FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 56/174 (32.18%), Postives = 95/174 (54.60%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS---LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPE 691
            E++G G++G+VYKG  KS +G+ +A+KK+ RL  E E    +   EVS +    H N+V+LL    +     L++EF+    L   + +IP   +   + +     +I  G+ + H      ++H D+KPQN+L+DN    K++DFGL++   +  +  TH ++  T  Y APE
Sbjct:    8 EKIGEGTYGVVYKGRHKS-TGQVVAMKKI-RLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMD-LKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPVRVYTHEVV--TLWYRAPE 173          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 56/174 (32.18%), Postives = 95/174 (54.60%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS---LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPE 691
            E++G G++G+VYKG  KS +G+ +A+KK+ RL  E E    +   EVS +    H N+V+LL    +     L++EF+    L   + +IP   +   + +     +I  G+ + H      ++H D+KPQN+L+DN    K++DFGL++   +  +  TH ++  T  Y APE
Sbjct:    8 EKIGEGTYGVVYKGRHKS-TGQVVAMKKI-RLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMD-LKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPVRVYTHEVV--TLWYRAPE 173          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 56/174 (32.18%), Postives = 95/174 (54.60%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS---LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPE 691
            E++G G++G+VYKG  KS +G+ +A+KK+ RL  E E    +   EVS +    H N+V+LL    +     L++EF+    L   + +IP   +   + +     +I  G+ + H      ++H D+KPQN+L+DN    K++DFGL++   +  +  TH ++  T  Y APE
Sbjct:    8 EKIGEGTYGVVYKGRHKS-TGQVVAMKKI-RLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMD-LKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPVRVYTHEVV--TLWYRAPE 173          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 57/174 (32.76%), Postives = 98/174 (56.32%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDW--NLRVRISL-EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPE 691
            E++G G++G+VYKG  K A+G+ +A+KK+ RL  E E    +   E+S +    H N+V LL    +     L++EF+    L   + +IP   +   + V+  L +I +G+V+ H      ++H D+KPQN+L+D+    K++DFGL++   +  +  TH ++  T  Y APE
Sbjct:    8 EKIGEGTYGVVYKGRHK-ATGQVVAMKKI-RLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMD-LKKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSR---RVLHRDLKPQNLLIDSKGVIKLADFGLARAFGIPVRVYTHEVV--TLWYRAPE 173          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y9851_DICDI (Probable serine/threonine-protein kinase DDB_G0275165 OS=Dictyostelium discoideum GN=DDB_G0275165 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 58/193 (30.05%), Postives = 96/193 (49.74%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREF-----KSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRGYVAPE 691
            R+  Y+E+K         +G G FG VY+GVL   +GK I +KK+     +  R+      + E+  +    H N+++  G  ++  +  L+ E +  G L     N    I    W L+V+I+ +IA  + YLHE     +IH D+K  N+L+   +  K+ D GL++ +  D+S    M I GT  ++APE
Sbjct:   14 RIVDYDEIKFDPLSI---IGSGGFGKVYQGVL---NGKEIGIKKITISDNDPNRDILLKFLEREIYTLKMLSHPNVIKFYGIAEKERSLFLLTELVSGGDLHWYIKNKSIDIT---WKLKVKIARDIAASMAYLHEN---GVIHRDLKSTNLLVAENWVIKVCDMGLARKM--DKSEKSKMTICGTDDWMAPE 192          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: ROCO5_DICDI (Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum GN=roco5 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 52/159 (32.70%), Postives = 89/159 (55.97%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLD------RLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTL-ANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSA----KISDFGLSKLLLS 634
