HH++LV L+G+CD+  N  L+YE+M NG L   +      +   W  R++I++E A+GL YLH  C  P++H D+K  NILL+    AK++DFGLS+   +  +    T++ GT GY+ PE+
Sbjct:  569 TRERKITYPEVLKMTNNFERVLGKGGFGTVYHGNL---DGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEY 756          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 75/174 (43.10%), Postives = 112/174 (64.37%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQMH 706
            LG+G FG V+KGVL+   G  IAVK+L + + +  +EF++E S + +  H+NLV +LGFC E   ++LVYEF+ N +L   +F   K    DW  R +I +  ARG++YLH +  + IIH D+K  NILLD     K++DFG++++   DQSR  T  + GT GY++PE++ MH
Sbjct:  327 LGQGGFGEVFKGVLQD--GSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYL-MH 497          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 84/210 (40.00%), Postives = 126/210 (60.00%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            R++K E ++   S        F    ++ AT  F E  +LG+G FG VYKG+L +  G  IAVK+L + + + E EFK+EV  + +  H NLV+LLGF  +   +LLVYEF+ N +L   +F   K    DW +R  I   I RG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQ+  +T  + GT GY++PE+V
Sbjct:  312 RKQKQEMDLPTESVQ------FDLKTIESATSNFSERNKLGKGGFGEVYKGMLMN--GTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFDPTKRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYV 513          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 87/209 (41.63%), Postives = 124/209 (59.33%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRL--FSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPK--PDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRGYVAPEWV 697
            R+ K + N +++S     L L  + Y ELK+ T  F   +G+G FG VY+G L  ++G+ +AVK L  L    + +F +EV+++ +T H N+V LLGFC E   R ++ EF+ +G+L   I       P+      I+L IARGL YLH  C   I+H DIKPQNILLD+ F  K++DFGL+KL    +S    +  RGT GY+APE V
Sbjct:  463 RQMKRKKNKKENSVIMFKLLLKQYIYAELKKITKSFSHTVGKGGFGTVYRGNL--SNGRTVAVKVLKDLKGNGD-DFINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFISRNKSLTPNVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVV 668          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLD-------------RLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD--WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ-SRTHTMIRGTRGYVAPEW 694
            R F+Y+E+   T  F + +G+G FGIVY G L+   G  IAVK ++               + +  +EF+ E   +   HH+NL   +G+CD+  +  L+YE+M NG L + + +    D  W  R+ I+++ A+GL YLH  C  PI+H D+K  NILL++   AKI+DFGLSK+   D  S   T + GT GYV PE+
Sbjct:  555 RRFTYSEVSSITNNFNKVIGKGGFGIVYLGSLED--GTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEY 752          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 78/189 (41.27%), Postives = 110/189 (58.20%), Query Frame = 2
Query:  152 SYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            S  EL ++T  F +   +G G FG+VYK       G   AVK+L     + EREF++EV A+ R  HKNLV L G+C    +RLL+Y FM NG+L   +      +    W++R++I+   ARGL YLH+ C   +IH D+K  NILLD  F A ++DFGL++LL    +   T + GT GY+ PE+ Q
Sbjct:  743 SVEELLKSTNNFSQANIIGCGGFGLVYKA--NFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQ 929          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 85/211 (40.28%), Postives = 127/211 (60.19%), Query Frame = 2
Query:   86 RRRKYENNVQ-DSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            +RRK +  ++     +E     F    ++ ATG F E  +LG G FG VYKG+L   +G  IAVK+L + + + E EFK+EV  + +  H NLV+LLGF  +   +LLVYEF+ N +L   +F   K    DW +R  I   I RG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQ+  +T  + GT GY++PE+V
Sbjct:  325 KRRKQKQEIELPIVLNEAESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGML--LNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYV 533          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32
Identity = 82/199 (41.21%), Postives = 126/199 (63.32%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            D  T+E+ L+L  Y  ++ AT  F E  ++G+G FG VYKG    ++G  +AVK+L + + + + EFK+EV  + +  H+NLV+LLGF      R+LVYE+M N +L   +F   K    DW  R ++   IARG++YLH++  + IIH D+K  NILLD   + K++DFGL+++   DQ++ +T  I GT GY+APE+
Sbjct:  316 DDITTES-LQL-DYRMIRAATNKFSENNKIGQGGFGEVYKGTF--SNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEY 510          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 81/214 (37.85%), Postives = 124/214 (57.94%), Query Frame = 2
Query:   89 RRKYENNVQDSSTSETNLRL--FSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP------DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            R+KY+    +++   T +    F   +++ AT  F    ++G+G FG VYKG L  ++G  +AVK+L R + + E EFK+EV  + +  H+NLV+LLGF  +   ++LV+EF+ N +L   +F    P      DW  R  I   I RGL+YLH++  + IIH DIK  NILLD   + KI+DFG+++     Q+   T  + GT GY+ PE+V
Sbjct:  312 RKKYQAFASETADDITTVGYLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTL--SNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYV 523          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 81/204 (39.71%), Postives = 120/204 (58.82%), Query Frame = 2
Query:  104 NNVQDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            ++  D  T+ +    F +  +K AT  F +  +LG G FG VYKG+  +  G  +A K+L + + + E EFK+EV  + R  HKNLV LLGF  E   ++LVYEF+ N +L + +F   K    DW  R  I   I RG++YLH++  + IIH D+K  NILLD   + KI+DFGL++    +Q+  +T  + GT GY+ PE+V
Sbjct:  336 DDATDDLTASSGSLRFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPN--GTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYV 537          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1518_ARATH1.400e-3239.27Probable LRR receptor-like serine/threonine-protei... [more]
CRK33_ARATH1.400e-3243.10Putative cysteine-rich receptor-like protein kinas... [more]
CRK18_ARATH1.400e-3240.00Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y5392_ARATH1.829e-3241.63Probable receptor-like protein kinase At5g39020 OS... [more]
Y4291_ARATH1.829e-3238.00Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH1.829e-3241.27Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
CRK17_ARATH1.829e-3240.28Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK15_ARATH2.388e-3241.21Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK30_ARATH3.119e-3237.85Putative cysteine-rich receptor-like protein kinas... [more]
CRK21_ARATH3.119e-3239.71Cysteine-rich receptor-like protein kinase 21 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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