FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_PONAB (Hepatocyte growth factor receptor OS=Pongo abelii GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_PAPAN (Hepatocyte growth factor receptor OS=Papio anubis GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_PANTR (Hepatocyte growth factor receptor OS=Pan troglodytes GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_OTOGA (Hepatocyte growth factor receptor OS=Otolemur garnettii GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1081 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDENFTVKVADFGLAR 1228
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_MICMU (Hepatocyte growth factor receptor OS=Microcebus murinus GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1081 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1228
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_HYLLE (Hepatocyte growth factor receptor OS=Hylobates leucogenys GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_HUMAN (Hepatocyte growth factor receptor OS=Homo sapiens GN=MET PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_GORGO (Hepatocyte growth factor receptor OS=Gorilla gorilla gorilla GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_EULMM (Hepatocyte growth factor receptor OS=Eulemur macaco macaco GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1081 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1228
[Close]
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MET_COLGU (Hepatocyte growth factor receptor OS=Colobus guereza GN=MET PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2 
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            F E +GRG FG VY G L    GK I  AVK L+R+    E  +F +E   +    H N++ LLG C  +    L+V  +M +G L N I      P     +   L++A+G+ YL  +     +H D+  +N +LD  F+ K++DFGL++
Sbjct: 1080 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 1227
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_PONAB3.243e-1334.44Hepatocyte growth factor receptor OS=Pongo abelii ... [more]
MET_PAPAN3.243e-1334.44Hepatocyte growth factor receptor OS=Papio anubis ... [more]
MET_PANTR3.243e-1334.44Hepatocyte growth factor receptor OS=Pan troglodyt... [more]
MET_OTOGA3.243e-1334.44Hepatocyte growth factor receptor OS=Otolemur garn... [more]
MET_MICMU3.243e-1334.44Hepatocyte growth factor receptor OS=Microcebus mu... [more]
MET_HYLLE3.243e-1334.44Hepatocyte growth factor receptor OS=Hylobates leu... [more]
MET_HUMAN3.243e-1334.44Hepatocyte growth factor receptor OS=Homo sapiens ... [more]
MET_GORGO3.243e-1334.44Hepatocyte growth factor receptor OS=Gorilla goril... [more]
MET_EULMM3.243e-1334.44Hepatocyte growth factor receptor OS=Eulemur macac... [more]
MET_COLGU3.243e-1334.44Hepatocyte growth factor receptor OS=Colobus guere... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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