FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 77/210 (36.67%), Postives = 124/210 (59.05%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            RR+ Y+    ++  + +    F +  ++ AT  F++  +LG G FG V+KG   +  G  +AVK+L +++ + E EFK+EV  + +  H+NLV+LLGF  E   ++LVYE+M N +L   +F   +    DW  R  I   + RG++YLH++  + IIH D+K  NILLD   + KI+DFG+++    DQ+   T  + GT GY+ PE+V
Sbjct:  302 RRKAYQEFATENDITTSGSLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPN--GTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYV 509          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 81/189 (42.86%), Postives = 113/189 (59.79%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKEEL--GRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEW 694
            R F+  E++ AT  F + L  G G FG VY+G L+   G  IA+K+    +Q+   EF++E+  + R  H++LV L+GFCDE    +LVYE+M NGTL + +F   +P   W  R+   +  ARGL YLH      IIH D+K  NILLD  F AK+SDFGLSK   S D +   T ++G+ GY+ PE+
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELED--GTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEY 692          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 78/205 (38.05%), Postives = 125/205 (60.98%), Query Frame = 2
Query:  122 STSETNLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ-MHLS 712
            +   +++  F Y E+++AT GF  K++LG G++G VY+G L++   + +A+K+L     E   +  +E+  +    H NLV+LLG C E  + +LVYE+M NGTL+  +       +P   W LR+ ++ + A+ + YLH   N PI H DIK  NILLD  F++K++DFGLS+L +++ S   T  +GT GY+ P++ Q  HLS
Sbjct:  327 AAGNSSVAFFPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQN--DEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLP---WTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLS 526          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 78/202 (38.61%), Postives = 121/202 (59.90%), Query Frame = 2
Query:  113 QDSSTSETNL---RLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            Q  +T + N+   ++FS  EL++AT  F  +  LG+G  G VYKG+L    G  +AVK+   + +++  EF +E+  + + +H+N+V+LLG C E    +LVYE++ NG L   +          W +R+RI++EIA  L Y+H   + PI H DIK  NILLD  + AK+SDFG S+ +  DQ+   T++ GT GY+ PE+
Sbjct:  402 QQLTTKDGNVEMSKIFSSKELRKATDNFSIDRVLGQGGQGTVYKGML--VDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEY 601          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32
Identity = 83/202 (41.09%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  113 QDSSTSETNL---RLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            Q  +T++ N+   R+FS  EL++AT  F E   LG+G  G VYKG+L    G+ +AVKK   + +++  EF +EV  + + +H+++V+LLG C E     LVYEF+ NG L   I          W +R+RI+++IA  L YLH   + PI H DIK  NILLD  +  K+SDFG S+ +  D +   T+I GT GYV PE+
Sbjct:  424 QQLNTNKGNVEKTRIFSSRELEKATDNFSESRILGQGGQGTVYKGML--VDGRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEY 623          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32
Identity = 77/191 (40.31%), Postives = 116/191 (60.73%), Query Frame = 2
Query:  146 LFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            +FS  EL++AT  F     LG+G  G VYKG+L    G+ +AVKK   + +++  EF +EV  + + +H+N+V+LLG C E    +LVYEF+ NG L   +      +    WN+R+RI+++IA  L YLH   + PI H D+K  NI+LD  + AK+SDFG S+ +  D +   T++ GT GY+ PE+ Q
Sbjct:  434 VFSSRELEKATENFSSNRILGQGGQGTVYKGML--VDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQ 622          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32
Identity = 79/212 (37.26%), Postives = 119/212 (56.13%), Query Frame = 2
Query:   92 RKYENNVQDSSTSETNLRLF-------SYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            RK++ N Q        +++F       +Y  +  ATG F     +G G FG  YK  +   +    AVK+L     + +++F +E+SA+    H NLV L+G+        L+Y ++  G L + I    K   +W +  +I+L++AR L YLHE+C+  ++H DIKP NILLDN ++A +SDFGLSKLL + QS   T + GT GYVAPE+
Sbjct:  223 RKWKRNSQVQVDEIKEIKVFVDIGIPLTYEIIVRATGYFSNSNCIGHGGFGSTYKAEVSPTN--VFAVKRLSVGRFQGDQQFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEY 432          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32
Identity = 85/216 (39.35%), Postives = 126/216 (58.33%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSE---TNLRLFSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQMH 706
            +RR+ +  +++++ +E   T+   F +  ++ AT  F    ++G G FG+VYKG L    G  IAVK+L   + +   EFK+EV  + +  HKNLV+L GF  +   RLLVYEF+ N +L   +F   K    DW  R  I + ++RGL+YLHE    PIIH D+K  N+LLD     KISDFG+++    D ++  T  + GT GY+APE+  MH
Sbjct:  297 KRRRKKKTLKENAENEFESTDSLHFDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPD--GLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYA-MH 509          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 2
Query:  128 SETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            S    ++FS N+L+ AT  F     LG+G  G VYKG+L+   G  +AVKK   L +E   EF +E+  + + +H+N+V++LG C E    +LVYEF+ N  L + +   P  D    W +R+ I+ E+A  L YLH   ++PI H D+K  NILLD    AK+SDFG+S+ +  D +   T+++GT GYV PE++Q
Sbjct:  371 SVNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLED--GMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHN-PSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQ 564          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 75/197 (38.07%), Postives = 117/197 (59.39%), Query Frame = 2
Query:  119 SSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD--WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKL-LLSDQSRTHTMIRGTRGYVAPEW 694
            SS      R FS+ E+K AT  F E   LG G FG VY+G +   + K +A+K+ + ++++   EF++E+  + +  H++LV L+G+C+E    +LVY++M +GT+   ++    P   W  R+ I +  ARGL YLH      IIH D+K  NILLD  + AK+SDFGLSK     D +   T+++G+ GY+ PE+
Sbjct:  514 SSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTK-VAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEY 709          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK16_ARATH3.119e-3236.67Putative cysteine-rich receptor-like protein kinas... [more]
Y1357_ARATH4.074e-3242.86Probable receptor-like protein kinase At1g30570 OS... [more]
WAKLO_ARATH4.074e-3238.05Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAKLA_ARATH4.074e-3238.61Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAKLK_ARATH5.321e-3241.09Putative wall-associated receptor kinase-like 11 O... [more]
WAKLH_ARATH5.321e-3240.31Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
RPK1_ARATH5.321e-3237.26Probable LRR receptor-like serine/threonine-protei... [more]
CRK27_ARATH5.321e-3239.35Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
WAKLG_ARATH6.949e-3240.10Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
FERON_ARATH6.949e-3238.07Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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