FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15224 contig Ccv1_Contig15224:435..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 87/207 (42.03%), Postives = 125/207 (60.39%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKK--LDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ-SRTHTMIRGTRGYVAPEWVQMH 706
            D        R+F+Y EL++A  GFKEE  +G+GSF  VYKGVL+   G  +AVK+  +    Q+   EF++E+  + R +H +L+ LLG+C+E   RLLVYEFM +G+L N +    K      DW  RV I+++ ARG+ YLH     P+IH DIK  NIL+D   +A+++DFGLS L   D  S    +  GT GY+ PE+ ++H
Sbjct:  489 DELQKRRRARVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRD--GTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLH 693          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 82/196 (41.84%), Postives = 120/196 (61.22%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSD-QSRTHTMIRGTRGYVAPE 691
            D + S    + F+Y+E+ + T  F+  LG+G FG+VY G +K +  + +AVK L + + +  +EFK+EV  + R HH NLV L+G+C E     LVYEF+ NG L   +         +W++R+RI+LE A GL YLH  C  P++H D+K  NILLD  F AK++DFGLS+    + +S+  T I GT GY+ PE
Sbjct:  543 DVTFSNKKSKRFTYSEVVQVTKNFQRVLGKGGFGMVYHGTVKGS--EQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPE 736          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 77/191 (40.31%), Postives = 117/191 (61.26%), Query Frame = 2
Query:  134 TNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEW 694
            T  R F+Y+E+   T  F+  LG+G FG+VY G + +   + +AVK L   + +  +EFK+EV  + R HHKNLV L+G+CDE  N  L+YE+M NG L   +         +W  R++I +E A+GL YLH  C  P++H D+K  NILL+ +  AK++DFGLS+   +  ++   T++ GT GY+ PE+
Sbjct:  577 TKNRRFTYSEVVTMTNNFERVLGKGGFGMVYHGTVNNT--EQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEY 765          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 83/211 (39.34%), Postives = 132/211 (62.56%), Query Frame = 2
Query:   80 KWRRRKYENNVQDSSTSETNLRLFSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            K  ++ Y+   +D  T+  +L+ F +  ++ AT  F    +LG+G FG VYKG L +  G  +AVK+L + + + E+EFK+EV  + +  H+NLV+LLGFC E   ++LVYEF+ N +L   +F      + DW  R +I   IARG++YLH++  + IIH D+K  NILLD   + K++DFG++++   DQ+  HT  + GT GY++PE+
Sbjct:  306 KRAKKTYDTPEEDDITTAGSLQ-FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPN--GVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEY 513          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35
Identity = 81/205 (39.51%), Postives = 118/205 (57.56%), Query Frame = 2
Query:   92 RKYENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEW 694
            RK + +    S+   N R ++Y E+   T  F+  LG G FG+VY G +     + +AVK L   + +  ++FK+EV  + R HH NLV L+G+CDE  + +L+YE+M NG L   +          W  R+RI+ E A+GL YLH  C  P+IH DIK  NILLDN F AK+ DFGLS+   +  ++   T + G+ GY+ PE+
Sbjct:  562 RKKKPSKASRSSMVANKRSYTYEEVAVITNNFERPLGEGGFGVVYHGNVND--NEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEY 764          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 2
Query:  134 TNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEW 694
            T  + F+Y+E++  T  F+  LG G FG+VY G+L     + IAVK L + + +  +EFK+EV  + R HH NLV L+G+CDE  N  L+YE+  NG L   +          W+ R++I +E A+GL YLH  C  P++H D+K  NILLD +F AK++DFGLS+   +  ++   T + GT GY+ PE+
Sbjct:  558 TQTKRFTYSEVEALTDNFERVLGEGGFGVVYHGILNGT--QPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEY 746          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35
Identity = 83/211 (39.34%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSD---QSRTHTMIRGTRGYVAPEW 694
            ++R    ++++    +  L    ++ ++ AT  F  +  LG G FG VYKGVL    G+ IAVK+L   + + + EF +EVS + +  H+NLV+LLGFC +   R+L+YEF  N +L + IF   +    DW  R RI   +ARGL+YLHE+    I+H D+K  N+LLD+  + KI+DFG++KL  +D   Q+R  + + GT GY+APE+
Sbjct:  311 KQRHEGKDLEELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDY--GEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEY 519          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35
Identity = 87/212 (41.04%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSE---TNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            RR+K     +  +T E   T+   FS+  ++ AT  F +   +GRG FG VY+G  K +SG  +AVK+L + + +   EFK+E   + +  HKNLV+LLGFC E   ++LVYEF+ N +L   +F   K    DW  R  I   IARG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQS+ +T  I GT GY++PE+
Sbjct:  309 RRKKSYKTTEVQATDEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRG--KLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEY 518          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35
Identity = 84/201 (41.79%), Postives = 122/201 (60.70%), Query Frame = 2
Query:  122 STSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWVQ 700
            +T E  LR  ++  L EAT GF  +  +G G FG VYK   K A G  +A+KKL ++  + +REF +E+  IG+  H+NLV LLG+C     RLLVYE+M  G+L  ++    K      DW+ R +I++  ARGL +LH  C   IIH D+K  N+LLD  F A++SDFG+++L+ + D   + + + GT GYV PE+ Q
Sbjct:  837 ATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKA--KLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQ 1035          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.308e-35
Identity = 81/207 (39.13%), Postives = 123/207 (59.42%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSD-QSRTHTMIRGTRGYVAPEW 694
            RR+  E+N   + +  T  R  +Y E+ + T  F+  LG+G FG VY G L+      +AVK L   + +  +EFK+EV  + R HH+NLV L+G+CD+  N  L+YE+M NG L   +      +   W  R++I++E A+GL YLH  C  P++H D+K  NILL+  + AK++DFGLS+    D +S   T++ GT GY+ PE+
Sbjct:  535 RRKNGESNKGTNPSIITKERRITYPEVLKMTNNFERVLGKGGFGTVYHGNLEDTQ---VAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEY 738          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ACR4_ARATH1.036e-3542.03Serine/threonine-protein kinase-like protein ACR4 ... [more]
RLK7_ARATH1.353e-3541.84Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
RLK6_ARATH1.353e-3540.31Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK5_ARATH1.353e-3539.34Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y4245_ARATH1.767e-3539.51Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH1.767e-3540.84Probable LRR receptor-like serine/threonine-protei... [more]
CRK41_ARATH1.767e-3539.34Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK35_ARATH1.767e-3541.04Putative cysteine-rich receptor-like protein kinas... [more]
BRL3_ARATH1.767e-3541.79Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5188_ARATH2.308e-3539.13Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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