FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.598e-36
Identity = 89/214 (41.59%), Postives = 126/214 (58.88%), Query Frame = 2
Query:   83 WRRRKYENNVQDSSTS-ETNLRLFSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP-----KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH--TMIRGTRGYVAPEW 694
            W++R+ +N++       +     F+  ++K AT  F    ++G G FG VYKG L  + GK IAVK+L   +++  REF +E+  I    H NLV+L G C E    +LVYE++ N  L+  +F        K DW+ R +I L IA+GL +LHEE  + I+H DIK  N+LLD   +AKISDFGL+K  L+D   TH  T I GT GY+APE+
Sbjct:  643 WKKRRDKNDIDKELRGLDLQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGEL--SEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAK--LNDDGNTHISTRIAGTIGYMAPEY 852          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 78/191 (40.84%), Postives = 118/191 (61.78%), Query Frame = 2
Query:  134 TNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEW 694
            T  R FSY+++   T  F+  LG+G FG+VY G +     + +AVK L   + +  ++FK+EV  + R HHKNLV L+G+CDE  N  L+YE+M NG L   +         +W  R++I +E A+GL YLH  C  P++H D+K  NILL+ +F AK++DFGLS+  L+  ++   T++ GT GY+ PE+
Sbjct:  563 TKNRRFSYSQVVIMTNNFQRILGKGGFGMVYHGFVNGT--EQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEY 751          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 92/210 (43.81%), Postives = 127/210 (60.48%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRL-FSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWV 697
            R+R+   +V+  + +  +  L F Y+ L++ATG F    +LG+G FG VYKGVL    G+ IAVK+L    + R  +F +EV+ I    HKNLV+LLG        LLVYE++ N +L   IF + +    DW  R  I +  A GLVYLHE+ +V IIH DIK  NILLD+   AKI+DFGL++    D+S   T I GT GY+APE++
Sbjct:  291 RKRRGSKDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPD--GRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYL 498          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.726e-36
Identity = 88/200 (44.00%), Postives = 116/200 (58.00%), Query Frame = 2
Query:  113 QDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            +D  + E  +  FS  ++K AT  F     +G G FG VYKG  K   G  IAVK+L   +++  REF +E+  I   HH NLV+L G C E    LLVYEF+ N +LA  +F   +     DW  R +I + +ARGL YLHEE  + I+H DIK  N+LLD   + KISDFGL+KL   D +   T I GT GY+APE+
Sbjct:  600 KDFKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKG--KLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEY 797          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.561e-36
Identity = 92/226 (40.71%), Postives = 127/226 (56.19%), Query Frame = 2
Query:   83 WRRRKYENNVQDSSTSET------NLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            W RRK + +  D    E         + FS  EL  AT  F +   LG+G FGI+YKG L  A    +AVK+L +   +  E +F++EV  I    H+NL++L GFC     RLLVY +M NG++A+ +   P+     DW  R  I+L  ARGL YLH+ C+  IIH D+K  NILLD  F A + DFGL+KL+  + S   T +RGT G++APE++    S  K
Sbjct:  235 WLRRKLQGHFLDVPAEEDPEVYLGQFKRFSLRELLVATEKFSKRNVLGKGRFGILYKGRL--ADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEK 458          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.561e-36
Identity = 78/186 (41.94%), Postives = 118/186 (63.44%), Query Frame = 2
Query:  155 YNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            Y +L  AT GFKE   +G G FG V++G L S S   IAVKK+   + +  REF +E+ ++GR  HKNLV L G+C +  + LL+Y+++ NG+L +L+++ P+       WN R +I+  IA GL+YLHEE    +IH DIKP N+L+++  + ++ DFGL++L         T++ GT GY+APE
Sbjct:  351 YKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPE 536          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 83/197 (42.13%), Postives = 125/197 (63.45%), Query Frame = 2
Query:  131 ETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF----AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWVQ 700
            E  LR  ++ +L +AT GF  +  +G G FG VYK +LK   G A+A+KKL  ++ + +REF +E+  IG+  H+NLV LLG+C     RLLVYEFM  G+L +++     A  K +W+ R +I++  ARGL +LH  C+  IIH D+K  N+LLD    A++SDFG+++L+ + D   + + + GT GYV PE+ Q
Sbjct:  865 EKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKD--GSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ 1059          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.074e-36
Identity = 86/203 (42.36%), Postives = 125/203 (61.58%), Query Frame = 2
Query:  107 NVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEW 694
            N+ D  T +   + F++ EL EATG F+ +  LG G FG V+KG ++    + +A+K+LDR   +  REF  EV  +    H NLV+L+GFC E   RLLVYE+M  G+L + +  +P   KP DWN R++I+   ARGL YLH+    P+I+ D+K  NILL   +  K+SDFGL+K+  S D++   T + GT GY AP++
Sbjct:   78 NLNDQVTGK-KAQTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLD-QVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDY 278          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.932e-36
Identity = 91/212 (42.92%), Postives = 133/212 (62.74%), Query Frame = 2
Query:   92 RKYENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQS--RTHTMIRGTRGYVAPEWVQMH 706
            R  EN  ++ + S  +++ F ++ L++AT  F  E  LG G FG VYKGVL  + G+ IAVK+L + AQ+ E EFK+E   + +  H+NLV+LLG+  E   RLLVYEF+ + +L   IF      + +W +R +I   +ARGL+YLH++  + IIH D+K  NILLD   + KI+DFG+++L   D +  R    I GT GY+APE+V MH
Sbjct:  314 RNSENKHENENISTDSMK-FDFSVLQDATSHFSLENKLGEGGFGAVYKGVL--SDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYV-MH 521          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 85/203 (41.87%), Postives = 124/203 (61.08%), Query Frame = 2
Query:  128 SETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVL--------KSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF--AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKL-LLSDQSRTHTMIRGTRGYVAPEWV 697
            S  NL+ F++NELK AT  F+ +  LG G FG V+KG +        K  SG  +AVKKL     +  +E+ +EV+ +G+  H NLV+L+G+C E  NRLLVYEFM  G+L N +F        W +R+++++  A+GL +LH +    +I+ D K  NILLD  F++K+SDFGL+K     D++   T + GT GY APE+V
Sbjct:   64 SSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLH-DAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYV 265          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1765_ARATH1.598e-3641.59Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH2.087e-3640.84Probable LRR receptor-like serine/threonine-protei... [more]
CRK2_ARATH2.087e-3643.81Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y1534_ARATH2.726e-3644.00Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH3.561e-3640.71Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
LRKA2_ARATH3.561e-3641.94Lectin-domain containing receptor kinase A4.2 OS=A... [more]
BRI1_ARATH4.650e-3642.13Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
RLCK7_ARATH6.074e-3642.36Probable serine/threonine-protein kinase RLCKVII O... [more]
CRK26_ARATH7.932e-3642.92Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
APK2B_ARATH1.036e-3541.87Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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