FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: IGF1R_BOVIN (Insulin-like growth factor 1 receptor (Fragment) OS=Bos taurus GN=IGF1R PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 53/183 (28.96%), Postives = 93/183 (50.82%), Query Frame = 2
Query:  194 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWV 697
            ELG+GSFG+VY    KGV+K      +A+K ++  A  RER EF +E S +   +  ++V+LLG   +    L++ E M  G L + + +          +  P  +  ++++ EIA G+ YL+       +H D+  +N ++   F+ KI DFG+++    D   T    +G +G +   W+
Sbjct:  277 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWM 452          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: FER_RAT (Proto-oncogene tyrosine-protein kinase Fer (Fragment) OS=Rattus norvegicus GN=Fer PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLH-EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            E LG+G+FG VYKG LK  +  A+   K D L QE + +F  E   + +  H N+V+L+G C +     ++ E +  G   + +    K +  L+  VR SL++A G++YL  + C    IH D+  +N L+    + KISDFG+S+
Sbjct:   68 ELLGKGNFGEVYKGTLKDKTPVAVKTCKED-LPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFL-RKRKDELKLKQLVRFSLDVAAGMLYLEGKNC----IHRDLAARNCLVGENNTLKISDFGMSR 208          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CIPK4_ORYSJ (CBL-interacting protein kinase 4 OS=Oryza sativa subsp. japonica GN=CIPK4 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 62/175 (35.43%), Postives = 89/175 (50.86%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRL-----AQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPK---PDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKL--LLSDQSRTHTMIRGTRGYVAPE 691
            LGRG+F  VY      A G+A+AVK +D+      A    R  + EV+A+ R  H ++++L           LV E    G L + + A+P+   P+   R R+ +++   L Y H      + H D+KPQN+LLD   + K+SDFGL+ L   L D  R HT   GT  Y APE
Sbjct:   31 LGRGTFAKVYLA-RAVAGGEAVAVKVIDKAEVMGTAGMAPRVLR-EVAAMRRLRHPHVLRLHEVLATRARIYLVMELATGGDLLSRLAALPRRRLPESAAR-RVFVQLVDALSYCHAR---GVAHRDVKPQNVLLDGDGNLKVSDFGLAALPDTLRDDGRLHTAC-GTPAYAAPE 198          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CHK1_CHICK (Serine/threonine-protein kinase Chk1 OS=Gallus gallus GN=CHEK1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 56/172 (32.56%), Postives = 90/172 (52.33%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL-SDQSRTHTMIRGTRGYVAPE 691
            + LG G++G V   V +    +A+AVK +D + A +     K E+      +H+N+V+  G   E   + L  E+   G L + I     +P+P+     R   ++  G+VYLH   ++ I H D+KP+N+LLD   + KISDFGL+ +   + + R    + GT  YVAPE
Sbjct:   13 QTLGEGAYGEVQLAVNRRTE-EAVAVKIVDMKRAADCPENIKKEICINKMLNHENVVKFYGHRREGATQYLFLEYCSGGELFDRIEPDIGMPEPEAQ---RFFQQLIAGVVYLH---SMGITHRDLKPENLLLDERDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPE 177          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BTKL_DROME (Tyrosine-protein kinase Btk29A OS=Drosophila melanogaster GN=Btk29A PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 48/164 (29.27%), Postives = 87/164 (53.05%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 673
            EELG G FG+V +G  + +   A+ + K   ++++   +F  E   + +  H NLVQL G C +     +V E+M +G+L N +    K    +  L + + +++++G+ YL        IH D+  +N L+ +    K++DFGL++ +L DQ   +T   GT+
Sbjct:  530 EELGSGQFGVVRRGKWRGSIDTAVKMMKEGTMSED---DFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERH---NYIHRDLAARNCLVGSENVVKVADFGLARYVLDDQ---YTSSGGTK 684          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: TESK1_RAT (Dual specificity testis-specific protein kinase 1 OS=Rattus norvegicus GN=Tesk1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 55/183 (30.05%), Postives = 97/183 (53.01%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL---DNYFSAKISDFGLSKLL--LSDQSRTHTM-IRGTRGYVAPEWVQMHLSQPK 721
            E++G G F  VYK V    SG+ + V K+++L   R    + EV  + R  H N+++ +G C        + E+M  GTL  L+ +     W +R+ ++L+IA+GL YLH +    + H D+  +N L+   D  F+A + DFGL++ +    + +R   + + G+  ++APE ++  L   K
Sbjct:   56 EKIGAGFFSEVYK-VRHRQSGQ-VMVLKMNKLPSNRSNTLR-EVQLMNRLRHPNILRFMGVCVHQGQLHALTEYMNGGTLEQLLSSPEPLSWPVRLHLALDIAQGLRYLHAK---GVFHRDLTSKNCLVRREDGGFTAVVGDFGLAEKIPVYREGARKEPLAVVGSPYWMAPEVLRGELYDEK 232          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: STK25_MOUSE (Serine/threonine-protein kinase 25 OS=Mus musculus GN=Stk25 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 49/171 (28.65%), Postives = 93/171 (54.39%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            + +G+GSFG VYKG+  + + + +A+K +D   A++   + + E++ + +     + +  G   ++    ++ E++G G+  +L+   P  +  +   I  EI +GL YLH E     IH DIK  N+LL      K++DFG++  L   Q + +T + GT  ++APE ++
Sbjct:   24 DRIGKGSFGEVYKGI-DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT-ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKMADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 188          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: ROCO4_DICDI (Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum GN=roco4 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 55/186 (29.57%), Postives = 98/186 (52.69%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAIAVKKL-------DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNY-----FSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWV 697
            +++++G+G FG+V+KG L       +A+K L       +    E+ +EF+ EV  +   +H N+V+L G         +V EF+  G L + +     P  W++++R+ L+IA G+ Y+  + N PI+H D++  NI L +        AK++DFGLS      Q   H++  + G   ++APE +
Sbjct: 1028 YEKQIGKGGFGLVHKGRLVK-DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS------QQSVHSVSGLLGNFQWMAPETI 1203          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_SAIBB (Hepatocyte growth factor receptor OS=Saimiri boliviensis boliviensis GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_RABIT (Hepatocyte growth factor receptor OS=Oryctolagus cuniculus GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1081 FSEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1228          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IGF1R_BOVIN2.483e-1328.96Insulin-like growth factor 1 receptor (Fragment) O... [more]
FER_RAT2.483e-1334.69Proto-oncogene tyrosine-protein kinase Fer (Fragme... [more]
CIPK4_ORYSJ2.483e-1335.43CBL-interacting protein kinase 4 OS=Oryza sativa s... [more]
CHK1_CHICK2.483e-1332.56Serine/threonine-protein kinase Chk1 OS=Gallus gal... [more]
BTKL_DROME2.483e-1329.27Tyrosine-protein kinase Btk29A OS=Drosophila melan... [more]
TESK1_RAT3.243e-1330.05Dual specificity testis-specific protein kinase 1 ... [more]
STK25_MOUSE3.243e-1328.65Serine/threonine-protein kinase 25 OS=Mus musculus... [more]
ROCO4_DICDI3.243e-1329.57Probable serine/threonine-protein kinase roco4 OS=... [more]
MET_SAIBB3.243e-1334.44Hepatocyte growth factor receptor OS=Saimiri boliv... [more]
MET_RABIT3.243e-1334.44Hepatocyte growth factor receptor OS=Oryctolagus c... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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