FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: JAK2_MOUSE (Tyrosine-protein kinase JAK2 OS=Mus musculus GN=Jak2 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEA--LNRLLVYEFMGNGTLANLIFA-IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ 640
            F ++LG+G+FG V       L+  +G+ +AVKKL    +E  R+F+ E+  +    H N+V+  G C  A   N  L+ E++  G+L + +     + D    ++ + +I +G+ YL  +     IH D+  +NIL++N    KI DFGL+K+L  D+
Sbjct:  851 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLIMEYLPYGSLRDYLQKHKERIDHKKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 1005          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: EPHB5_CHICK (Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 62/184 (33.70%), Postives = 96/184 (52.17%), Query Frame = 2
Query:  188 KEELGRGSFGIVYKGVLKSASGK--AIAVKKLDR-LAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR-THTMIRGTR---GYVAPEWVQ 700
            +E +G G FG V  G LK    +   +A+K L      E+ REF SE S +G+  H N++ L G   ++   ++V EFM NG+L + +      F++ +    LR      IA G+ YL +   +  +H D+  +NIL+++    K+SDFGLS+ L  D S  T+T   G +    + APE VQ
Sbjct:  640 EEVIGSGEFGEVCFGRLKHPGKREYTVAIKTLKSGYTDEQRREFLSEASIMGQFEHPNVIHLEGVVTKSRPVMIVTEFMENGSLDSFLRQKEGQFSVLQLVGMLR-----GIAAGMRYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDASNPTYTGALGCKIPIRWTAPEAVQ 815          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: DLK1_CAEEL (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis elegans GN=dlk-1 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 53/170 (31.18%), Postives = 88/170 (51.76%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            E LG GS G V++G L++   + +AVKK+++L +       +E+  +    H+N+++ LG C ++    +V E+   G L  ++ +       L  +   EIA G+ YLH+     +IH D+K  NIL+    S KI DFG S +     S T     GT  ++APE ++
Sbjct:  139 EWLGSGSQGAVFRGQLEN---RTVAVKKVNQLKE-------TEIKHLRHLRHQNIIEFLGVCSKSPCYCIVMEYCSKGQLCTVLKSRNTITRELFAQWVKEIADGMHYLHQN---KVIHRDLKSPNILISAEDSIKICDFGTSHMQKKMDS-TMMSFCGTVSWMAPEMIK 294          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: TNI3K_RAT (Serine/threonine-protein kinase TNNI3K OS=Rattus norvegicus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 56/174 (32.18%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQLLGFC-DEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            F E +G GSFG VYKG  ++   K +A+K+        + +   F  EVS + + +H  +VQ +G C D+     +V +++  G+L +L+    +  D   ++ I++++A+G+ YLH     PIIH D+   NILL     A ++DFG S+ L S      T   G   ++APE
Sbjct:  465 FHEIIGSGSFGKVYKGRCRN---KIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHS-LTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPE 634          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 56/174 (32.18%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQLLGFC-DEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            F E +G GSFG VYKG  ++   K +A+K+        + +   F  EVS + + +H  +VQ +G C D+     +V +++  G+L +L+    +  D   ++ I++++A+G+ YLH     PIIH D+   NILL     A ++DFG S+ L S      T   G   ++APE
Sbjct:  464 FHEIIGSGSFGKVYKGRCRN---KIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHS-LTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPE 633          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PKN2_CLOAB (Probable serine/threonine-protein kinase CA_C1728 OS=Clostridium acetobutylicum GN=CA_C1728 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 52/174 (29.89%), Postives = 87/174 (50.00%), Query Frame = 2
Query:  188 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER---EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            +EE+G G   +VYK  + +   + +AVK L     E E    +FK E SA  R  + N+V +     +     +V E++   TL  LI    K ++N  +  + +IA+ L + H+     I+H DIKP NI++ +    K++DFG++K        T   + G+  Y++PE  Q