            E++G G FGIVYKG L+   G+ +A+K++         A E  REF+ EV       H ++V L G+C +     +V E++ NGTL ++L  +     W L+++I++ IA  + ++H      I H D+K  NIL+ +  +A    K+SDFG ++ +++
Sbjct: 2179 EKVGEGGFGIVYKGKLR---GQLVAIKQITIDSGQAEAASEIYREFRREVWLSNTLTHPSIVSLKGYCLDPC--CIVMEYIPNGTLYSHLRKSFSSITWQLKLKIAINIADAIKHMH-GFTPKICHRDLKSPNILMLSDMNAAVVCKVSDFGETRAVVT 2331          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: RIPK1_HUMAN (Receptor-interacting serine/threonine-protein kinase 1 OS=Homo sapiens GN=RIPK1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 61/194 (31.44%), Postives = 88/194 (45.36%), Query Frame = 2
Query:  152 SYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLS--KLLLSDQSRTHTMIR----------GTRGYVAPE 691
            S N +K  +  F E  EL  G FG V     ++     +          E       E   + R  H  +V+LLG   E     LV E+M  G L +++ A      +++ RI LEI  G+ YLH +    +IH D+KP+NIL+DN F  KI+D GL+  K+     +  H  +R          GT  Y+APE
Sbjct:    6 SLNVIKMKSSDFLESAELDSGGFGKVSLCFHRTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEMSTPLSVKGRIILEIIEGMCYLHGK---GVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNELREVDGTAKKNGGTLYYMAPE 196          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: JAK2_HUMAN (Tyrosine-protein kinase JAK2 OS=Homo sapiens GN=JAK2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 49/158 (31.01%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEA--LNRLLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ 640
            F ++LG+G+FG V       L+  +G+ +AVKKL    +E  R+F+ E+  +    H N+V+  G C  A   N  L+ E++  G+L + +    +   +++ ++ + +I +G+ YL  +     IH D+  +NIL++N    KI DFGL+K+L  D+
Sbjct:  851 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 1005          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: DLK1_CAEBR (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLA------NLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            E LG GS G V+ G  ++   + +AVKK+++L +       +E+  +    HKN+++ LG C ++    +V E+   G L       NLI      DW        EIA G+ YLH+     +IH D+K  NIL+    S KI DFG S L   + S T     GT  ++APE ++
Sbjct:   66 EWLGSGSQGAVFHGQYEN---RTVAVKKVNQLKE-------TEIKHLRHLRHKNIIEFLGVCSKSPCYCIVMEYCPKGQLCTVLRQKNLITRQMFSDW------VKEIADGMHYLHQN---KVIHRDLKSPNILISAEDSIKICDFGTSHLQKKNDS-TMMSFCGTVSWMAPEMIK 221          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 51/150 (34.00%), Postives = 87/150 (58.00%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDW--NLRVRISL-EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            E++G G++G+VYKG  K A+G+ +A+KK+ RL  E E    +   E+S +    H N+V LL    +     L++EF+    L   + +IP   +   + V+  L +I +G+V+ H      ++H D+KPQN+L+DN    K++DFGL++
Sbjct:    8 EKIGEGTYGVVYKGRHK-ATGQVVAMKKI-RLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMD-LKKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLAR 151          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_ORYLU4.236e-1332.18Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA4.236e-1332.18Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA4.236e-1332.18Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2A_XENLA4.236e-1332.76Cell division control protein 2-A OS=Xenopus laevi... [more]
Y9851_DICDI5.532e-1330.05Probable serine/threonine-protein kinase DDB_G0275... [more]
ROCO5_DICDI5.532e-1332.70Probable serine/threonine-protein kinase roco5 OS=... [more]
RIPK1_HUMAN5.532e-1331.44Receptor-interacting serine/threonine-protein kina... [more]
JAK2_HUMAN5.532e-1331.01Tyrosine-protein kinase JAK2 OS=Homo sapiens GN=JA... [more]
DLK1_CAEBR5.532e-1332.95Mitogen-activated protein kinase kinase kinase dlk... [more]
CDC2B_XENLA5.532e-1334.00Cell division control protein 2-B OS=Xenopus laevi... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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