FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: TESK2_RAT (Dual specificity testis-specific protein kinase 2 OS=Rattus norvegicus GN=Tesk2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 57/202 (28.22%), Postives = 107/202 (52.97%), Query Frame = 2
Query:  104 NNVQDSSTSETNLR--LFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRGYVAPE 691
            N VQ    S ++ R  + +++ L       +E++G G F  V+K V   ASG+ +A+K ++ L+  R    K E+  + R  H N+++ +G C        + E++ +G L  L+ +     W +RV+++ +IA GL YLH +    I H D+  +N L+   +N +SA ++DFGL++ +      +  + + G+  ++APE
Sbjct:   31 NTVQVGRVSSSSYRAIISAFSRLTSLDDFTREKIGSGFFSEVFK-VRHRASGQVMALK-MNTLSSNRANLLK-EMQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNLEQLLDSNLYLPWTVRVKLAYDIAVGLSYLHFK---GIFHRDLTSKNCLIKRDENGYSAVVADFGLAEKIPDASIGSEKLAVVGSPFWMAPE 226          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: STK6_HUMAN (Serine/threonine-protein kinase 6 OS=Homo sapiens GN=AURKA PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 55/178 (30.90%), Postives = 85/178 (47.75%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            LG+G FG VY    K  S   +A+K L +   E+   E + + EV       H N+++L G+  +A    L+ E+   GT+   +  + K D         E+A  L Y H +    +IH DIKP+N+LL +    KI+DFG S   +   S   T + GT  Y+ PE ++  +   K
Sbjct:  139 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 309          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: ROR1_DROME (Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster GN=Ror PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLAN-LIFAIPKPDWNLR----VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS 634
            F EELG G+FG VYKG L   +   I  A+K L   A  + +++FK E+  I    H+N+V +LG         +++E+M NG L   LI   P    +L     ++I+L+I+ G+ YL        +H D+  +N L++     KISDFGLS+ + S
Sbjct:  412 FLEELGEGAFGKVYKGQLLQPNKTTITVAIKALKENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQIALQISEGMQYLSAH---HYVHRDLAARNCLVNEGLVVKISDFGLSRDIYS 566          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PKNK_MYCTU (Probable serine/threonine-protein kinase pknK OS=Mycobacterium tuberculosis GN=pknK PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 60/180 (33.33%), Postives = 94/180 (52.22%), Query Frame = 2
Query:  161 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDR-LAQEREREFKSEVSAIGR-THHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            EL EA     EE+GRG FG+VY+ V  S   +A+AVK L   L ++    F  E  A+GR + H ++V +L     A  R  +V  +    +L  LI      DW   + I +++A  L   H    V  +H D+KP NILL +Y   +++DFG++++    ++ T  +I G+  + APE
Sbjct:   20 ELLEAGFDNVEEIGRGGFGVVYRCVQPSLD-RAVAVKVLSTDLDRDNLERFLREQRAMGRLSGHPHIVTVLQVGVLAGGRPFIVMPYHAKNSLETLIRRHGPLDWRETLSIGVKLAGALEAAHR---VGTLHRDVKPGNILLTDYGEPQLTDFGIARIAGGFETAT-GVIAGSPAFTAPE 194          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PKNK_MYCBO (Probable serine/threonine-protein kinase pknK OS=Mycobacterium bovis GN=pknK PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 60/180 (33.33%), Postives = 94/180 (52.22%), Query Frame = 2
Query:  161 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDR-LAQEREREFKSEVSAIGR-THHKNLVQLLGFCDEALNR-LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            EL EA     EE+GRG FG+VY+ V  S   +A+AVK L   L ++    F  E  A+GR + H ++V +L     A  R  +V  +    +L  LI      DW   + I +++A  L   H    V  +H D+KP NILL +Y   +++DFG++++    ++ T  +I G+  + APE
Sbjct:   20 ELLEAGFDNVEEIGRGGFGVVYRCVQPSLD-RAVAVKVLSTDLDRDNLERFLREQRAMGRLSGHPHIVTVLQVGVLAGGRPFIVMPYHAKNSLETLIRRHGPLDWRETLSIGVKLAGALEAAHR---VGTLHRDVKPGNILLTDYGEPQLTDFGIARIAGGFETAT-GVIAGSPAFTAPE 194          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MYLK_BOVIN (Myosin light chain kinase, smooth muscle OS=Bos taurus GN=MYLK PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 57/200 (28.50%), Postives = 100/200 (50.00%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKIS--DFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            D    E + R  + N  ++ +  +  +E LG G FG V++ V K  +GK  A K     + + +   + E+S +   HH  LVQ +   +E  N ++V E +  G L   I      D+ L     ++   +I+ G+ Y+H++    I+H D+KP+NI+  N    +I   DFGL++ L  + + +  ++ GT  +VAPE