Sbjct:   13 EEEIGVGGTAVVYKA-MDTLLNRHVAVKVLKHEFTEDEEFVFKFKREASAAARIANANIVNIYDVGADGNVNYIVMEYVAGKTLKKLIKENGKIEFNKIIDYATQIAKALNFAHKN---GIVHRDIKPHNIMVTDDDIIKVTDFGIAKASNESTITTTNKVVGSAHYLSPEQAQ 182          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MOS_MSVMT (Serine/threonine-protein kinase-transforming protein mos OS=Moloney murine sarcoma virus (strain ts110) GN=V-MOS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE---REREFKSEVSAIGRTHHKNLVQLLGFCD---EALNRL--LVYEFMGNGTLANLIFAIPKPDWNLRVR----------ISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL--LSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            LG G FG VYK       G  +A+K++++  ++    +R F +E++  G   H N+V+++       E  N L  ++ EF GN TL  +I+   +    L  R           SL++  GL++LH +    I+H D+KP NIL+      KISDFG S+ L  L  +  +   I GT  + APE ++  ++ PK
Sbjct:   80 LGSGGFGSVYKATYH---GVPVAIKQVNKCTEDLRASQRSFWAELNIAG-LRHDNIVRVVAASTRTPEDSNSLGTIIMEFGGNVTLHQVIYDATRSPEPLSCRKQLSLGKCLKYSLDVVNGLLFLHSQS---ILHLDLKPANILISEQDVCKISDFGCSQKLQVLRGRQASPPHIGGTYTHQAPEILKGEIATPK 267          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MOS_MSVMO (Serine/threonine-protein kinase-transforming protein mos OS=Moloney murine sarcoma virus GN=V-MOS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE---REREFKSEVSAIGRTHHKNLVQLLGFCD---EALNRL--LVYEFMGNGTLANLIFAIPKPDWNLRVR----------ISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL--LSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            LG G FG VYK       G  +A+K++++  ++    +R F +E++  G   H N+V+++       E  N L  ++ EF GN TL  +I+   +    L  R           SL++  GL++LH +    I+H D+KP NIL+      KISDFG S+ L  L  +  +   I GT  + APE ++  ++ PK
Sbjct:  100 LGSGGFGSVYKATYH---GVPVAIKQVNKCTEDLRASQRSFWAELNIAG-LRHDNIVRVVAASTRTPEDSNSLGTIIMEFGGNVTLHQVIYDATRSPEPLSCRKQLSLGKCLKYSLDVVNGLLFLHSQS---ILHLDLKPANILISEQDVCKISDFGCSQKLQDLRGRQASPPHIGGTYTHQAPEILKGEIATPK 287          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: INSR_DROME (Insulin-like receptor OS=Drosophila melanogaster GN=InR PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 55/194 (28.35%), Postives = 93/194 (47.94%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAI----AVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA----------------------IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWV 697
            LG+GSFG+VY+G+LKS     +    A+K ++  A +RER  F SE S +      ++V+LLG C      L+V E M  G L + + A                      +  P +    ++++EIA G+ YL  +     +H D+  +N ++ +  + KI DFG+++    D   T    +GT+G +   W+
Sbjct: 1377 LGQGSFGMVYEGILKSFPPNGVDRECAIKTVNENATDRERTNFLSEASVMKEFDTYHVVRLLGVCSRGQPALVVMELMKKGDLKSYLRAHRPEERDEAMMTYLNRIGVTGNVQPPTYGRIYQMAIEIADGMAYLAAK---KFVHRDLAARNCMVADDLTVKIGDFGMTR----DIYETDYYRKGTKGLLPVRWM 1563          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CIPK7_ORYSJ (CBL-interacting protein kinase 7 OS=Oryza sativa subsp. japonica GN=CIPK7 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 57/175 (32.57%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDR-----LAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPK---PDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKL--LLSDQSRTHTMIRGTRGYVAPE 691
            LGRG+F  VY     +     +AVK LD+                EV+A+ R  H N+++L           LV E    G L + + ++P    P+ +   R+ L++   L+Y H      + H D+KPQN+LLD + + K+SDFGL+ L   L D  R HT   GT  + APE
Sbjct:   25 LGRGTFAKVYHARSLAPGADPVAVKVLDKPDLAAAGAGMATRVLREVAAMRRLRHPNVLRLHEVLATRSKVYLVMELAPGGDLLSRLASLPSRRLPE-HAAQRVFLQLVSALIYCHAR---GVSHRDVKPQNVLLDAHGNLKVSDFGLAALPDSLRDDGRLHTAC-GTPAFAAPE 194          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
JAK2_MOUSE3.243e-1331.65Tyrosine-protein kinase JAK2 OS=Mus musculus GN=Ja... [more]
EPHB5_CHICK3.243e-1333.70Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5... [more]
DLK1_CAEEL3.243e-1331.18Mitogen-activated protein kinase kinase kinase dlk... [more]
TNI3K_RAT4.236e-1332.18Serine/threonine-protein kinase TNNI3K OS=Rattus n... [more]
TNI3K_MOUSE4.236e-1332.18Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
PKN2_CLOAB4.236e-1329.89Probable serine/threonine-protein kinase CA_C1728 ... [more]
MOS_MSVMT4.236e-1331.28Serine/threonine-protein kinase-transforming prote... [more]
MOS_MSVMO4.236e-1331.28Serine/threonine-protein kinase-transforming prote... [more]
INSR_DROME4.236e-1328.35Insulin-like receptor OS=Drosophila melanogaster G... [more]
CIPK7_ORYSJ4.236e-1332.57CBL-interacting protein kinase 7 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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