FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15224 contig Ccv1_Contig15224:435..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.466e-37
Identity = 95/226 (42.04%), Postives = 129/226 (57.08%), Query Frame = 2
Query:   83 WRRRKYENNVQDSSTSET------NLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            W RRK +++  D    E        L+ F+  EL  AT  F  K  LGRG FG VYKG L  A G  +AVK+L +   +  E +F++EV  I    H+NL++L GFC     RLLVY +M NG++A+ +   P+     DW  R  I+L  ARGL YLH+ C+  IIH D+K  NILLD  F A + DFGL+KL+  + S   T +RGT G++APE++    S  K
Sbjct:  254 WLRRKPQDHFFDVPAEEDPEVHLGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRL--ADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEK 477          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.221e-37
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            F+  ++K AT  F  E  +G G FG VYKGVL  A G  IAVK+L   +++  REF +E+  I    H NLV+L G C E    LLVYE++ N +LA  +F   K     DW+ R ++ + IA+GL YLHEE  + I+H DIK  N+LLD   +AKISDFGL+KL   + +   T I GT GY+APE+
Sbjct:  655 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVL--ADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEY 840          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 87/189 (46.03%), Postives = 118/189 (62.43%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKL-LLSDQSRTHTMIRGTRGYVAPEW 694
            F++ EL  AT  F  +  LG G FG VYKG L S +G+ +AVK+LDR   +  REF  EV  +   HH NLV L+G+C +   RLLVYEFM  G+L + +  +P      DWN+R++I+   A+GL +LH++ N P+I+ D K  NILLD  F  K+SDFGL+KL    D+S   T + GT GY APE+
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDS-TGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 261          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.493e-37
Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 2
Query:  164 LKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP--KP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            L+EAT  F +++GRGSFG VY G +K   GK +AVK     +    R+F +EV+ + R HH+NLV L+G+C+EA  R+LVYE+M NG+L + +      KP DW  R++I+ + A+GL YLH  CN  IIH D+K  NILLD    AK+SDFGLS+    D +   ++ +GT GY+ PE+
Sbjct:  601 LEEATDNFSKKVGRGSFGSVYYGRMKD--GKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEY 778          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 85/197 (43.15%), Postives = 119/197 (60.41%), Query Frame = 2
Query:  149 FSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            F+  +L+ AT  F     LG G +G+VY+G  K  +G  +AVKKL     + E+EF+ EV AIG   HKNLV+LLG+C E ++R+LVYE++ +G L   +    +      W  R++I    A+ L YLHE     ++H DIK  NIL+D+ F+AK+SDFGL+KLL S +S   T + GT GYVAPE+    L   K
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRG--KLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEK 365          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 97/229 (42.36%), Postives = 130/229 (56.77%), Query Frame = 2
Query:   83 WRRRKYENNVQDSSTSET------NLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER----EREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            WRRRK +    D    E        L+ FS  EL+ AT  F  K  LGRG FG VYKG L  A G  +AVK   RL +ER    E +F++EV  I    H+NL++L GFC     RLLVY +M NG++A+ +   P       W++R +I+L  ARGL YLH+ C+  IIH D+K  NILLD  F A + DFGL++L+    +   T +RGT G++APE++    S  K
Sbjct:  265 WRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRL--ADGTLVAVK---RLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 488          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.370e-37
Identity = 80/190 (42.11%), Postives = 124/190 (65.26%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP--KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH--TMIRGTRGYVAPEW 694
            + F++ EL + T  F +  ++G G +G VYKG L +  G+ IA+K+  + + +   EFK+E+  + R HHKN+V+LLGFC +   ++LVYE++ NG+L + +      K DW  R++I+L   +GL YLHE  + PIIH D+K  NILLD + +AK++DFGLSK L+ D  + H  T ++GT GY+ PE+
Sbjct:  620 KAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPN--GQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSK-LVGDPEKAHVTTQVKGTMGYLDPEY 806          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.370e-37
Identity = 80/188 (42.55%), Postives = 123/188 (65.43%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD-----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            F Y +L +AT GFKE   +G G FGIVY+G ++S+S + IAVKK+   + +  REF +E+ ++GR  HKNLV L G+C    + LL+Y+++ NG+L +L+++ P+       WN R +I+  IA GL+YLHEE    +IH D+KP N+L+D+  + ++ DFGL++L         T++ GT GY+APE
Sbjct:  351 FRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQ-IAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPE 537          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.370e-37
Identity = 92/213 (43.19%), Postives = 134/213 (62.91%), Query Frame = 2
Query:   83 WRRRKYE---NNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            W+R++     N+V DS+  ++ LR F    +  AT  F  E  LG+G FG VYKG+L S  G+ IAVK+L + + +   EFK+EV  + R  H+NLV+LLGFC+E    +LVYEF+ N +L + IF   K     W++R  I   +ARGL+YLHE+  + IIH D+K  NILLD   + K++DFG+++L   D++R  T  + GT GY+APE+
Sbjct:  309 WKRKQSHTIINDVFDSNNGQSMLR-FDLRMIVTATNNFSLENKLGQGGFGSVYKGILPS--GQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEY 518          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.224e-36
Identity = 95/214 (44.39%), Postives = 132/214 (61.68%), Query Frame = 2
Query:   80 KWRRRKY-ENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQ 700
            + RRR Y E N    S  +  LR F    +  AT  F  E  LG+G FG VYKG+L S  G+ IAVK+L   + + E EFK+EV  + R  H+NLV+LLGFC+E    +LVYE + N +L + IF   K     W++R RI   +ARGL+YLHE+  + IIH D+K  NILLD   + K++DFG+++L   D++R  T  + GT GY+APE+V+
Sbjct:  305 RMRRRIYTEINKNSDSDGQATLR-FDLGMILIATNEFSLENKLGQGGFGSVYKGILPS--GQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVR 515          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SERK4_ARATH2.466e-3742.04Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5344_ARATH3.221e-3745.74Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH4.206e-3746.03Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y1677_ARATH5.493e-3746.11Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH7.175e-3743.15Probable receptor-like protein kinase At2g42960 OS... [more]
SERK2_ARATH7.175e-3742.36Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5977_ARATH9.370e-3742.11Probable leucine-rich repeat receptor-like protein... [more]
LRKA3_ARATH9.370e-3742.55Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK37_ARATH9.370e-3743.19Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK36_ARATH1.224e-3644.39Cysteine-rich receptor-like protein kinase 36 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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