Sbjct:  702 DEKEPEVDYRTVTVNTEQKVSDFYDIEERLGSGKFGQVFRLVEKK-TGKIWAGKFFKAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERII---DEDFELTERECIKYMKQISEGVEYIHKQ---GIVHLDLKPENIMCVNKTGTRIKLIDFGLARRL--ENAGSLKVLFGTPEFVAPE 892          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MP2K1_DICDI (Dual specificity mitogen-activated protein kinase kinase 1 OS=Dictyostelium discoideum GN=mekA PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 59/171 (34.50%), Postives = 92/171 (53.80%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNR---LLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            LGRG+ G+V K      SG  IA+K +    QE  R  K  +  +   H  +   ++ F D         +  EFM  G+L++++     IP+P   +  +I+ ++ +GLVYLH + +  +IH DIKP NIL++N   AKI+DFG+S  L    S+  T + GT  Y++PE
Sbjct:  298 LGRGAGGVV-KLAYHETSGTYIALKVITLDIQENIR--KQIILELKTLHKTSYPYIVSFYDAFYTEGSIFIALEFMELGSLSDIMKKTSTIPEP---VLGKIAFQVLQGLVYLHRKLH--LIHRDIKPSNILVNNKGEAKIADFGVSGQLQHTLSKAVTWV-GTVTYMSPE 459          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MINK1_MOUSE (Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 65/191 (34.03%), Postives = 98/191 (51.31%), Query Frame = 2
Query:  164 LKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR-THHKNLVQLLGFC--------DEALNRLLVYEFMGNGTLANLIFAIP----KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            L++  G F+  E +G G++G VYKG     +G+  A+K +D + ++ E E K E++ + + +HH+N+    G          D+ L   LV EF G G++ +L+        K D      I  EI RGL +LH      +IH DIK QN+LL      K+ DFG+S  L     R +T I GT  ++APE
Sbjct:   18 LRDPAGIFELVEVVGNGTYGQVYKG-RHVKTGQLAAIKVMD-VTEDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQL--WLVMEFCGAGSVTDLVKNTKGNALKED--CIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPE 198          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MINK1_HUMAN (Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 65/191 (34.03%), Postives = 98/191 (51.31%), Query Frame = 2
Query:  164 LKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR-THHKNLVQLLGFC--------DEALNRLLVYEFMGNGTLANLIFAIP----KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            L++  G F+  E +G G++G VYKG     +G+  A+K +D + ++ E E K E++ + + +HH+N+    G          D+ L   LV EF G G++ +L+        K D      I  EI RGL +LH      +IH DIK QN+LL      K+ DFG+S  L     R +T I GT  ++APE
Sbjct:   18 LRDPAGIFELVEVVGNGTYGQVYKG-RHVKTGQLAAIKVMD-VTEDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQL--WLVMEFCGAGSVTDLVKNTKGNALKED--CIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPE 198          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: INSRR_MOUSE (Insulin receptor-related protein OS=Mus musculus GN=Insrr PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 52/183 (28.42%), Postives = 93/183 (50.82%), Query Frame = 2
Query:  194 ELGRGSFGIVYKGVLK----SASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWV 697
            ELG+GSFG+VY+G+ +          +A+K ++ LA  RER EF  E S +      ++V+LLG   +    L++ E M  G L + + +          +P+P  +  ++++ EIA G+ YL  +     +H D+  +N ++   F+ KI DFG+++    D   T    +G +G +   W+
Sbjct:  984 ELGQGSFGMVYEGLARGLEAGEESTPVALKTVNELASARERVEFLKEASVMKAFKCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSHLRSLRPEAENNPGLPQPALSDMIQMAGEIADGMAYLAAK---KFVHRDLAARNCMVSQDFTVKIGDFGMTR----DVYETDYYRKGGKGLLPVRWM 1159          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TESK2_RAT7.225e-1328.22Dual specificity testis-specific protein kinase 2 ... [more]
STK6_HUMAN7.225e-1330.90Serine/threonine-protein kinase 6 OS=Homo sapiens ... [more]
ROR1_DROME7.225e-1334.81Tyrosine-protein kinase transmembrane receptor Ror... [more]
PKNK_MYCTU7.225e-1333.33Probable serine/threonine-protein kinase pknK OS=M... [more]
PKNK_MYCBO7.225e-1333.33Probable serine/threonine-protein kinase pknK OS=M... [more]
MYLK_BOVIN7.225e-1328.50Myosin light chain kinase, smooth muscle OS=Bos ta... [more]
MP2K1_DICDI7.225e-1334.50Dual specificity mitogen-activated protein kinase ... [more]
MINK1_MOUSE7.225e-1334.03Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 P... [more]
MINK1_HUMAN7.225e-1334.03Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 P... [more]
INSRR_MOUSE7.225e-1328.42Insulin receptor-related protein OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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